Protein–RNA interactions for Protein: Q9Y2W7

KCNIP3, Calsenilin, humanhuman

Predictions only

Length 256 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNIP3Q9Y2W7 AC126755.2-201ENST00000545114 1522 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
KCNIP3Q9Y2W7 ABCA6-206ENST00000590645 1511 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
KCNIP3Q9Y2W7 RXFP1-203ENST00000343542 2130 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
KCNIP3Q9Y2W7 RABL3-201ENST00000273375 3883 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
KCNIP3Q9Y2W7 MTERF1-203ENST00000419292 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC4.82□□□□□ -1.64
KCNIP3Q9Y2W7 AC025428.2-201ENST00000435367 2672 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
KCNIP3Q9Y2W7 MEMO1-202ENST00000379383 1498 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
KCNIP3Q9Y2W7 SMNDC1-202ENST00000369603 4341 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
KCNIP3Q9Y2W7 EEF1A1P33-201ENST00000554413 1362 ntBASIC4.82□□□□□ -1.64
KCNIP3Q9Y2W7 FAM204A-203ENST00000369183 13889 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
KCNIP3Q9Y2W7 FBXL21-201ENST00000297158 1305 ntBASIC4.82□□□□□ -1.64
KCNIP3Q9Y2W7 AC117409.1-201ENST00000470499 1310 ntBASIC4.82□□□□□ -1.64
KCNIP3Q9Y2W7 BCLAF1-201ENST00000353331 7110 ntTSL 5 BASIC4.82□□□□□ -1.64
KCNIP3Q9Y2W7 TRDC-201ENST00000390477 720 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
KCNIP3Q9Y2W7 AL157702.1-201ENST00000398764 426 ntBASIC4.82□□□□□ -1.64
KCNIP3Q9Y2W7 RN7SKP286-201ENST00000410894 299 ntBASIC4.82□□□□□ -1.64
KCNIP3Q9Y2W7 NPM1P40-201ENST00000412758 733 ntBASIC4.82□□□□□ -1.64
KCNIP3Q9Y2W7 AL133482.1-201ENST00000415988 498 ntBASIC4.82□□□□□ -1.64
KCNIP3Q9Y2W7 OR13Z1P-201ENST00000416141 834 ntBASIC4.82□□□□□ -1.64
KCNIP3Q9Y2W7 AL139120.1-201ENST00000443652 358 ntTSL 3 BASIC4.82□□□□□ -1.64
KCNIP3Q9Y2W7 NDUFB3-204ENST00000454214 547 ntAPPRIS P1 TSL 2 BASIC4.82□□□□□ -1.64
KCNIP3Q9Y2W7 EIF3LP2-201ENST00000457262 807 ntBASIC4.82□□□□□ -1.64
KCNIP3Q9Y2W7 LINC01006-207ENST00000458645 738 ntTSL 4 BASIC4.82□□□□□ -1.64
KCNIP3Q9Y2W7 AC078828.1-201ENST00000471993 458 ntTSL 3 BASIC4.82□□□□□ -1.64
KCNIP3Q9Y2W7 LINC02492-201ENST00000502952 564 ntTSL 5 BASIC4.82□□□□□ -1.64
KCNIP3Q9Y2W7 AC009567.2-201ENST00000502989 349 ntBASIC4.82□□□□□ -1.64
KCNIP3Q9Y2W7 MOCS2-205ENST00000508922 1210 ntTSL 5 BASIC4.82□□□□□ -1.64
KCNIP3Q9Y2W7 NREP-217ENST00000509025 987 ntTSL 3 BASIC4.82□□□□□ -1.64
KCNIP3Q9Y2W7 NREP-223ENST00000515855 801 ntTSL 4 BASIC4.82□□□□□ -1.64
KCNIP3Q9Y2W7 RNA5SP206-201ENST00000516703 121 ntBASIC4.82□□□□□ -1.64
KCNIP3Q9Y2W7 LINC00861-202ENST00000517869 606 ntTSL 5 BASIC4.82□□□□□ -1.64
KCNIP3Q9Y2W7 LGALS8-217ENST00000525042 903 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
KCNIP3Q9Y2W7 AC234917.1-201ENST00000534006 316 ntTSL 3 BASIC4.82□□□□□ -1.64
KCNIP3Q9Y2W7 AC124891.1-201ENST00000536322 519 ntBASIC4.82□□□□□ -1.64
KCNIP3Q9Y2W7 HNF1A-AS1-203ENST00000537361 659 ntTSL 3 BASIC4.82□□□□□ -1.64
KCNIP3Q9Y2W7 PSMA4-209ENST00000559082 1094 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
KCNIP3Q9Y2W7 C15orf41-204ENST00000562877 764 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
KCNIP3Q9Y2W7 TTC39C-204ENST00000577185 533 ntTSL 3 BASIC4.82□□□□□ -1.64
KCNIP3Q9Y2W7 AC006120.1-201ENST00000579375 546 ntBASIC4.82□□□□□ -1.64
KCNIP3Q9Y2W7 AC233702.9-201ENST00000581528 203 ntBASIC4.82□□□□□ -1.64
KCNIP3Q9Y2W7 AC008507.3-201ENST00000585753 472 ntBASIC4.82□□□□□ -1.64
KCNIP3Q9Y2W7 CT45A1-201ENST00000594117 1087 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
KCNIP3Q9Y2W7 AC010615.3-201ENST00000597319 394 ntBASIC4.82□□□□□ -1.64
KCNIP3Q9Y2W7 LINC01050-201ENST00000604485 760 ntTSL 3 BASIC4.82□□□□□ -1.64
KCNIP3Q9Y2W7 AC117503.3-201ENST00000623811 601 ntBASIC4.82□□□□□ -1.64
KCNIP3Q9Y2W7 AC141930.3-201ENST00000640435 762 ntTSL 5 BASIC4.82□□□□□ -1.64
KCNIP3Q9Y2W7 Z94721.2-201ENST00000609590 5310 ntTSL 2 BASIC4.82□□□□□ -1.64
KCNIP3Q9Y2W7 KLHL28-201ENST00000355081 2177 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
KCNIP3Q9Y2W7 IPO5-201ENST00000261574 6003 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
KCNIP3Q9Y2W7 MIR4500HG-201ENST00000436290 1675 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
KCNIP3Q9Y2W7 RNF111-212ENST00000561186 4536 ntTSL 2 BASIC4.82□□□□□ -1.64
KCNIP3Q9Y2W7 THAP12P8-201ENST00000447914 2115 ntBASIC4.82□□□□□ -1.64
KCNIP3Q9Y2W7 ADGRG4-201ENST00000370652 9820 ntAPPRIS P2 TSL 5 BASIC4.82□□□□□ -1.64
KCNIP3Q9Y2W7 MFSD8-239ENST00000641590 2479 ntBASIC4.82□□□□□ -1.64
KCNIP3Q9Y2W7 LIMA1-215ENST00000552823 3254 ntAPPRIS ALT2 TSL 2 BASIC4.82□□□□□ -1.64
KCNIP3Q9Y2W7 ANXA1-201ENST00000257497 1509 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
KCNIP3Q9Y2W7 KTN1-202ENST00000395308 4134 ntAPPRIS ALT2 TSL 1 (best) BASIC4.82□□□□□ -1.64
KCNIP3Q9Y2W7 CLUL1-213ENST00000620089 1947 ntTSL 5 BASIC4.82□□□□□ -1.64
KCNIP3Q9Y2W7 RAB18-209ENST00000621805 4894 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
KCNIP3Q9Y2W7 DCSTAMP-208ENST00000622554 1471 ntTSL 5 BASIC4.81□□□□□ -1.64
KCNIP3Q9Y2W7 TOX3-202ENST00000407228 3124 ntAPPRIS ALT2 TSL 2 BASIC4.81□□□□□ -1.64
KCNIP3Q9Y2W7 ZNF571-203ENST00000451802 2265 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
KCNIP3Q9Y2W7 FANCD2P2-201ENST00000437591 1400 ntBASIC4.81□□□□□ -1.64
KCNIP3Q9Y2W7 DIAPH3-208ENST00000498416 2249 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
KCNIP3Q9Y2W7 TNFSF4-202ENST00000367718 3429 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
KCNIP3Q9Y2W7 RBBP6-202ENST00000348022 5739 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
KCNIP3Q9Y2W7 RNF217-202ENST00000368414 1771 ntTSL 2 BASIC4.81□□□□□ -1.64
KCNIP3Q9Y2W7 DTNA-221ENST00000591182 1787 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
KCNIP3Q9Y2W7 ANAPC1P1-201ENST00000426186 2145 ntBASIC4.81□□□□□ -1.64
KCNIP3Q9Y2W7 EIF3EP1-201ENST00000433978 1316 ntBASIC4.81□□□□□ -1.64
KCNIP3Q9Y2W7 AC245100.2-201ENST00000454544 1679 ntBASIC4.81□□□□□ -1.64
KCNIP3Q9Y2W7 BACH1-201ENST00000286800 5669 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
KCNIP3Q9Y2W7 RPGRIP1L-212ENST00000621565 6038 ntAPPRIS ALT1 TSL 1 (best) BASIC4.81□□□□□ -1.64
KCNIP3Q9Y2W7 HSPB11-202ENST00000371376 765 ntTSL 3 BASIC4.81□□□□□ -1.64
KCNIP3Q9Y2W7 ZRSR2-202ENST00000380308 744 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
KCNIP3Q9Y2W7 SNRPEP6-201ENST00000407465 277 ntBASIC4.81□□□□□ -1.64
KCNIP3Q9Y2W7 AC096921.1-201ENST00000411661 375 ntBASIC4.81□□□□□ -1.64
KCNIP3Q9Y2W7 LIX1L-AS1-202ENST00000412239 570 ntTSL 2 BASIC4.81□□□□□ -1.64
KCNIP3Q9Y2W7 AC022173.1-201ENST00000418554 577 ntTSL 4 BASIC4.81□□□□□ -1.64
KCNIP3Q9Y2W7 AP006748.1-201ENST00000418874 346 ntTSL 3 BASIC4.81□□□□□ -1.64
KCNIP3Q9Y2W7 AC104076.1-201ENST00000428080 265 ntTSL 3 BASIC4.81□□□□□ -1.64
KCNIP3Q9Y2W7 PSMD10P2-201ENST00000432890 672 ntBASIC4.81□□□□□ -1.64
KCNIP3Q9Y2W7 RAB9AP5-201ENST00000437794 597 ntBASIC4.81□□□□□ -1.64
KCNIP3Q9Y2W7 NPM1P33-201ENST00000438918 872 ntBASIC4.81□□□□□ -1.64
KCNIP3Q9Y2W7 RAB9AP2-201ENST00000443911 597 ntBASIC4.81□□□□□ -1.64
KCNIP3Q9Y2W7 LINC02210-201ENST00000444561 288 ntBASIC4.81□□□□□ -1.64
KCNIP3Q9Y2W7 AL133319.1-201ENST00000447848 777 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
KCNIP3Q9Y2W7 AC009244.1-201ENST00000450566 258 ntBASIC4.81□□□□□ -1.64
KCNIP3Q9Y2W7 AL356157.1-201ENST00000456722 732 ntTSL 3 BASIC4.81□□□□□ -1.64
KCNIP3Q9Y2W7 RN7SL39P-201ENST00000462264 297 ntBASIC4.81□□□□□ -1.64
KCNIP3Q9Y2W7 RN7SL83P-201ENST00000468131 297 ntBASIC4.81□□□□□ -1.64
KCNIP3Q9Y2W7 LINC02383-201ENST00000508563 582 ntTSL 3 BASIC4.81□□□□□ -1.64
KCNIP3Q9Y2W7 AC017091.1-202ENST00000510941 504 ntTSL 3 BASIC4.81□□□□□ -1.64
KCNIP3Q9Y2W7 C8orf44-205ENST00000521889 598 ntAPPRIS ALT2 TSL 3 BASIC4.81□□□□□ -1.64
KCNIP3Q9Y2W7 OR4A17P-201ENST00000526032 904 ntBASIC4.81□□□□□ -1.64
KCNIP3Q9Y2W7 AC130366.1-201ENST00000526505 1192 ntBASIC4.81□□□□□ -1.64
KCNIP3Q9Y2W7 AP001528.2-201ENST00000528660 1156 ntTSL 5 BASIC4.81□□□□□ -1.64
KCNIP3Q9Y2W7 LRP4-AS1-202ENST00000531719 731 ntTSL 4 BASIC4.81□□□□□ -1.64
KCNIP3Q9Y2W7 AC026894.1-201ENST00000532930 850 ntTSL 3 BASIC4.81□□□□□ -1.64
KCNIP3Q9Y2W7 ASB8-202ENST00000535055 657 ntTSL 2 BASIC4.81□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 83.4 ms