Protein–RNA interactions for Protein: Q9UPT8

ZC3H4, Zinc finger CCCH domain-containing protein 4, humanhuman

Known RBP Predictions only

Length 1,303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H4Q9UPT8 AL391994.1-201ENST00000254724 282 ntBASIC8.62□□□□□ -1.03
ZC3H4Q9UPT8 OR6C75-201ENST00000343399 939 ntAPPRIS P1 BASIC8.62□□□□□ -1.03
ZC3H4Q9UPT8 snoZ40.1-201ENST00000364540 72 ntBASIC8.62□□□□□ -1.03
ZC3H4Q9UPT8 RNA5SP512-201ENST00000364550 120 ntBASIC8.62□□□□□ -1.03
ZC3H4Q9UPT8 ZNF669-202ENST00000366500 489 ntTSL 3 BASIC8.62□□□□□ -1.03
ZC3H4Q9UPT8 IGBP1-AS2-201ENST00000403371 513 ntTSL 3 BASIC8.62□□□□□ -1.03
ZC3H4Q9UPT8 NPM1P38-201ENST00000403835 865 ntBASIC8.62□□□□□ -1.03
ZC3H4Q9UPT8 PRELID1P2-201ENST00000407805 396 ntBASIC8.62□□□□□ -1.03
ZC3H4Q9UPT8 SLC8A1-AS1-201ENST00000413479 800 ntTSL 5 BASIC8.62□□□□□ -1.03
ZC3H4Q9UPT8 AL353651.1-201ENST00000415629 355 ntTSL 5 BASIC8.62□□□□□ -1.03
ZC3H4Q9UPT8 AC068535.1-201ENST00000416008 471 ntTSL 3 BASIC8.62□□□□□ -1.03
ZC3H4Q9UPT8 AC245052.5-201ENST00000416320 649 ntBASIC8.62□□□□□ -1.03
ZC3H4Q9UPT8 ISCA1P1-201ENST00000426679 387 ntBASIC8.62□□□□□ -1.03
ZC3H4Q9UPT8 AC096677.2-201ENST00000430471 598 ntTSL 5 BASIC8.62□□□□□ -1.03
ZC3H4Q9UPT8 RPL7L1P11-201ENST00000446092 721 ntBASIC8.62□□□□□ -1.03
ZC3H4Q9UPT8 FDX1P2-201ENST00000450769 375 ntBASIC8.62□□□□□ -1.03
ZC3H4Q9UPT8 AC092164.1-201ENST00000452212 726 ntTSL 2 BASIC8.62□□□□□ -1.03
ZC3H4Q9UPT8 Z83838.1-202ENST00000456225 839 ntBASIC8.62□□□□□ -1.03
ZC3H4Q9UPT8 AC041039.1-201ENST00000485656 536 ntBASIC8.62□□□□□ -1.03
ZC3H4Q9UPT8 HMGB1P36-201ENST00000487709 576 ntBASIC8.62□□□□□ -1.03
ZC3H4Q9UPT8 AC104090.1-201ENST00000506341 1171 ntBASIC8.62□□□□□ -1.03
ZC3H4Q9UPT8 TEMN3-AS1-201ENST00000510211 401 ntTSL 3 BASIC8.62□□□□□ -1.03
ZC3H4Q9UPT8 IGLVIV-64-201ENST00000518581 301 ntBASIC8.62□□□□□ -1.03
ZC3H4Q9UPT8 AP003548.1-201ENST00000523862 711 ntTSL 3 BASIC8.62□□□□□ -1.03
ZC3H4Q9UPT8 C14orf105-210ENST00000534126 1030 ntAPPRIS ALT1 TSL 1 (best) BASIC8.62□□□□□ -1.03
ZC3H4Q9UPT8 AC022509.3-201ENST00000535914 436 ntTSL 3 BASIC8.62□□□□□ -1.03
ZC3H4Q9UPT8 NPM1P5-201ENST00000557228 838 ntBASIC8.62□□□□□ -1.03
ZC3H4Q9UPT8 AC012414.6-201ENST00000568241 401 ntBASIC8.62□□□□□ -1.03
ZC3H4Q9UPT8 AC007495.1-203ENST00000569025 888 ntTSL 5 BASIC8.62□□□□□ -1.03
ZC3H4Q9UPT8 AC012146.2-201ENST00000576545 416 ntBASIC8.62□□□□□ -1.03
ZC3H4Q9UPT8 AP005262.1-201ENST00000582646 997 ntBASIC8.62□□□□□ -1.03
ZC3H4Q9UPT8 AC011444.3-201ENST00000588342 325 ntTSL 3 BASIC8.62□□□□□ -1.03
ZC3H4Q9UPT8 AL136084.2-222ENST00000589105 885 ntTSL 5 BASIC8.62□□□□□ -1.03
ZC3H4Q9UPT8 AC012175.1-201ENST00000603755 531 ntBASIC8.62□□□□□ -1.03
ZC3H4Q9UPT8 AC007038.2-201ENST00000608095 740 ntBASIC8.62□□□□□ -1.03
ZC3H4Q9UPT8 RMST_5.1-201ENST00000618704 126 ntBASIC8.62□□□□□ -1.03
ZC3H4Q9UPT8 MIR4278-201ENST00000636094 69 ntBASIC8.62□□□□□ -1.03
ZC3H4Q9UPT8 AC090220.1-201ENST00000593078 1699 ntBASIC8.62□□□□□ -1.03
ZC3H4Q9UPT8 PROM1-206ENST00000505450 4349 ntAPPRIS ALT2 TSL 1 (best) BASIC8.62□□□□□ -1.03
ZC3H4Q9UPT8 TIMM9-202ENST00000395159 1336 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
ZC3H4Q9UPT8 IGSF11-201ENST00000354673 3206 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
ZC3H4Q9UPT8 NF1P2-201ENST00000556855 2505 ntBASIC8.62□□□□□ -1.03
ZC3H4Q9UPT8 CD163-203ENST00000432237 3701 ntAPPRIS ALT2 TSL 1 (best) BASIC8.62□□□□□ -1.03
ZC3H4Q9UPT8 HELB-201ENST00000247815 12866 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
ZC3H4Q9UPT8 AL132656.2-201ENST00000482985 1837 ntTSL 5 BASIC8.62□□□□□ -1.03
ZC3H4Q9UPT8 LRRC37A3-202ENST00000334962 2654 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
ZC3H4Q9UPT8 GJB7-203ENST00000525899 2281 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
ZC3H4Q9UPT8 NCR3LG1-201ENST00000338965 6438 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
ZC3H4Q9UPT8 LINC01375-201ENST00000428485 1860 ntTSL 2 BASIC8.62□□□□□ -1.03
ZC3H4Q9UPT8 ST7-203ENST00000393443 2360 ntTSL 2 BASIC8.62□□□□□ -1.03
ZC3H4Q9UPT8 SRSF11-202ENST00000370950 3784 ntAPPRIS P3 TSL 1 (best) BASIC8.62□□□□□ -1.03
ZC3H4Q9UPT8 CFAP61-205ENST00000377306 2017 ntTSL 5 BASIC8.62□□□□□ -1.03
ZC3H4Q9UPT8 NPIPB6-201ENST00000532254 2016 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
ZC3H4Q9UPT8 OR8H1-203ENST00000641600 2927 ntAPPRIS P2 BASIC8.62□□□□□ -1.03
ZC3H4Q9UPT8 LRIG2-201ENST00000361127 11555 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
ZC3H4Q9UPT8 ERICH3-202ENST00000420661 2068 ntAPPRIS ALT2 TSL 1 (best) BASIC8.61□□□□□ -1.03
ZC3H4Q9UPT8 TTC39DP-201ENST00000416781 1688 ntBASIC8.61□□□□□ -1.03
ZC3H4Q9UPT8 PIGN-231ENST00000639174 4095 ntTSL 5 BASIC8.61□□□□□ -1.03
ZC3H4Q9UPT8 HELLS-205ENST00000394036 3131 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
ZC3H4Q9UPT8 ZNF214-201ENST00000278314 2681 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
ZC3H4Q9UPT8 AC116366.1-201ENST00000443093 3730 ntTSL 5 BASIC8.61□□□□□ -1.03
ZC3H4Q9UPT8 KIAA1024-201ENST00000305428 6732 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
ZC3H4Q9UPT8 GCNA-202ENST00000373696 2791 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
ZC3H4Q9UPT8 AC004690.2-201ENST00000472838 1754 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
ZC3H4Q9UPT8 DEFB119-201ENST00000339144 484 ntAPPRIS ALT2 TSL 1 (best) BASIC8.61□□□□□ -1.03
ZC3H4Q9UPT8 RNA5SP472-201ENST00000363868 119 ntBASIC8.61□□□□□ -1.03
ZC3H4Q9UPT8 RNU6-1011P-201ENST00000384668 107 ntBASIC8.61□□□□□ -1.03
ZC3H4Q9UPT8 AL359715.1-201ENST00000404330 555 ntBASIC8.61□□□□□ -1.03
ZC3H4Q9UPT8 RNA5SP198-201ENST00000410376 127 ntBASIC8.61□□□□□ -1.03
ZC3H4Q9UPT8 AJ239322.2-201ENST00000421696 575 ntTSL 5 BASIC8.61□□□□□ -1.03
ZC3H4Q9UPT8 AL353801.1-201ENST00000425541 425 ntTSL 3 BASIC8.61□□□□□ -1.03
ZC3H4Q9UPT8 AC010975.2-201ENST00000427781 588 ntBASIC8.61□□□□□ -1.03
ZC3H4Q9UPT8 RPL34P27-201ENST00000428810 349 ntBASIC8.61□□□□□ -1.03
ZC3H4Q9UPT8 AC007679.3-201ENST00000434035 414 ntBASIC8.61□□□□□ -1.03
ZC3H4Q9UPT8 AC104698.1-201ENST00000435671 276 ntBASIC8.61□□□□□ -1.03
ZC3H4Q9UPT8 AL445465.1-204ENST00000440220 447 ntTSL 3 BASIC8.61□□□□□ -1.03
ZC3H4Q9UPT8 LINC01789-201ENST00000443123 860 ntTSL 5 BASIC8.61□□□□□ -1.03
ZC3H4Q9UPT8 MTOR-AS1-202ENST00000445982 705 ntTSL 5 BASIC8.61□□□□□ -1.03
ZC3H4Q9UPT8 TPT1P14-201ENST00000448018 505 ntBASIC8.61□□□□□ -1.03
ZC3H4Q9UPT8 LINC01376-204ENST00000449124 626 ntTSL 2 BASIC8.61□□□□□ -1.03
ZC3H4Q9UPT8 AC104849.1-201ENST00000462623 405 ntBASIC8.61□□□□□ -1.03
ZC3H4Q9UPT8 RPL34P34-201ENST00000465389 354 ntBASIC8.61□□□□□ -1.03
ZC3H4Q9UPT8 AC099340.1-201ENST00000475247 599 ntBASIC8.61□□□□□ -1.03
ZC3H4Q9UPT8 NDUFB2-215ENST00000482954 544 ntTSL 3 BASIC8.61□□□□□ -1.03
ZC3H4Q9UPT8 CBX1-205ENST00000495350 550 ntTSL 2 BASIC8.61□□□□□ -1.03
ZC3H4Q9UPT8 SCOC-205ENST00000502535 679 ntAPPRIS ALT1 TSL 3 BASIC8.61□□□□□ -1.03
ZC3H4Q9UPT8 AC098799.2-201ENST00000509466 868 ntBASIC8.61□□□□□ -1.03
ZC3H4Q9UPT8 HMGB3P13-201ENST00000511263 607 ntBASIC8.61□□□□□ -1.03
ZC3H4Q9UPT8 AC027031.1-201ENST00000517318 489 ntTSL 3 BASIC8.61□□□□□ -1.03
ZC3H4Q9UPT8 AC087752.2-201ENST00000521219 281 ntBASIC8.61□□□□□ -1.03
ZC3H4Q9UPT8 AP000790.2-201ENST00000534388 522 ntTSL 3 BASIC8.61□□□□□ -1.03
ZC3H4Q9UPT8 AC092652.2-201ENST00000552220 622 ntTSL 4 BASIC8.61□□□□□ -1.03
ZC3H4Q9UPT8 AC007424.1-205ENST00000552615 579 ntTSL 4 BASIC8.61□□□□□ -1.03
ZC3H4Q9UPT8 IDH3A-223ENST00000561366 389 ntTSL 3 BASIC8.61□□□□□ -1.03
ZC3H4Q9UPT8 AC009101.1-201ENST00000568135 242 ntBASIC8.61□□□□□ -1.03
ZC3H4Q9UPT8 AC002094.2-201ENST00000577850 1121 ntTSL 5 BASIC8.61□□□□□ -1.03
ZC3H4Q9UPT8 STRADA-207ENST00000578008 1153 ntTSL 5 BASIC8.61□□□□□ -1.03
ZC3H4Q9UPT8 AC010980.1-204ENST00000589724 585 ntTSL 5 BASIC8.61□□□□□ -1.03
ZC3H4Q9UPT8 LINC00907-208ENST00000593051 1092 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
ZC3H4Q9UPT8 AC010605.1-201ENST00000597303 797 ntTSL 2 BASIC8.61□□□□□ -1.03
Retrieved 100 of 98,524 protein–RNA pairs in 86.5 ms