Protein–RNA interactions for Protein: Q9UI47

CTNNA3, Catenin alpha-3, humanhuman

Predictions only

Length 895 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA3Q9UI47 ST20-201ENST00000478497 1004 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
CTNNA3Q9UI47 AC246817.2-206ENST00000520570 582 ntTSL 4 BASIC6.93□□□□□ -1.3
CTNNA3Q9UI47 AC090022.1-201ENST00000546569 311 ntBASIC6.93□□□□□ -1.3
CTNNA3Q9UI47 AC090621.1-201ENST00000592121 419 ntTSL 3 BASIC6.93□□□□□ -1.3
CTNNA3Q9UI47 AL513327.3-201ENST00000602618 469 ntBASIC6.93□□□□□ -1.3
CTNNA3Q9UI47 LINC01320-205ENST00000604250 857 ntTSL 5 BASIC6.93□□□□□ -1.3
CTNNA3Q9UI47 NANOGP3-201ENST00000605855 286 ntBASIC6.93□□□□□ -1.3
CTNNA3Q9UI47 UGP2-232ENST00000640075 567 ntTSL 5 BASIC6.93□□□□□ -1.3
CTNNA3Q9UI47 AC016576.1-201ENST00000637153 3585 ntTSL 5 BASIC6.93□□□□□ -1.3
CTNNA3Q9UI47 ZNF559-201ENST00000317221 2732 ntTSL 2 BASIC6.93□□□□□ -1.3
CTNNA3Q9UI47 NBPF19-201ENST00000369227 3670 ntTSL 5 BASIC6.93□□□□□ -1.3
CTNNA3Q9UI47 NBPF20-203ENST00000594479 3670 ntTSL 5 BASIC6.93□□□□□ -1.3
CTNNA3Q9UI47 NBPF14-210ENST00000621066 3670 ntTSL 5 BASIC6.93□□□□□ -1.3
CTNNA3Q9UI47 SPATA17-201ENST00000366933 5818 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
CTNNA3Q9UI47 INPP4B-214ENST00000508116 3165 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
CTNNA3Q9UI47 ZNF493-203ENST00000392288 5023 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
CTNNA3Q9UI47 VDAC3-201ENST00000022615 1355 ntAPPRIS P3 TSL 1 (best) BASIC6.93□□□□□ -1.3
CTNNA3Q9UI47 CLIP4-202ENST00000401605 2322 ntTSL 2 BASIC6.93□□□□□ -1.3
CTNNA3Q9UI47 CCDC62-205ENST00000537566 3537 ntAPPRIS ALT2 TSL 2 BASIC6.92□□□□□ -1.3
CTNNA3Q9UI47 EPS8-207ENST00000540613 2204 ntTSL 2 BASIC6.92□□□□□ -1.3
CTNNA3Q9UI47 ZCCHC8-201ENST00000536306 2904 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
CTNNA3Q9UI47 TCF7L2-217ENST00000536810 3953 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
CTNNA3Q9UI47 GABRA1-215ENST00000636573 2262 ntAPPRIS P1 TSL 5 BASIC6.92□□□□□ -1.3
CTNNA3Q9UI47 LINC00906-206ENST00000589921 3444 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
CTNNA3Q9UI47 OR51Q1-201ENST00000300778 1096 ntAPPRIS P1 BASIC6.92□□□□□ -1.3
CTNNA3Q9UI47 RNA5SP284-201ENST00000384547 118 ntBASIC6.92□□□□□ -1.3
CTNNA3Q9UI47 AL355300.1-201ENST00000412439 187 ntTSL 3 BASIC6.92□□□□□ -1.3
CTNNA3Q9UI47 MRPL53P1-201ENST00000414323 319 ntBASIC6.92□□□□□ -1.3
CTNNA3Q9UI47 AC011754.1-201ENST00000415201 491 ntTSL 5 BASIC6.92□□□□□ -1.3
CTNNA3Q9UI47 AK4P4-201ENST00000419465 646 ntBASIC6.92□□□□□ -1.3
CTNNA3Q9UI47 SETP9-201ENST00000423837 832 ntBASIC6.92□□□□□ -1.3
CTNNA3Q9UI47 VN1R21P-201ENST00000426703 765 ntBASIC6.92□□□□□ -1.3
CTNNA3Q9UI47 AC108066.1-201ENST00000437261 596 ntTSL 4 BASIC6.92□□□□□ -1.3
CTNNA3Q9UI47 AC012368.1-201ENST00000438115 552 ntTSL 3 BASIC6.92□□□□□ -1.3
CTNNA3Q9UI47 RPS17P15-201ENST00000475609 349 ntBASIC6.92□□□□□ -1.3
CTNNA3Q9UI47 AC105384.2-201ENST00000508433 640 ntBASIC6.92□□□□□ -1.3
CTNNA3Q9UI47 AC139720.1-201ENST00000509497 512 ntTSL 3 BASIC6.92□□□□□ -1.3
CTNNA3Q9UI47 LINC02432-203ENST00000511213 719 ntTSL 2 BASIC6.92□□□□□ -1.3
CTNNA3Q9UI47 AC074255.1-201ENST00000511259 501 ntBASIC6.92□□□□□ -1.3
CTNNA3Q9UI47 PDE4D-225ENST00000515835 590 ntTSL 4 BASIC6.92□□□□□ -1.3
CTNNA3Q9UI47 AC136777.2-201ENST00000522979 358 ntBASIC6.92□□□□□ -1.3
CTNNA3Q9UI47 MITF-217ENST00000531774 1074 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
CTNNA3Q9UI47 AC134511.1-201ENST00000535721 192 ntTSL 3 BASIC6.92□□□□□ -1.3
CTNNA3Q9UI47 AC051619.2-201ENST00000559063 397 ntBASIC6.92□□□□□ -1.3
CTNNA3Q9UI47 AC136944.1-201ENST00000567464 560 ntTSL 5 BASIC6.92□□□□□ -1.3
CTNNA3Q9UI47 ZNF322P1-201ENST00000568013 1209 ntBASIC6.92□□□□□ -1.3
CTNNA3Q9UI47 VDAC1P8-204ENST00000589489 997 ntTSL 5 BASIC6.92□□□□□ -1.3
CTNNA3Q9UI47 AC079298.3-203ENST00000623269 555 ntTSL 3 BASIC6.92□□□□□ -1.3
CTNNA3Q9UI47 AC012564.1-201ENST00000636802 557 ntTSL 4 BASIC6.92□□□□□ -1.3
CTNNA3Q9UI47 ATM-229ENST00000639953 587 ntTSL 5 BASIC6.92□□□□□ -1.3
CTNNA3Q9UI47 OR51Q1-202ENST00000641085 1096 ntAPPRIS P1 BASIC6.92□□□□□ -1.3
CTNNA3Q9UI47 OR8G3P-202ENST00000641572 1255 ntBASIC6.92□□□□□ -1.3
CTNNA3Q9UI47 CAPN6-201ENST00000324068 3568 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
CTNNA3Q9UI47 TTF2-201ENST00000369466 9462 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
CTNNA3Q9UI47 LINC00615-201ENST00000546725 1406 ntTSL 2 BASIC6.92□□□□□ -1.3
CTNNA3Q9UI47 CBX5-201ENST00000209875 11528 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
CTNNA3Q9UI47 SLC17A4-202ENST00000397076 2331 ntTSL 2 BASIC6.92□□□□□ -1.3
CTNNA3Q9UI47 CRB1-203ENST00000367400 4932 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
CTNNA3Q9UI47 AC239868.2-201ENST00000564237 4527 ntBASIC6.91□□□□□ -1.3
CTNNA3Q9UI47 AL359955.1-201ENST00000455242 3275 ntBASIC6.91□□□□□ -1.3
CTNNA3Q9UI47 FILIP1L-201ENST00000331335 4219 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
CTNNA3Q9UI47 NDRG3-202ENST00000359675 2917 ntAPPRIS ALT1 TSL 1 (best) BASIC6.91□□□□□ -1.3
CTNNA3Q9UI47 MFSD8-239ENST00000641590 2479 ntBASIC6.91□□□□□ -1.3
CTNNA3Q9UI47 ZNF160-203ENST00000429604 4336 ntAPPRIS P1 TSL 3 BASIC6.91□□□□□ -1.3
CTNNA3Q9UI47 PPIAL4G-201ENST00000419275 3856 ntAPPRIS P1 BASIC6.91□□□□□ -1.3
CTNNA3Q9UI47 MFSD8-219ENST00000641228 2559 ntBASIC6.91□□□□□ -1.3
CTNNA3Q9UI47 SMARCE1-208ENST00000474246 2124 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
CTNNA3Q9UI47 TDRD5-202ENST00000367614 3632 ntAPPRIS P3 TSL 2 BASIC6.91□□□□□ -1.3
CTNNA3Q9UI47 AC098679.1-203ENST00000505532 2227 ntTSL 2 BASIC6.91□□□□□ -1.3
CTNNA3Q9UI47 MPDZ-219ENST00000546205 6342 ntAPPRIS ALT2 TSL 5 BASIC6.91□□□□□ -1.3
CTNNA3Q9UI47 MIR133A2-201ENST00000347538 102 ntBASIC6.91□□□□□ -1.3
CTNNA3Q9UI47 AMELX-201ENST00000348912 737 ntTSL 5 BASIC6.91□□□□□ -1.3
CTNNA3Q9UI47 OR6K2-201ENST00000359610 975 ntAPPRIS P1 BASIC6.91□□□□□ -1.3
CTNNA3Q9UI47 DNAJA1P3-201ENST00000399417 1194 ntBASIC6.91□□□□□ -1.3
CTNNA3Q9UI47 OR7E101P-201ENST00000400428 513 ntBASIC6.91□□□□□ -1.3
CTNNA3Q9UI47 LYPLA1P3-201ENST00000402650 695 ntBASIC6.91□□□□□ -1.3
CTNNA3Q9UI47 AP001610.2-201ENST00000415820 422 ntTSL 3 BASIC6.91□□□□□ -1.3
CTNNA3Q9UI47 MIRLET7DHG-201ENST00000416309 1294 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
CTNNA3Q9UI47 BX323845.3-201ENST00000428215 527 ntBASIC6.91□□□□□ -1.3
CTNNA3Q9UI47 CDY8P-201ENST00000428380 1279 ntBASIC6.91□□□□□ -1.3
CTNNA3Q9UI47 AL590399.4-201ENST00000436561 601 ntBASIC6.91□□□□□ -1.3
CTNNA3Q9UI47 CDY20P-201ENST00000447528 1279 ntBASIC6.91□□□□□ -1.3
CTNNA3Q9UI47 OR2A1-AS1-202ENST00000467944 422 ntBASIC6.91□□□□□ -1.3
CTNNA3Q9UI47 PDCL3P4-201ENST00000489621 720 ntBASIC6.91□□□□□ -1.3
CTNNA3Q9UI47 LINC00518-204ENST00000491317 1228 ntTSL 2 BASIC6.91□□□□□ -1.3
CTNNA3Q9UI47 PSMA2P2-201ENST00000504319 686 ntBASIC6.91□□□□□ -1.3
CTNNA3Q9UI47 SSX6-203ENST00000509958 336 ntTSL 3 BASIC6.91□□□□□ -1.3
CTNNA3Q9UI47 AC114781.3-201ENST00000512083 142 ntBASIC6.91□□□□□ -1.3
CTNNA3Q9UI47 AC097486.1-201ENST00000515331 210 ntBASIC6.91□□□□□ -1.3
CTNNA3Q9UI47 SNORD46.2-201ENST00000516021 102 ntBASIC6.91□□□□□ -1.3
CTNNA3Q9UI47 LDHC-203ENST00000535809 757 ntTSL 5 BASIC6.91□□□□□ -1.3
CTNNA3Q9UI47 OR52E8-201ENST00000537935 1061 ntAPPRIS P1 BASIC6.91□□□□□ -1.3
CTNNA3Q9UI47 AC007569.1-202ENST00000547282 303 ntTSL 3 BASIC6.91□□□□□ -1.3
CTNNA3Q9UI47 C15orf41-204ENST00000562877 764 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
CTNNA3Q9UI47 AC092121.1-201ENST00000569452 202 ntBASIC6.91□□□□□ -1.3
CTNNA3Q9UI47 AL354733.2-210ENST00000586211 647 ntTSL 5 BASIC6.91□□□□□ -1.3
CTNNA3Q9UI47 AC020909.2-201ENST00000595005 626 ntTSL 2 BASIC6.91□□□□□ -1.3
CTNNA3Q9UI47 CCL4-202ENST00000615863 904 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
CTNNA3Q9UI47 NADK2-211ENST00000617628 744 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
CTNNA3Q9UI47 AL132656.2-201ENST00000482985 1837 ntTSL 5 BASIC6.91□□□□□ -1.3
Retrieved 100 of 98,524 protein–RNA pairs in 76.3 ms