Protein–RNA interactions for Protein: Q9P219

CCDC88C, Protein Daple, humanhuman

Predictions only

Length 2,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC88CQ9P219 MTRNR2L3-201ENST00000543500 1539 ntAPPRIS P1 BASIC5.44□□□□□ -1.54
CCDC88CQ9P219 MDM4-217ENST00000621032 5592 ntTSL 2 BASIC5.44□□□□□ -1.54
CCDC88CQ9P219 RABGAP1L-218ENST00000489615 6821 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
CCDC88CQ9P219 ZNF644-204ENST00000370440 5702 ntAPPRIS P1 TSL 5 BASIC5.44□□□□□ -1.54
CCDC88CQ9P219 AC123769.1-201ENST00000530992 3192 ntBASIC5.44□□□□□ -1.54
CCDC88CQ9P219 PYROXD1-205ENST00000538582 3639 ntTSL 2 BASIC5.44□□□□□ -1.54
CCDC88CQ9P219 AC010168.2-201ENST00000562691 5428 ntBASIC5.44□□□□□ -1.54
CCDC88CQ9P219 KYNUP3-201ENST00000574386 1341 ntBASIC5.44□□□□□ -1.54
CCDC88CQ9P219 ASXL3-201ENST00000269197 11399 ntAPPRIS P2 TSL 5 BASIC5.44□□□□□ -1.54
CCDC88CQ9P219 RNA5SP326-201ENST00000363209 110 ntBASIC5.44□□□□□ -1.54
CCDC88CQ9P219 RN7SKP151-201ENST00000410230 316 ntBASIC5.44□□□□□ -1.54
CCDC88CQ9P219 OR2AT2P-201ENST00000413438 905 ntBASIC5.44□□□□□ -1.54
CCDC88CQ9P219 AP000221.1-201ENST00000419694 1046 ntTSL 3 BASIC5.44□□□□□ -1.54
CCDC88CQ9P219 AC079355.1-201ENST00000421770 223 ntBASIC5.44□□□□□ -1.54
CCDC88CQ9P219 BX276092.6-201ENST00000430476 250 ntBASIC5.44□□□□□ -1.54
CCDC88CQ9P219 AC012075.1-201ENST00000436549 580 ntBASIC5.44□□□□□ -1.54
CCDC88CQ9P219 AC017074.2-201ENST00000439382 607 ntTSL 2 BASIC5.44□□□□□ -1.54
CCDC88CQ9P219 AL353804.1-201ENST00000444482 451 ntTSL 5 BASIC5.44□□□□□ -1.54
CCDC88CQ9P219 BBIP1-207ENST00000448814 2119 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
CCDC88CQ9P219 AL157371.1-201ENST00000451910 394 ntTSL 3 BASIC5.44□□□□□ -1.54
CCDC88CQ9P219 BX276092.8-201ENST00000455722 250 ntBASIC5.44□□□□□ -1.54
CCDC88CQ9P219 AC068672.3-203ENST00000505166 311 ntTSL 3 BASIC5.44□□□□□ -1.54
CCDC88CQ9P219 LINC01365-202ENST00000512219 637 ntTSL 5 BASIC5.44□□□□□ -1.54
CCDC88CQ9P219 GPRC5D-AS1-208ENST00000545914 566 ntTSL 3 BASIC5.44□□□□□ -1.54
CCDC88CQ9P219 RNU4ATAC-201ENST00000580972 127 ntBASIC5.44□□□□□ -1.54
CCDC88CQ9P219 MIR6729-201ENST00000618194 65 ntBASIC5.44□□□□□ -1.54
CCDC88CQ9P219 AL445670.1-201ENST00000618889 801 ntBASIC5.44□□□□□ -1.54
CCDC88CQ9P219 OR52B4-201ENST00000624801 1124 ntAPPRIS P1 BASIC5.44□□□□□ -1.54
CCDC88CQ9P219 LINC00850-201ENST00000629221 685 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
CCDC88CQ9P219 ZNF253-205ENST00000640599 1208 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
CCDC88CQ9P219 OR2J1-202ENST00000641659 2144 ntAPPRIS P1 BASIC5.44□□□□□ -1.54
CCDC88CQ9P219 IPCEF1-202ENST00000367220 1658 ntAPPRIS ALT2 TSL 2 BASIC5.44□□□□□ -1.54
CCDC88CQ9P219 RYR3-212ENST00000634891 15591 ntAPPRIS P3 TSL 1 (best) BASIC5.44□□□□□ -1.54
CCDC88CQ9P219 AL160286.3-201ENST00000569644 3294 ntTSL 2 BASIC5.44□□□□□ -1.54
CCDC88CQ9P219 AL031595.2-201ENST00000624215 19071 ntBASIC5.44□□□□□ -1.54
CCDC88CQ9P219 OR51G2-202ENST00000641926 3326 ntAPPRIS P1 BASIC5.44□□□□□ -1.54
CCDC88CQ9P219 MSL3P1-202ENST00000440028 1468 ntBASIC5.44□□□□□ -1.54
CCDC88CQ9P219 ZNF248-201ENST00000357328 4795 ntAPPRIS P1 TSL 2 BASIC5.44□□□□□ -1.54
CCDC88CQ9P219 AC078880.4-201ENST00000617627 1749 ntBASIC5.44□□□□□ -1.54
CCDC88CQ9P219 NSD3-206ENST00000527502 4471 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
CCDC88CQ9P219 ZNF215-205ENST00000529903 1396 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
CCDC88CQ9P219 CPEB4-202ENST00000334035 6705 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
CCDC88CQ9P219 EMC2-201ENST00000220853 1243 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
CCDC88CQ9P219 AGBL4-201ENST00000334103 881 ntTSL 5 BASIC5.43□□□□□ -1.54
CCDC88CQ9P219 AC106870.1-201ENST00000359823 200 ntTSL 3 BASIC5.43□□□□□ -1.54
CCDC88CQ9P219 AL353693.1-201ENST00000429567 442 ntTSL 3 BASIC5.43□□□□□ -1.54
CCDC88CQ9P219 AL442224.1-201ENST00000443771 391 ntTSL 2 BASIC5.43□□□□□ -1.54
CCDC88CQ9P219 AL022329.1-203ENST00000453811 451 ntTSL 3 BASIC5.43□□□□□ -1.54
CCDC88CQ9P219 RN7SL352P-201ENST00000466002 277 ntBASIC5.43□□□□□ -1.54
CCDC88CQ9P219 ATG10-208ENST00000513634 618 ntTSL 2 BASIC5.43□□□□□ -1.54
CCDC88CQ9P219 AC139697.1-201ENST00000548429 745 ntBASIC5.43□□□□□ -1.54
CCDC88CQ9P219 C15orf41-204ENST00000562877 764 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
CCDC88CQ9P219 LINC02129-201ENST00000564381 692 ntTSL 5 BASIC5.43□□□□□ -1.54
CCDC88CQ9P219 ADAMTS9-AS1-210ENST00000625328 699 ntTSL 5 BASIC5.43□□□□□ -1.54
CCDC88CQ9P219 MIR325HG-202ENST00000626832 598 ntTSL 4 BASIC5.43□□□□□ -1.54
CCDC88CQ9P219 PUM2-201ENST00000319801 6002 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
CCDC88CQ9P219 KYAT3-203ENST00000370491 1868 ntAPPRIS ALT1 TSL 2 BASIC5.43□□□□□ -1.54
CCDC88CQ9P219 ZNF813-201ENST00000396403 6151 ntAPPRIS P1 TSL 3 BASIC5.43□□□□□ -1.54
CCDC88CQ9P219 VPS35-201ENST00000299138 6790 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
CCDC88CQ9P219 LIMA1-215ENST00000552823 3254 ntAPPRIS ALT2 TSL 2 BASIC5.43□□□□□ -1.54
CCDC88CQ9P219 ZFP42-201ENST00000326866 2651 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
CCDC88CQ9P219 CTAGE5-204ENST00000341749 2912 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
CCDC88CQ9P219 PPP2R5E-202ENST00000422769 3478 ntTSL 2 BASIC5.43□□□□□ -1.54
CCDC88CQ9P219 CEP85L-201ENST00000360290 1736 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
CCDC88CQ9P219 POC1B-201ENST00000313546 3001 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
CCDC88CQ9P219 LINC01951-201ENST00000377300 1925 ntTSL 2 BASIC5.43□□□□□ -1.54
CCDC88CQ9P219 YPEL5-202ENST00000379519 2499 ntAPPRIS P1 TSL 2 BASIC5.43□□□□□ -1.54
CCDC88CQ9P219 CASC19-248ENST00000641674 1356 ntBASIC5.43□□□□□ -1.54
CCDC88CQ9P219 EIF2AK2-201ENST00000233057 10042 ntAPPRIS P1 TSL 2 BASIC5.43□□□□□ -1.54
CCDC88CQ9P219 THOC2-220ENST00000618150 3211 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
CCDC88CQ9P219 AC117409.1-201ENST00000470499 1310 ntBASIC5.43□□□□□ -1.54
CCDC88CQ9P219 URI1-201ENST00000360605 1579 ntAPPRIS ALT2 TSL 1 (best) BASIC5.43□□□□□ -1.54
CCDC88CQ9P219 LINC02421-201ENST00000542219 3135 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
CCDC88CQ9P219 U3.7-201ENST00000363668 216 ntBASIC5.43□□□□□ -1.54
CCDC88CQ9P219 MIR130A-201ENST00000385274 89 ntBASIC5.43□□□□□ -1.54
CCDC88CQ9P219 RN7SKP278-201ENST00000410504 342 ntBASIC5.43□□□□□ -1.54
CCDC88CQ9P219 HNRNPDLP2-201ENST00000455248 751 ntBASIC5.43□□□□□ -1.54
CCDC88CQ9P219 AC006499.3-201ENST00000506077 748 ntBASIC5.43□□□□□ -1.54
CCDC88CQ9P219 AC126768.1-201ENST00000511698 490 ntTSL 3 BASIC5.43□□□□□ -1.54
CCDC88CQ9P219 AC139365.2-201ENST00000517972 253 ntBASIC5.43□□□□□ -1.54
CCDC88CQ9P219 AC008575.1-201ENST00000520401 694 ntAPPRIS P1 TSL 3 BASIC5.43□□□□□ -1.54
CCDC88CQ9P219 ATPAF1-210ENST00000532925 998 ntTSL 2 BASIC5.43□□□□□ -1.54
CCDC88CQ9P219 AP002754.2-201ENST00000542121 462 ntTSL 5 BASIC5.43□□□□□ -1.54
CCDC88CQ9P219 ABCB11-201ENST00000263817 4775 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
CCDC88CQ9P219 LINC01684-203ENST00000453784 2908 ntTSL 2 BASIC5.43□□□□□ -1.54
CCDC88CQ9P219 N4BP2L2-201ENST00000267068 9427 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
CCDC88CQ9P219 ERVH48-1-201ENST00000447535 2790 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
CCDC88CQ9P219 CTNND1-212ENST00000525902 4984 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
CCDC88CQ9P219 CTNND1-214ENST00000526772 4966 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
CCDC88CQ9P219 RNASEL-202ENST00000539397 4046 ntTSL 2 BASIC5.42□□□□□ -1.54
CCDC88CQ9P219 EPB41L2-220ENST00000528282 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC5.42□□□□□ -1.54
CCDC88CQ9P219 CCPG1-202ENST00000425574 1945 ntTSL 2 BASIC5.42□□□□□ -1.54
CCDC88CQ9P219 LINC01958-201ENST00000637749 1941 ntTSL 5 BASIC5.42□□□□□ -1.54
CCDC88CQ9P219 ECT2L-205ENST00000541398 4483 ntAPPRIS P1 TSL 5 BASIC5.42□□□□□ -1.54
CCDC88CQ9P219 C9orf153-202ENST00000376001 409 ntAPPRIS ALT2 TSL 3 BASIC5.42□□□□□ -1.54
CCDC88CQ9P219 COMMD6-204ENST00000377619 594 ntTSL 2 BASIC5.42□□□□□ -1.54
CCDC88CQ9P219 MIR105-2-201ENST00000385083 81 ntBASIC5.42□□□□□ -1.54
CCDC88CQ9P219 SNX24-202ENST00000395451 1050 ntTSL 3 BASIC5.42□□□□□ -1.54
CCDC88CQ9P219 AL133173.1-201ENST00000423458 397 ntBASIC5.42□□□□□ -1.54
CCDC88CQ9P219 AL359853.3-201ENST00000423879 544 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 99.2 ms