Protein–RNA interactions for Protein: Q9NPC8

SIX2, Homeobox protein SIX2, humanhuman

Predictions only

Length 291 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX2Q9NPC8 RNU6-615P-201ENST00000516065 106 ntBASIC6□□□□□ -1.45
SIX2Q9NPC8 UQCRB-204ENST00000518406 595 ntTSL 5 BASIC6□□□□□ -1.45
SIX2Q9NPC8 AC079064.1-201ENST00000528365 362 ntBASIC6□□□□□ -1.45
SIX2Q9NPC8 AC069234.2-201ENST00000541383 575 ntTSL 3 BASIC6□□□□□ -1.45
SIX2Q9NPC8 AL132800.1-201ENST00000555109 698 ntTSL 5 BASIC6□□□□□ -1.45
SIX2Q9NPC8 NPM1P5-201ENST00000557228 838 ntBASIC6□□□□□ -1.45
SIX2Q9NPC8 AC087190.2-201ENST00000565648 731 ntTSL 3 BASIC6□□□□□ -1.45
SIX2Q9NPC8 THCAT158-201ENST00000575039 535 ntTSL 5 BASIC6□□□□□ -1.45
SIX2Q9NPC8 AC012588.1-201ENST00000583852 358 ntTSL 3 BASIC6□□□□□ -1.45
SIX2Q9NPC8 AC024563.1-201ENST00000601860 618 ntTSL 2 BASIC6□□□□□ -1.45
SIX2Q9NPC8 AL138895.2-201ENST00000603019 178 ntBASIC6□□□□□ -1.45
SIX2Q9NPC8 AL049840.6-201ENST00000604583 345 ntBASIC6□□□□□ -1.45
SIX2Q9NPC8 AC010632.3-201ENST00000611377 369 ntBASIC6□□□□□ -1.45
SIX2Q9NPC8 CXADRP3-202ENST00000617265 1100 ntBASIC6□□□□□ -1.45
SIX2Q9NPC8 AC013268.3-201ENST00000262716 2324 ntBASIC6□□□□□ -1.45
SIX2Q9NPC8 CDH13-209ENST00000567109 8042 ntAPPRIS ALT2 TSL 1 (best) BASIC6□□□□□ -1.45
SIX2Q9NPC8 HECW2-201ENST00000260983 11809 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
SIX2Q9NPC8 OR13C1P-202ENST00000641378 2919 ntBASIC6□□□□□ -1.45
SIX2Q9NPC8 DPCR1-202ENST00000462446 5314 ntAPPRIS P2 TSL 5 BASIC6□□□□□ -1.45
SIX2Q9NPC8 TMEM161B-211ENST00000512429 1796 ntTSL 2 BASIC6□□□□□ -1.45
SIX2Q9NPC8 MAPRE2-202ENST00000413393 4173 ntAPPRIS ALT1 TSL 5 BASIC6□□□□□ -1.45
SIX2Q9NPC8 MARCH7-201ENST00000259050 5922 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
SIX2Q9NPC8 LRRN3-204ENST00000451085 3725 ntAPPRIS P1 TSL 2 BASIC6□□□□□ -1.45
SIX2Q9NPC8 FABP2-201ENST00000274024 2478 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
SIX2Q9NPC8 DNHD1-201ENST00000254579 14862 ntAPPRIS P1 TSL 5 BASIC5.99□□□□□ -1.45
SIX2Q9NPC8 NAP1L1-227ENST00000618691 13505 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
SIX2Q9NPC8 TNFSF11-202ENST00000358545 1520 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
SIX2Q9NPC8 AC068775.1-202ENST00000538173 1602 ntAPPRIS P1 BASIC5.99□□□□□ -1.45
SIX2Q9NPC8 DCC-202ENST00000412726 9525 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
SIX2Q9NPC8 ZNF493-202ENST00000355504 4386 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
SIX2Q9NPC8 SLC4A10-204ENST00000421911 3398 ntTSL 5 BASIC5.99□□□□□ -1.45
SIX2Q9NPC8 FHL1-218ENST00000543669 2878 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
SIX2Q9NPC8 BTBD10-210ENST00000530907 1871 ntAPPRIS ALT1 TSL 2 BASIC5.99□□□□□ -1.45
SIX2Q9NPC8 ALB-202ENST00000401494 1659 ntTSL 5 BASIC5.99□□□□□ -1.45
SIX2Q9NPC8 UGT2A2-202ENST00000604629 1676 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
SIX2Q9NPC8 AC245100.4-204ENST00000635587 1555 ntTSL 5 BASIC5.99□□□□□ -1.45
SIX2Q9NPC8 AC079097.1-201ENST00000512187 1399 ntBASIC5.99□□□□□ -1.45
SIX2Q9NPC8 ZNF215-205ENST00000529903 1396 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
SIX2Q9NPC8 SSX5-202ENST00000347757 1261 ntAPPRIS ALT2 TSL 5 BASIC5.99□□□□□ -1.45
SIX2Q9NPC8 SSX5-203ENST00000376923 1208 ntAPPRIS ALT2 TSL 5 BASIC5.99□□□□□ -1.45
SIX2Q9NPC8 DEFB135-201ENST00000382208 234 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
SIX2Q9NPC8 SNORA70.6-201ENST00000383934 134 ntBASIC5.99□□□□□ -1.45
SIX2Q9NPC8 IGLV3-10-201ENST00000390315 382 ntAPPRIS P1 BASIC5.99□□□□□ -1.45
SIX2Q9NPC8 AC093155.2-201ENST00000420734 937 ntBASIC5.99□□□□□ -1.45
SIX2Q9NPC8 AL354766.1-201ENST00000423396 542 ntBASIC5.99□□□□□ -1.45
SIX2Q9NPC8 AL662874.1-201ENST00000426065 230 ntBASIC5.99□□□□□ -1.45
SIX2Q9NPC8 AL021153.1-201ENST00000427360 308 ntTSL 3 BASIC5.99□□□□□ -1.45
SIX2Q9NPC8 RPS27AP6-201ENST00000427962 448 ntBASIC5.99□□□□□ -1.45
SIX2Q9NPC8 RPL7P56-201ENST00000429441 717 ntBASIC5.99□□□□□ -1.45
SIX2Q9NPC8 FGF12-202ENST00000430714 603 ntTSL 2 BASIC5.99□□□□□ -1.45
SIX2Q9NPC8 LDHAP2-201ENST00000437325 985 ntBASIC5.99□□□□□ -1.45
SIX2Q9NPC8 SUMO2P3-201ENST00000438311 288 ntBASIC5.99□□□□□ -1.45
SIX2Q9NPC8 AL359265.1-201ENST00000440296 795 ntBASIC5.99□□□□□ -1.45
SIX2Q9NPC8 AC073465.2-201ENST00000440938 498 ntBASIC5.99□□□□□ -1.45
SIX2Q9NPC8 AC004692.2-203ENST00000458590 497 ntTSL 4 BASIC5.99□□□□□ -1.45
SIX2Q9NPC8 AC087672.1-201ENST00000479876 766 ntBASIC5.99□□□□□ -1.45
SIX2Q9NPC8 RN7SL649P-201ENST00000496974 275 ntBASIC5.99□□□□□ -1.45
SIX2Q9NPC8 AC008517.1-201ENST00000502383 585 ntTSL 4 BASIC5.99□□□□□ -1.45
SIX2Q9NPC8 AC097486.1-201ENST00000515331 210 ntBASIC5.99□□□□□ -1.45
SIX2Q9NPC8 AC010226.1-203ENST00000515570 765 ntTSL 2 BASIC5.99□□□□□ -1.45
SIX2Q9NPC8 AP000722.1-201ENST00000531176 775 ntTSL 3 BASIC5.99□□□□□ -1.45
SIX2Q9NPC8 LINC02319-201ENST00000555852 349 ntTSL 3 BASIC5.99□□□□□ -1.45
SIX2Q9NPC8 LINC01955-201ENST00000626392 792 ntTSL 5 BASIC5.99□□□□□ -1.45
SIX2Q9NPC8 IPO5-229ENST00000631030 192 ntTSL 5 BASIC5.99□□□□□ -1.45
SIX2Q9NPC8 PIGK-202ENST00000370812 4596 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
SIX2Q9NPC8 ZNF271P-205ENST00000639248 4573 ntTSL 5 BASIC5.99□□□□□ -1.45
SIX2Q9NPC8 XPNPEP3-201ENST00000357137 7988 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
SIX2Q9NPC8 RFTN2-201ENST00000295049 5827 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
SIX2Q9NPC8 SAMD9L-202ENST00000411955 5831 ntAPPRIS P1 TSL 5 BASIC5.99□□□□□ -1.45
SIX2Q9NPC8 TBCK-205ENST00000432496 3362 ntAPPRIS P1 TSL 2 BASIC5.99□□□□□ -1.45
SIX2Q9NPC8 NDUFS1-207ENST00000455934 3361 ntTSL 2 BASIC5.99□□□□□ -1.45
SIX2Q9NPC8 AC239868.2-201ENST00000564237 4527 ntBASIC5.99□□□□□ -1.45
SIX2Q9NPC8 RYR3-202ENST00000415757 15557 ntAPPRIS ALT2 TSL 2 BASIC5.99□□□□□ -1.45
SIX2Q9NPC8 APOL6-201ENST00000409652 10121 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
SIX2Q9NPC8 PLCB4-201ENST00000278655 5430 ntAPPRIS ALT1 TSL 1 (best) BASIC5.99□□□□□ -1.45
SIX2Q9NPC8 AC106872.5-201ENST00000508856 1416 ntBASIC5.99□□□□□ -1.45
SIX2Q9NPC8 ZNF402P-201ENST00000404435 3100 ntBASIC5.99□□□□□ -1.45
SIX2Q9NPC8 LINC01963-201ENST00000562038 3148 ntBASIC5.99□□□□□ -1.45
SIX2Q9NPC8 SLC26A7-208ENST00000523719 2902 ntAPPRIS P1 TSL 2 BASIC5.98□□□□□ -1.45
SIX2Q9NPC8 RAPH1-207ENST00000423104 1860 ntAPPRIS ALT2 TSL 5 BASIC5.98□□□□□ -1.45
SIX2Q9NPC8 DPP8-210ENST00000559233 2953 ntAPPRIS P4 TSL 2 BASIC5.98□□□□□ -1.45
SIX2Q9NPC8 SLCO1C1-209ENST00000545604 2557 ntTSL 2 BASIC5.98□□□□□ -1.45
SIX2Q9NPC8 ADGB-205ENST00000397944 5325 ntAPPRIS P5 TSL 5 BASIC5.98□□□□□ -1.45
SIX2Q9NPC8 MARK2P4-201ENST00000503381 2380 ntBASIC5.98□□□□□ -1.45
SIX2Q9NPC8 AC100757.1-201ENST00000616872 1835 ntBASIC5.98□□□□□ -1.45
SIX2Q9NPC8 OR11H6-201ENST00000315519 993 ntAPPRIS P1 BASIC5.98□□□□□ -1.45
SIX2Q9NPC8 SPRR2D-201ENST00000360379 682 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
SIX2Q9NPC8 LEMD1-203ENST00000367152 741 ntTSL 2 BASIC5.98□□□□□ -1.45
SIX2Q9NPC8 RPL7P58-201ENST00000402913 758 ntBASIC5.98□□□□□ -1.45
SIX2Q9NPC8 VN1R12P-201ENST00000403778 876 ntBASIC5.98□□□□□ -1.45
SIX2Q9NPC8 NME1P1-201ENST00000420914 382 ntBASIC5.98□□□□□ -1.45
SIX2Q9NPC8 RPL24P2-201ENST00000421023 475 ntBASIC5.98□□□□□ -1.45
SIX2Q9NPC8 RPL5P2-201ENST00000429598 854 ntBASIC5.98□□□□□ -1.45
SIX2Q9NPC8 VDAC2P4-201ENST00000452925 711 ntBASIC5.98□□□□□ -1.45
SIX2Q9NPC8 AC099344.3-201ENST00000454489 626 ntTSL 3 BASIC5.98□□□□□ -1.45
SIX2Q9NPC8 PTPN20-212ENST00000502254 599 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
SIX2Q9NPC8 AC018680.1-201ENST00000513332 875 ntTSL 3 BASIC5.98□□□□□ -1.45
SIX2Q9NPC8 MYL6-213ENST00000549017 502 ntTSL 3 BASIC5.98□□□□□ -1.45
SIX2Q9NPC8 AL163195.3-202ENST00000555283 578 ntAPPRIS P1 TSL 4 BASIC5.98□□□□□ -1.45
SIX2Q9NPC8 ETFRF1-211ENST00000557540 1259 ntAPPRIS ALT1 TSL 2 BASIC5.98□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 69.2 ms