Protein–RNA interactions for Protein: Q9HC56

PCDH9, Protocadherin-9, humanhuman

Predictions only

Length 1,237 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9Q9HC56 CCR5-201ENST00000292303 3450 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
PCDH9Q9HC56 ACSL5-202ENST00000354655 3351 ntAPPRIS P1 TSL 2 BASIC5.99□□□□□ -1.45
PCDH9Q9HC56 ZNF615-201ENST00000376716 4048 ntAPPRIS P3 TSL 2 BASIC5.99□□□□□ -1.45
PCDH9Q9HC56 AC011933.2-201ENST00000578539 2790 ntBASIC5.99□□□□□ -1.45
PCDH9Q9HC56 OR8D4-201ENST00000321355 1331 ntAPPRIS P1 BASIC5.99□□□□□ -1.45
PCDH9Q9HC56 VWC2L-201ENST00000312504 4610 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
PCDH9Q9HC56 ZNF227-208ENST00000589005 2943 ntTSL 2 BASIC5.98□□□□□ -1.45
PCDH9Q9HC56 AQP9-202ENST00000536493 2803 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
PCDH9Q9HC56 ARHGAP20-206ENST00000533353 6066 ntAPPRIS ALT2 TSL 1 (best) BASIC5.98□□□□□ -1.45
PCDH9Q9HC56 VRK2-206ENST00000435505 2446 ntAPPRIS P3 TSL 1 (best) BASIC5.98□□□□□ -1.45
PCDH9Q9HC56 RBM41-201ENST00000372479 1662 ntAPPRIS P3 TSL 1 (best) BASIC5.98□□□□□ -1.45
PCDH9Q9HC56 ZNF493-203ENST00000392288 5023 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
PCDH9Q9HC56 AC011503.1-201ENST00000596326 1585 ntTSL 2 BASIC5.98□□□□□ -1.45
PCDH9Q9HC56 MEMO1-202ENST00000379383 1498 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
PCDH9Q9HC56 OR5M3-201ENST00000312240 1051 ntAPPRIS P1 BASIC5.98□□□□□ -1.45
PCDH9Q9HC56 RN7SKP275-201ENST00000364626 301 ntBASIC5.98□□□□□ -1.45
PCDH9Q9HC56 RNU1-136P-201ENST00000384181 164 ntBASIC5.98□□□□□ -1.45
PCDH9Q9HC56 ATP5A1P8-201ENST00000423669 1291 ntBASIC5.98□□□□□ -1.45
PCDH9Q9HC56 AC115283.1-201ENST00000427353 400 ntBASIC5.98□□□□□ -1.45
PCDH9Q9HC56 AL024474.2-201ENST00000431309 501 ntTSL 3 BASIC5.98□□□□□ -1.45
PCDH9Q9HC56 TEX41-206ENST00000432608 661 ntTSL 3 BASIC5.98□□□□□ -1.45
PCDH9Q9HC56 RPS23P9-201ENST00000448848 438 ntBASIC5.98□□□□□ -1.45
PCDH9Q9HC56 AC246785.3-201ENST00000455105 314 ntTSL 5 BASIC5.98□□□□□ -1.45
PCDH9Q9HC56 AC089999.1-201ENST00000460336 374 ntBASIC5.98□□□□□ -1.45
PCDH9Q9HC56 RWDD4P1-201ENST00000488019 565 ntBASIC5.98□□□□□ -1.45
PCDH9Q9HC56 RN7SL193P-201ENST00000491708 276 ntBASIC5.98□□□□□ -1.45
PCDH9Q9HC56 AC097486.1-201ENST00000515331 210 ntBASIC5.98□□□□□ -1.45
PCDH9Q9HC56 WASHC5-AS1-201ENST00000519140 587 ntTSL 4 BASIC5.98□□□□□ -1.45
PCDH9Q9HC56 AC010768.4-201ENST00000528183 520 ntTSL 3 BASIC5.98□□□□□ -1.45
PCDH9Q9HC56 PCED1B-AS1-203ENST00000547626 420 ntTSL 2 BASIC5.98□□□□□ -1.45
PCDH9Q9HC56 LINC02319-201ENST00000555852 349 ntTSL 3 BASIC5.98□□□□□ -1.45
PCDH9Q9HC56 ZNF971P-202ENST00000568619 461 ntTSL 3 BASIC5.98□□□□□ -1.45
PCDH9Q9HC56 MIR4776-2-201ENST00000580204 80 ntBASIC5.98□□□□□ -1.45
PCDH9Q9HC56 AC090415.2-201ENST00000584078 374 ntTSL 3 BASIC5.98□□□□□ -1.45
PCDH9Q9HC56 AC087468.1-201ENST00000604365 630 ntBASIC5.98□□□□□ -1.45
PCDH9Q9HC56 BNIP3P7-201ENST00000605641 516 ntBASIC5.98□□□□□ -1.45
PCDH9Q9HC56 LINC02343-201ENST00000605909 573 ntTSL 4 BASIC5.98□□□□□ -1.45
PCDH9Q9HC56 AL109620.1-201ENST00000618738 1197 ntBASIC5.98□□□□□ -1.45
PCDH9Q9HC56 AP003400.2-201ENST00000624036 666 ntBASIC5.98□□□□□ -1.45
PCDH9Q9HC56 GVQW2-203ENST00000641401 327 ntAPPRIS P1 BASIC5.98□□□□□ -1.45
PCDH9Q9HC56 C12orf50-201ENST00000298699 1722 ntAPPRIS P1 TSL 2 BASIC5.98□□□□□ -1.45
PCDH9Q9HC56 ZNF480-204ENST00000490272 2238 ntTSL 2 BASIC5.98□□□□□ -1.45
PCDH9Q9HC56 ZCCHC8-201ENST00000536306 2904 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
PCDH9Q9HC56 EEF1A1P21-201ENST00000512363 1344 ntBASIC5.98□□□□□ -1.45
PCDH9Q9HC56 CASC19-260ENST00000641828 2001 ntBASIC5.98□□□□□ -1.45
PCDH9Q9HC56 GLIPR1L2-202ENST00000378692 1903 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
PCDH9Q9HC56 LINC00309-201ENST00000431020 3307 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
PCDH9Q9HC56 AP004607.3-201ENST00000530354 3915 ntBASIC5.97□□□□□ -1.45
PCDH9Q9HC56 CC2D2B-201ENST00000344386 1809 ntAPPRIS P3 TSL 1 (best) BASIC5.97□□□□□ -1.45
PCDH9Q9HC56 FLG2-201ENST00000388718 9124 ntAPPRIS P1 TSL 5 BASIC5.97□□□□□ -1.45
PCDH9Q9HC56 FCRL5-202ENST00000368189 4424 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
PCDH9Q9HC56 GLYATL1-201ENST00000300079 2068 ntAPPRIS P3 TSL 2 BASIC5.97□□□□□ -1.45
PCDH9Q9HC56 ZNF23-207ENST00000564528 3020 ntAPPRIS ALT2 TSL 2 BASIC5.97□□□□□ -1.45
PCDH9Q9HC56 MRC1-201ENST00000569591 5198 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
PCDH9Q9HC56 SAMM50P1-201ENST00000455403 1399 ntBASIC5.97□□□□□ -1.45
PCDH9Q9HC56 ZNF311-203ENST00000377179 2730 ntAPPRIS P1 TSL 5 BASIC5.97□□□□□ -1.45
PCDH9Q9HC56 KLRF1-201ENST00000279545 1091 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
PCDH9Q9HC56 OR7E25P-201ENST00000344844 931 ntBASIC5.97□□□□□ -1.45
PCDH9Q9HC56 FAS-203ENST00000355279 983 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
PCDH9Q9HC56 AC016739.1-201ENST00000405359 345 ntBASIC5.97□□□□□ -1.45
PCDH9Q9HC56 AL354890.1-201ENST00000413730 346 ntBASIC5.97□□□□□ -1.45
PCDH9Q9HC56 RANP7-201ENST00000418085 644 ntBASIC5.97□□□□□ -1.45
PCDH9Q9HC56 LINC00701-201ENST00000418295 742 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
PCDH9Q9HC56 LINC00626-201ENST00000420691 955 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
PCDH9Q9HC56 AL391704.3-201ENST00000425365 831 ntTSL 3 BASIC5.97□□□□□ -1.45
PCDH9Q9HC56 XKRYP6-201ENST00000440468 1116 ntBASIC5.97□□□□□ -1.45
PCDH9Q9HC56 USP12-AS1-201ENST00000440657 268 ntTSL 5 BASIC5.97□□□□□ -1.45
PCDH9Q9HC56 XKRYP3-201ENST00000442113 1116 ntBASIC5.97□□□□□ -1.45
PCDH9Q9HC56 AC023141.8-201ENST00000442554 208 ntBASIC5.97□□□□□ -1.45
PCDH9Q9HC56 AL021940.1-201ENST00000454271 677 ntTSL 2 BASIC5.97□□□□□ -1.45
PCDH9Q9HC56 AC105021.1-201ENST00000455347 590 ntTSL 3 BASIC5.97□□□□□ -1.45
PCDH9Q9HC56 PHC3-208ENST00000481639 1075 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
PCDH9Q9HC56 AGGF1P3-201ENST00000493675 1213 ntBASIC5.97□□□□□ -1.45
PCDH9Q9HC56 AC027343.2-201ENST00000513219 343 ntTSL 3 BASIC5.97□□□□□ -1.45
PCDH9Q9HC56 OR5H7P-201ENST00000514084 930 ntBASIC5.97□□□□□ -1.45
PCDH9Q9HC56 AC111000.6-201ENST00000514471 709 ntBASIC5.97□□□□□ -1.45
PCDH9Q9HC56 AC096577.1-202ENST00000515649 448 ntTSL 3 BASIC5.97□□□□□ -1.45
PCDH9Q9HC56 CETN3-206ENST00000522864 738 ntTSL 3 BASIC5.97□□□□□ -1.45
PCDH9Q9HC56 AC005363.1-201ENST00000530779 351 ntBASIC5.97□□□□□ -1.45
PCDH9Q9HC56 VPS29-210ENST00000552130 1057 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
PCDH9Q9HC56 AC092078.1-201ENST00000558370 325 ntTSL 3 BASIC5.97□□□□□ -1.45
PCDH9Q9HC56 AC087286.2-201ENST00000558980 660 ntTSL 3 BASIC5.97□□□□□ -1.45
PCDH9Q9HC56 ZNF528-211ENST00000598192 625 ntTSL 3 BASIC5.97□□□□□ -1.45
PCDH9Q9HC56 AC079315.1-201ENST00000602952 623 ntBASIC5.97□□□□□ -1.45
PCDH9Q9HC56 AL109954.2-201ENST00000611020 530 ntTSL 4 BASIC5.97□□□□□ -1.45
PCDH9Q9HC56 KLRF1-208ENST00000617889 1241 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
PCDH9Q9HC56 AL137789.1-204ENST00000623503 666 ntTSL 5 BASIC5.97□□□□□ -1.45
PCDH9Q9HC56 LINC01206-233ENST00000630063 878 ntTSL 5 BASIC5.97□□□□□ -1.45
PCDH9Q9HC56 DYNC1I2-202ENST00000397119 2604 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
PCDH9Q9HC56 ZNF195-201ENST00000005082 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC5.97□□□□□ -1.45
PCDH9Q9HC56 AP000432.2-201ENST00000624164 2048 ntBASIC5.97□□□□□ -1.45
PCDH9Q9HC56 LINC01206-204ENST00000482787 9580 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
PCDH9Q9HC56 METTL6-203ENST00000443029 4020 ntAPPRIS P1 TSL 5 BASIC5.97□□□□□ -1.45
PCDH9Q9HC56 AC027088.4-201ENST00000611559 1947 ntBASIC5.97□□□□□ -1.45
PCDH9Q9HC56 AC018628.1-201ENST00000624147 3819 ntBASIC5.97□□□□□ -1.45
PCDH9Q9HC56 PARP4P2-201ENST00000446672 3326 ntBASIC5.97□□□□□ -1.45
PCDH9Q9HC56 MFSD8-219ENST00000641228 2559 ntBASIC5.97□□□□□ -1.45
PCDH9Q9HC56 RAP1GDS1-202ENST00000339360 2092 ntAPPRIS ALT1 TSL 1 (best) BASIC5.97□□□□□ -1.45
PCDH9Q9HC56 EOGT-208ENST00000540764 1584 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
PCDH9Q9HC56 SLC9B1P1-201ENST00000331172 1337 ntBASIC5.97□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 93.6 ms