Protein–RNA interactions for Protein: Q9HAW0

BRF2, Transcription factor IIIB 50 kDa subunit, humanhuman

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRF2Q9HAW0 AC024601.1-201ENST00000427247 524 ntTSL 3 BASIC5.76□□□□□ -1.49
BRF2Q9HAW0 LINC01501-201ENST00000427523 409 ntTSL 3 BASIC5.76□□□□□ -1.49
BRF2Q9HAW0 ZNF965P-201ENST00000432501 817 ntBASIC5.76□□□□□ -1.49
BRF2Q9HAW0 AC010240.2-201ENST00000445363 1205 ntBASIC5.76□□□□□ -1.49
BRF2Q9HAW0 SUMO2P1-206ENST00000445436 284 ntBASIC5.76□□□□□ -1.49
BRF2Q9HAW0 LINC01809-201ENST00000448431 303 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
BRF2Q9HAW0 AL158835.1-204ENST00000449693 371 ntTSL 3 BASIC5.76□□□□□ -1.49
BRF2Q9HAW0 AKR1C2-203ENST00000455190 1098 ntTSL 2 BASIC5.76□□□□□ -1.49
BRF2Q9HAW0 AC078785.2-201ENST00000462010 1253 ntTSL 3 BASIC5.76□□□□□ -1.49
BRF2Q9HAW0 AC107015.1-201ENST00000466902 747 ntBASIC5.76□□□□□ -1.49
BRF2Q9HAW0 AC092590.1-201ENST00000471672 737 ntTSL 3 BASIC5.76□□□□□ -1.49
BRF2Q9HAW0 AC092958.2-201ENST00000476987 492 ntTSL 3 BASIC5.76□□□□□ -1.49
BRF2Q9HAW0 HMGB1P3-201ENST00000502802 616 ntBASIC5.76□□□□□ -1.49
BRF2Q9HAW0 AC021146.7-201ENST00000509604 775 ntBASIC5.76□□□□□ -1.49
BRF2Q9HAW0 HMGN1P17-201ENST00000513734 295 ntBASIC5.76□□□□□ -1.49
BRF2Q9HAW0 AC034244.2-201ENST00000514668 858 ntBASIC5.76□□□□□ -1.49
BRF2Q9HAW0 LINC00500-201ENST00000515860 539 ntTSL 4 BASIC5.76□□□□□ -1.49
BRF2Q9HAW0 RN7SKP288-201ENST00000516227 268 ntBASIC5.76□□□□□ -1.49
BRF2Q9HAW0 PYDC2-201ENST00000518817 294 ntAPPRIS P1 BASIC5.76□□□□□ -1.49
BRF2Q9HAW0 IGKV1OR22-1-201ENST00000521497 360 ntBASIC5.76□□□□□ -1.49
BRF2Q9HAW0 AC113423.1-201ENST00000523279 289 ntTSL 3 BASIC5.76□□□□□ -1.49
BRF2Q9HAW0 IFNG-AS1-203ENST00000541715 902 ntTSL 3 BASIC5.76□□□□□ -1.49
BRF2Q9HAW0 RNASE9-205ENST00000553706 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC5.76□□□□□ -1.49
BRF2Q9HAW0 NPM1P42-201ENST00000560329 862 ntBASIC5.76□□□□□ -1.49
BRF2Q9HAW0 RORA-AS2-202ENST00000561413 576 ntTSL 4 BASIC5.76□□□□□ -1.49
BRF2Q9HAW0 AC005479.3-201ENST00000602790 431 ntBASIC5.76□□□□□ -1.49
BRF2Q9HAW0 SMIM12P1-201ENST00000603004 274 ntBASIC5.76□□□□□ -1.49
BRF2Q9HAW0 CR589904.2-201ENST00000612533 440 ntBASIC5.76□□□□□ -1.49
BRF2Q9HAW0 AC106730.3-201ENST00000624568 641 ntBASIC5.76□□□□□ -1.49
BRF2Q9HAW0 AL357562.1-201ENST00000624911 609 ntBASIC5.76□□□□□ -1.49
BRF2Q9HAW0 NOL4-203ENST00000538587 1979 ntTSL 2 BASIC5.76□□□□□ -1.49
BRF2Q9HAW0 PREPL-216ENST00000541738 6049 ntTSL 2 BASIC5.76□□□□□ -1.49
BRF2Q9HAW0 CLCN3-201ENST00000347613 3635 ntAPPRIS P4 TSL 1 (best) BASIC5.76□□□□□ -1.49
BRF2Q9HAW0 CLCC1-204ENST00000369968 4151 ntTSL 5 BASIC5.76□□□□□ -1.49
BRF2Q9HAW0 NLN-202ENST00000502464 8354 ntTSL 5 BASIC5.76□□□□□ -1.49
BRF2Q9HAW0 RLIMP2-201ENST00000427891 1563 ntBASIC5.76□□□□□ -1.49
BRF2Q9HAW0 ADGRL3-218ENST00000514996 4731 ntAPPRIS ALT2 TSL 5 BASIC5.76□□□□□ -1.49
BRF2Q9HAW0 CASC19-281ENST00000642118 1554 ntBASIC5.76□□□□□ -1.49
BRF2Q9HAW0 AC027575.3-201ENST00000583058 2747 ntBASIC5.76□□□□□ -1.49
BRF2Q9HAW0 AC007342.5-201ENST00000571340 2142 ntBASIC5.75□□□□□ -1.49
BRF2Q9HAW0 RIC3-202ENST00000335425 5223 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
BRF2Q9HAW0 RNF145-201ENST00000274542 3364 ntTSL 2 BASIC5.75□□□□□ -1.49
BRF2Q9HAW0 GAS2L3-203ENST00000539410 2229 ntAPPRIS P1 TSL 2 BASIC5.75□□□□□ -1.49
BRF2Q9HAW0 AP2B1-211ENST00000610402 3204 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
BRF2Q9HAW0 FAM205BP-203ENST00000455647 3752 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
BRF2Q9HAW0 NCOA7-201ENST00000229634 2998 ntAPPRIS ALT2 TSL 2 BASIC5.75□□□□□ -1.49
BRF2Q9HAW0 TRIM22-201ENST00000379965 2989 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
BRF2Q9HAW0 AC083837.1-201ENST00000565297 2994 ntBASIC5.75□□□□□ -1.49
BRF2Q9HAW0 PSMA3-201ENST00000216455 970 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
BRF2Q9HAW0 XAGE5-201ENST00000351072 478 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
BRF2Q9HAW0 RNU1-134P-201ENST00000362935 165 ntBASIC5.75□□□□□ -1.49
BRF2Q9HAW0 RNA5SP211-201ENST00000365516 117 ntBASIC5.75□□□□□ -1.49
BRF2Q9HAW0 TINAG-203ENST00000370869 782 ntTSL 3 BASIC5.75□□□□□ -1.49
BRF2Q9HAW0 IFNB1-201ENST00000380232 859 ntAPPRIS P1 BASIC5.75□□□□□ -1.49
BRF2Q9HAW0 SPINK13-201ENST00000398450 509 ntAPPRIS P2 TSL 1 (best) BASIC5.75□□□□□ -1.49
BRF2Q9HAW0 AL132875.1-201ENST00000403623 949 ntBASIC5.75□□□□□ -1.49
BRF2Q9HAW0 AL512353.1-202ENST00000416809 627 ntTSL 3 BASIC5.75□□□□□ -1.49
BRF2Q9HAW0 RPS26P13-201ENST00000419030 330 ntBASIC5.75□□□□□ -1.49
BRF2Q9HAW0 AF064858.3-201ENST00000419664 509 ntTSL 5 BASIC5.75□□□□□ -1.49
BRF2Q9HAW0 OR5W1P-201ENST00000423705 938 ntBASIC5.75□□□□□ -1.49
BRF2Q9HAW0 MTND4P24-201ENST00000424002 397 ntBASIC5.75□□□□□ -1.49
BRF2Q9HAW0 AC092651.1-201ENST00000426110 312 ntBASIC5.75□□□□□ -1.49
BRF2Q9HAW0 AC090505.2-201ENST00000427064 464 ntTSL 3 BASIC5.75□□□□□ -1.49
BRF2Q9HAW0 AL162408.1-201ENST00000428853 433 ntTSL 5 BASIC5.75□□□□□ -1.49
BRF2Q9HAW0 HNRNPA1P18-201ENST00000433537 927 ntBASIC5.75□□□□□ -1.49
BRF2Q9HAW0 USP24P1-201ENST00000433802 779 ntBASIC5.75□□□□□ -1.49
BRF2Q9HAW0 ZNF736P1Y-201ENST00000440402 1276 ntBASIC5.75□□□□□ -1.49
BRF2Q9HAW0 AL138921.1-201ENST00000444359 846 ntTSL 5 BASIC5.75□□□□□ -1.49
BRF2Q9HAW0 AC079117.1-201ENST00000445178 1000 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
BRF2Q9HAW0 AL050338.1-201ENST00000445585 786 ntTSL 3 BASIC5.75□□□□□ -1.49
BRF2Q9HAW0 AL354793.1-201ENST00000446028 713 ntTSL 3 BASIC5.75□□□□□ -1.49
BRF2Q9HAW0 FTLP8-201ENST00000446770 267 ntBASIC5.75□□□□□ -1.49
BRF2Q9HAW0 AP002856.1-201ENST00000447864 562 ntTSL 4 BASIC5.75□□□□□ -1.49
BRF2Q9HAW0 AC073476.1-201ENST00000452854 407 ntBASIC5.75□□□□□ -1.49
BRF2Q9HAW0 AC104164.1-201ENST00000460282 590 ntBASIC5.75□□□□□ -1.49
BRF2Q9HAW0 RN7SL254P-201ENST00000460609 284 ntBASIC5.75□□□□□ -1.49
BRF2Q9HAW0 RN7SL612P-201ENST00000497704 295 ntBASIC5.75□□□□□ -1.49
BRF2Q9HAW0 AC021087.2-201ENST00000504656 1203 ntBASIC5.75□□□□□ -1.49
BRF2Q9HAW0 LINC02360-201ENST00000506195 657 ntTSL 3 BASIC5.75□□□□□ -1.49
BRF2Q9HAW0 AC006296.2-201ENST00000507932 764 ntTSL 3 BASIC5.75□□□□□ -1.49
BRF2Q9HAW0 AC025768.1-201ENST00000510057 267 ntBASIC5.75□□□□□ -1.49
BRF2Q9HAW0 AC108727.2-201ENST00000512277 392 ntTSL 3 BASIC5.75□□□□□ -1.49
BRF2Q9HAW0 AC008957.1-202ENST00000512329 681 ntTSL 3 BASIC5.75□□□□□ -1.49
BRF2Q9HAW0 LINC00589-202ENST00000518623 938 ntTSL 4 BASIC5.75□□□□□ -1.49
BRF2Q9HAW0 HMGB1P46-201ENST00000520062 610 ntBASIC5.75□□□□□ -1.49
BRF2Q9HAW0 AC090692.1-202ENST00000525363 607 ntTSL 4 BASIC5.75□□□□□ -1.49
BRF2Q9HAW0 AP000842.2-202ENST00000526211 569 ntTSL 4 BASIC5.75□□□□□ -1.49
BRF2Q9HAW0 CREBZF-209ENST00000534224 545 ntTSL 4 BASIC5.75□□□□□ -1.49
BRF2Q9HAW0 AL590385.2-201ENST00000537821 553 ntTSL 5 BASIC5.75□□□□□ -1.49
BRF2Q9HAW0 AL118556.1-201ENST00000555257 502 ntTSL 2 BASIC5.75□□□□□ -1.49
BRF2Q9HAW0 AC007346.2-201ENST00000564816 892 ntBASIC5.75□□□□□ -1.49
BRF2Q9HAW0 LINC00556-201ENST00000569603 412 ntBASIC5.75□□□□□ -1.49
BRF2Q9HAW0 AL163952.1-202ENST00000569625 600 ntBASIC5.75□□□□□ -1.49
BRF2Q9HAW0 AP000897.2-201ENST00000579509 1057 ntTSL 3 BASIC5.75□□□□□ -1.49
BRF2Q9HAW0 TRIM37-212ENST00000584889 353 ntTSL 2 BASIC5.75□□□□□ -1.49
BRF2Q9HAW0 TEX26-AS1-204ENST00000585582 853 ntTSL 5 BASIC5.75□□□□□ -1.49
BRF2Q9HAW0 SNX6P1-201ENST00000601728 1224 ntBASIC5.75□□□□□ -1.49
BRF2Q9HAW0 AC091769.2-201ENST00000605385 479 ntTSL 4 BASIC5.75□□□□□ -1.49
BRF2Q9HAW0 AC015849.2-201ENST00000605738 409 ntBASIC5.75□□□□□ -1.49
BRF2Q9HAW0 AC004241.3-201ENST00000611728 517 ntBASIC5.75□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 94.3 ms