Protein–RNA interactions for Protein: Q9BY43

CHMP4A, Charged multivesicular body protein 4a, humanhuman

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4AQ9BY43 OR10A2-201ENST00000307322 1053 ntAPPRIS P1 BASIC7.78□□□□□ -1.16
CHMP4AQ9BY43 PKIB-203ENST00000368446 556 ntTSL 2 BASIC7.78□□□□□ -1.16
CHMP4AQ9BY43 SUGT1P2-201ENST00000379452 992 ntBASIC7.78□□□□□ -1.16
CHMP4AQ9BY43 IFNA8-201ENST00000380205 1039 ntAPPRIS P1 BASIC7.78□□□□□ -1.16
CHMP4AQ9BY43 OR7E156P-201ENST00000400303 464 ntBASIC7.78□□□□□ -1.16
CHMP4AQ9BY43 ST13P16-201ENST00000401760 781 ntBASIC7.78□□□□□ -1.16
CHMP4AQ9BY43 AC016739.1-201ENST00000405359 345 ntBASIC7.78□□□□□ -1.16
CHMP4AQ9BY43 MIR1282-201ENST00000408865 101 ntBASIC7.78□□□□□ -1.16
CHMP4AQ9BY43 RN7SKP240-201ENST00000410583 375 ntBASIC7.78□□□□□ -1.16
CHMP4AQ9BY43 MYL6P5-201ENST00000412707 459 ntBASIC7.78□□□□□ -1.16
CHMP4AQ9BY43 LINC01501-201ENST00000427523 409 ntTSL 3 BASIC7.78□□□□□ -1.16
CHMP4AQ9BY43 AC012668.2-201ENST00000431727 503 ntTSL 3 BASIC7.78□□□□□ -1.16
CHMP4AQ9BY43 AL022310.1-201ENST00000436974 690 ntTSL 2 BASIC7.78□□□□□ -1.16
CHMP4AQ9BY43 RAD1P2-201ENST00000446414 663 ntBASIC7.78□□□□□ -1.16
CHMP4AQ9BY43 AL122020.1-201ENST00000472287 459 ntBASIC7.78□□□□□ -1.16
CHMP4AQ9BY43 AC025566.1-201ENST00000477153 490 ntTSL 3 BASIC7.78□□□□□ -1.16
CHMP4AQ9BY43 AC018442.3-201ENST00000523025 183 ntBASIC7.78□□□□□ -1.16
CHMP4AQ9BY43 TRIM77BP-201ENST00000524985 1119 ntBASIC7.78□□□□□ -1.16
CHMP4AQ9BY43 AP002812.2-201ENST00000525594 585 ntTSL 4 BASIC7.78□□□□□ -1.16
CHMP4AQ9BY43 OR52B2-201ENST00000530810 1079 ntAPPRIS P1 BASIC7.78□□□□□ -1.16
CHMP4AQ9BY43 U95743.1-201ENST00000573369 1001 ntTSL 5 BASIC7.78□□□□□ -1.16
CHMP4AQ9BY43 AP005119.1-201ENST00000580956 292 ntBASIC7.78□□□□□ -1.16
CHMP4AQ9BY43 AC005726.4-201ENST00000582858 458 ntBASIC7.78□□□□□ -1.16
CHMP4AQ9BY43 AC104984.2-201ENST00000582938 385 ntTSL 3 BASIC7.78□□□□□ -1.16
CHMP4AQ9BY43 MIR4310-201ENST00000582950 57 ntBASIC7.78□□□□□ -1.16
CHMP4AQ9BY43 AC067773.1-201ENST00000603284 1094 ntBASIC7.78□□□□□ -1.16
CHMP4AQ9BY43 CLPS-202ENST00000616014 436 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
CHMP4AQ9BY43 AC092683.1-207ENST00000620051 837 ntTSL 2 BASIC7.78□□□□□ -1.16
CHMP4AQ9BY43 AC096708.4-201ENST00000620563 552 ntBASIC7.78□□□□□ -1.16
CHMP4AQ9BY43 ZNF479-203ENST00000620639 1239 ntTSL 5 BASIC7.78□□□□□ -1.16
CHMP4AQ9BY43 AC021422.1-201ENST00000621212 473 ntBASIC7.78□□□□□ -1.16
CHMP4AQ9BY43 PLEKHH2-201ENST00000282406 6981 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
CHMP4AQ9BY43 GCNT2-201ENST00000265012 4214 ntAPPRIS P3 TSL 1 (best) BASIC7.78□□□□□ -1.16
CHMP4AQ9BY43 SLAIN1-204ENST00000358679 2075 ntAPPRIS P3 TSL 2 BASIC7.78□□□□□ -1.16
CHMP4AQ9BY43 IGIP-201ENST00000333305 3458 ntAPPRIS P1 BASIC7.78□□□□□ -1.16
CHMP4AQ9BY43 ECT2L-205ENST00000541398 4483 ntAPPRIS P1 TSL 5 BASIC7.78□□□□□ -1.16
CHMP4AQ9BY43 THAP6-201ENST00000311638 3549 ntAPPRIS P3 TSL 1 (best) BASIC7.78□□□□□ -1.16
CHMP4AQ9BY43 AP005212.5-201ENST00000577614 3505 ntTSL 5 BASIC7.78□□□□□ -1.16
CHMP4AQ9BY43 Z95114.1-201ENST00000624264 14574 ntBASIC7.78□□□□□ -1.16
CHMP4AQ9BY43 OR10K1-203ENST00000641432 3775 ntAPPRIS P1 BASIC7.77□□□□□ -1.16
CHMP4AQ9BY43 CCDC178-202ENST00000383096 3391 ntAPPRIS ALT2 TSL 5 BASIC7.77□□□□□ -1.16
CHMP4AQ9BY43 CLEC4E-201ENST00000299663 2159 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
CHMP4AQ9BY43 AC024587.1-201ENST00000505925 2157 ntBASIC7.77□□□□□ -1.17
CHMP4AQ9BY43 RUBCNL-205ENST00000389908 3956 ntAPPRIS P3 TSL 2 BASIC7.77□□□□□ -1.17
CHMP4AQ9BY43 CRYGS-201ENST00000307944 759 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
CHMP4AQ9BY43 CDKL4-202ENST00000395035 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC7.77□□□□□ -1.17
CHMP4AQ9BY43 RNF212B-201ENST00000399905 1071 ntTSL 5 BASIC7.77□□□□□ -1.17
CHMP4AQ9BY43 PTCD2P2-201ENST00000415579 1095 ntBASIC7.77□□□□□ -1.17
CHMP4AQ9BY43 AL645465.1-201ENST00000417765 642 ntTSL 3 BASIC7.77□□□□□ -1.17
CHMP4AQ9BY43 BX284632.2-201ENST00000421091 399 ntBASIC7.77□□□□□ -1.17
CHMP4AQ9BY43 AL360227.1-201ENST00000425364 433 ntTSL 3 BASIC7.77□□□□□ -1.17
CHMP4AQ9BY43 Z85994.2-201ENST00000434327 452 ntBASIC7.77□□□□□ -1.17
CHMP4AQ9BY43 AL512593.1-201ENST00000444758 779 ntBASIC7.77□□□□□ -1.17
CHMP4AQ9BY43 HMGN1P2-201ENST00000445197 310 ntBASIC7.77□□□□□ -1.17
CHMP4AQ9BY43 AC004692.2-201ENST00000457315 355 ntTSL 3 BASIC7.77□□□□□ -1.17
CHMP4AQ9BY43 AC073594.1-201ENST00000462065 364 ntBASIC7.77□□□□□ -1.17
CHMP4AQ9BY43 AC060775.1-201ENST00000518241 520 ntBASIC7.77□□□□□ -1.17
CHMP4AQ9BY43 UQCRB-204ENST00000518406 595 ntTSL 5 BASIC7.77□□□□□ -1.17
CHMP4AQ9BY43 AC008601.1-201ENST00000519892 527 ntTSL 4 BASIC7.77□□□□□ -1.17
CHMP4AQ9BY43 TPM3P3-201ENST00000521343 354 ntBASIC7.77□□□□□ -1.17
CHMP4AQ9BY43 WBP1LP3-201ENST00000523033 208 ntBASIC7.77□□□□□ -1.17
CHMP4AQ9BY43 AP000424.2-201ENST00000523784 233 ntTSL 3 BASIC7.77□□□□□ -1.17
CHMP4AQ9BY43 AP000648.1-201ENST00000529682 397 ntBASIC7.77□□□□□ -1.17
CHMP4AQ9BY43 AC087888.1-201ENST00000550884 1254 ntBASIC7.77□□□□□ -1.17
CHMP4AQ9BY43 VDAC1P8-204ENST00000589489 997 ntTSL 5 BASIC7.77□□□□□ -1.17
CHMP4AQ9BY43 Z98949.1-228ENST00000595093 798 ntTSL 5 BASIC7.77□□□□□ -1.17
CHMP4AQ9BY43 AC084373.1-201ENST00000603311 235 ntBASIC7.77□□□□□ -1.17
CHMP4AQ9BY43 AL031601.1-201ENST00000605702 394 ntBASIC7.77□□□□□ -1.17
CHMP4AQ9BY43 AL365181.4-201ENST00000609800 547 ntBASIC7.77□□□□□ -1.17
CHMP4AQ9BY43 AL096712.1-201ENST00000614561 159 ntBASIC7.77□□□□□ -1.17
CHMP4AQ9BY43 MIR6861-201ENST00000618657 64 ntBASIC7.77□□□□□ -1.17
CHMP4AQ9BY43 AL662795.2-201ENST00000624252 3706 ntBASIC7.77□□□□□ -1.17
CHMP4AQ9BY43 SLCO1B7-201ENST00000421593 1923 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
CHMP4AQ9BY43 ZNF112-202ENST00000354340 3654 ntAPPRIS P3 TSL 1 (best) BASIC7.77□□□□□ -1.17
CHMP4AQ9BY43 ZNF624-201ENST00000311331 4241 ntAPPRIS P1 TSL 2 BASIC7.77□□□□□ -1.17
CHMP4AQ9BY43 OR2T29-202ENST00000641069 2637 ntAPPRIS P1 BASIC7.77□□□□□ -1.17
CHMP4AQ9BY43 NLRP11-204ENST00000592953 3077 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
CHMP4AQ9BY43 ESRRG-206ENST00000366938 5274 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
CHMP4AQ9BY43 HELZ-207ENST00000580168 6279 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
CHMP4AQ9BY43 C4orf36-203ENST00000473559 2306 ntAPPRIS P1 TSL 2 BASIC7.77□□□□□ -1.17
CHMP4AQ9BY43 ZNF542P-202ENST00000467807 3209 ntTSL 1 (best) BASIC7.76□□□□□ -1.17
CHMP4AQ9BY43 AC062029.1-202ENST00000606164 3651 ntBASIC7.76□□□□□ -1.17
CHMP4AQ9BY43 ZNF415-203ENST00000500065 2496 ntAPPRIS ALT2 TSL 4 BASIC7.76□□□□□ -1.17
CHMP4AQ9BY43 SYNJ2BP-201ENST00000256366 7015 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
CHMP4AQ9BY43 PKIA-201ENST00000352966 1736 ntAPPRIS P1 TSL 2 BASIC7.76□□□□□ -1.17
CHMP4AQ9BY43 ZNF283-203ENST00000588797 2428 ntTSL 2 BASIC7.76□□□□□ -1.17
CHMP4AQ9BY43 SPINK7-201ENST00000274565 557 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
CHMP4AQ9BY43 MIR7-1-201ENST00000384871 110 ntBASIC7.76□□□□□ -1.17
CHMP4AQ9BY43 SLC3A1-203ENST00000409294 792 ntTSL 2 BASIC7.76□□□□□ -1.17
CHMP4AQ9BY43 HSD17B7P1-201ENST00000412419 1017 ntBASIC7.76□□□□□ -1.17
CHMP4AQ9BY43 LINC00626-201ENST00000420691 955 ntTSL 1 (best) BASIC7.76□□□□□ -1.17
CHMP4AQ9BY43 AC016027.5-201ENST00000427227 210 ntBASIC7.76□□□□□ -1.17
CHMP4AQ9BY43 AC046176.1-201ENST00000435260 1170 ntBASIC7.76□□□□□ -1.17
CHMP4AQ9BY43 RPL12P11-201ENST00000439970 501 ntBASIC7.76□□□□□ -1.17
CHMP4AQ9BY43 EIF5AP4-201ENST00000441206 465 ntBASIC7.76□□□□□ -1.17
CHMP4AQ9BY43 BBIP1-208ENST00000454061 812 ntTSL 1 (best) BASIC7.76□□□□□ -1.17
CHMP4AQ9BY43 GEMIN2P1-201ENST00000454246 752 ntBASIC7.76□□□□□ -1.17
CHMP4AQ9BY43 RPSAP39-201ENST00000467439 883 ntBASIC7.76□□□□□ -1.17
CHMP4AQ9BY43 TRIM36-IT1-201ENST00000503723 881 ntBASIC7.76□□□□□ -1.17
CHMP4AQ9BY43 LINC01091-201ENST00000508111 645 ntTSL 5 BASIC7.76□□□□□ -1.17
Retrieved 100 of 98,524 protein–RNA pairs in 88.5 ms