Protein–RNA interactions for Protein: Q99909

SSX3, Protein SSX3, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX3Q99909 RNU6-819P-201ENST00000364116 107 ntBASIC5.14□□□□□ -1.59
SSX3Q99909 DHFRP5-201ENST00000406944 564 ntBASIC5.14□□□□□ -1.59
SSX3Q99909 RNA5SP296-201ENST00000410523 111 ntBASIC5.14□□□□□ -1.59
SSX3Q99909 LINC01031-201ENST00000420807 779 ntTSL 3 BASIC5.14□□□□□ -1.59
SSX3Q99909 RPL12P16-201ENST00000431098 498 ntBASIC5.14□□□□□ -1.59
SSX3Q99909 MAJIN-202ENST00000432175 838 ntAPPRIS P3 TSL 1 (best) BASIC5.14□□□□□ -1.59
SSX3Q99909 AL022310.1-201ENST00000436974 690 ntTSL 2 BASIC5.14□□□□□ -1.59
SSX3Q99909 AL450003.1-201ENST00000439447 455 ntTSL 2 BASIC5.14□□□□□ -1.59
SSX3Q99909 AL645936.1-201ENST00000441979 518 ntBASIC5.14□□□□□ -1.59
SSX3Q99909 XXYLT1-AS2-202ENST00000447975 784 ntTSL 2 BASIC5.14□□□□□ -1.59
SSX3Q99909 AL591363.1-201ENST00000450091 483 ntBASIC5.14□□□□□ -1.59
SSX3Q99909 AC073409.1-201ENST00000451749 269 ntTSL 3 BASIC5.14□□□□□ -1.59
SSX3Q99909 RN7SL254P-201ENST00000460609 284 ntBASIC5.14□□□□□ -1.59
SSX3Q99909 AP002453.1-201ENST00000492327 668 ntBASIC5.14□□□□□ -1.59
SSX3Q99909 RPL37P23-201ENST00000492641 294 ntBASIC5.14□□□□□ -1.59
SSX3Q99909 GYPA-203ENST00000503627 318 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
SSX3Q99909 AK4P6-201ENST00000505168 528 ntBASIC5.14□□□□□ -1.59
SSX3Q99909 GIN1-203ENST00000508629 1040 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
SSX3Q99909 AC010425.1-201ENST00000511734 554 ntTSL 4 BASIC5.14□□□□□ -1.59
SSX3Q99909 AC093599.1-201ENST00000515232 562 ntTSL 4 BASIC5.14□□□□□ -1.59
SSX3Q99909 TMEM97P2-201ENST00000517841 403 ntBASIC5.14□□□□□ -1.59
SSX3Q99909 LINC02420-201ENST00000543387 741 ntTSL 5 BASIC5.14□□□□□ -1.59
SSX3Q99909 AL845552.1-201ENST00000556820 323 ntBASIC5.14□□□□□ -1.59
SSX3Q99909 AC009268.1-201ENST00000561352 1203 ntBASIC5.14□□□□□ -1.59
SSX3Q99909 AC139099.1-201ENST00000573737 976 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
SSX3Q99909 MIR4502-201ENST00000580432 81 ntBASIC5.14□□□□□ -1.59
SSX3Q99909 AC011824.3-201ENST00000585093 563 ntTSL 4 BASIC5.14□□□□□ -1.59
SSX3Q99909 AP005131.3-201ENST00000590042 665 ntTSL 3 BASIC5.14□□□□□ -1.59
SSX3Q99909 LINC01435-212ENST00000601212 742 ntTSL 5 BASIC5.14□□□□□ -1.59
SSX3Q99909 RPSAP75-201ENST00000605848 301 ntBASIC5.14□□□□□ -1.59
SSX3Q99909 AL022394.1-201ENST00000606979 292 ntBASIC5.14□□□□□ -1.59
SSX3Q99909 CDC37L1-AS1-202ENST00000609131 235 ntTSL 2 BASIC5.14□□□□□ -1.59
SSX3Q99909 Metazoa_SRP.38-201ENST00000615981 254 ntBASIC5.14□□□□□ -1.59
SSX3Q99909 LINC02109-206ENST00000629527 854 ntTSL 5 BASIC5.14□□□□□ -1.59
SSX3Q99909 LINC02341-202ENST00000637462 1295 ntTSL 5 BASIC5.14□□□□□ -1.59
SSX3Q99909 DNAH5-201ENST00000265104 15633 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
SSX3Q99909 AC044839.1-206ENST00000635559 1324 ntTSL 5 BASIC5.14□□□□□ -1.59
SSX3Q99909 NBPF19-201ENST00000369227 3670 ntTSL 5 BASIC5.14□□□□□ -1.59
SSX3Q99909 NBPF20-203ENST00000594479 3670 ntTSL 5 BASIC5.14□□□□□ -1.59
SSX3Q99909 NBPF14-210ENST00000621066 3670 ntTSL 5 BASIC5.14□□□□□ -1.59
SSX3Q99909 NOL8-221ENST00000542053 3393 ntTSL 5 BASIC5.14□□□□□ -1.59
SSX3Q99909 KIF20A-205ENST00000508792 2935 ntTSL 2 BASIC5.13□□□□□ -1.59
SSX3Q99909 C15orf41-201ENST00000338183 2578 ntTSL 5 BASIC5.13□□□□□ -1.59
SSX3Q99909 RRH-201ENST00000317735 1455 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
SSX3Q99909 HYKK-206ENST00000569878 4097 ntAPPRIS P1 TSL 5 BASIC5.13□□□□□ -1.59
SSX3Q99909 LINC01505-205ENST00000636028 2298 ntTSL 5 BASIC5.13□□□□□ -1.59
SSX3Q99909 SHQ1P1-201ENST00000437111 1544 ntBASIC5.13□□□□□ -1.59
SSX3Q99909 ALS2CR12-202ENST00000392257 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC5.13□□□□□ -1.59
SSX3Q99909 PRUNE2-204ENST00000376718 12584 ntAPPRIS P3 TSL 5 BASIC5.13□□□□□ -1.59
SSX3Q99909 PIAS2-204ENST00000585916 11075 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
SSX3Q99909 CLRN1-AS1-201ENST00000465576 2045 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
SSX3Q99909 AL078621.3-201ENST00000623707 2042 ntBASIC5.13□□□□□ -1.59
SSX3Q99909 PKN2-202ENST00000370513 2890 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
SSX3Q99909 AL121768.1-201ENST00000613917 2544 ntBASIC5.13□□□□□ -1.59
SSX3Q99909 OR4D5-201ENST00000307033 1095 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
SSX3Q99909 DYNC2H1-201ENST00000334267 2984 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
SSX3Q99909 ZNF669-202ENST00000366500 489 ntTSL 3 BASIC5.13□□□□□ -1.59
SSX3Q99909 OR51A2-201ENST00000380371 942 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
SSX3Q99909 TRAJ25-201ENST00000390512 60 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
SSX3Q99909 AL136131.1-201ENST00000406079 803 ntBASIC5.13□□□□□ -1.59
SSX3Q99909 AL139805.1-201ENST00000407837 289 ntBASIC5.13□□□□□ -1.59
SSX3Q99909 RNA5SP198-201ENST00000410376 127 ntBASIC5.13□□□□□ -1.59
SSX3Q99909 AL034397.2-201ENST00000424241 857 ntTSL 2 BASIC5.13□□□□□ -1.59
SSX3Q99909 PLA2G12AP2-201ENST00000424744 264 ntBASIC5.13□□□□□ -1.59
SSX3Q99909 AC092865.3-201ENST00000425390 1026 ntBASIC5.13□□□□□ -1.59
SSX3Q99909 AC092651.1-201ENST00000426110 312 ntBASIC5.13□□□□□ -1.59
SSX3Q99909 HMGN2P27-201ENST00000427352 270 ntBASIC5.13□□□□□ -1.59
SSX3Q99909 AC099060.1-201ENST00000427806 448 ntTSL 3 BASIC5.13□□□□□ -1.59
SSX3Q99909 AC002069.1-201ENST00000429649 1159 ntBASIC5.13□□□□□ -1.59
SSX3Q99909 LCE6A-201ENST00000431011 628 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
SSX3Q99909 AL450384.1-201ENST00000433526 413 ntTSL 2 BASIC5.13□□□□□ -1.59
SSX3Q99909 AC092162.2-201ENST00000438143 532 ntTSL 4 BASIC5.13□□□□□ -1.59
SSX3Q99909 AL138899.2-201ENST00000439139 499 ntBASIC5.13□□□□□ -1.59
SSX3Q99909 AC079922.1-201ENST00000443291 359 ntBASIC5.13□□□□□ -1.59
SSX3Q99909 AC113331.2-201ENST00000445557 926 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
SSX3Q99909 HMGB1P7-201ENST00000450921 612 ntBASIC5.13□□□□□ -1.59
SSX3Q99909 AC074286.1-201ENST00000452002 544 ntTSL 4 BASIC5.13□□□□□ -1.59
SSX3Q99909 RPL7L1P3-201ENST00000455249 689 ntBASIC5.13□□□□□ -1.59
SSX3Q99909 RN7SL643P-201ENST00000471845 291 ntBASIC5.13□□□□□ -1.59
SSX3Q99909 RN7SL369P-201ENST00000477138 299 ntBASIC5.13□□□□□ -1.59
SSX3Q99909 RPL5P22-201ENST00000480199 884 ntBASIC5.13□□□□□ -1.59
SSX3Q99909 RN7SL714P-201ENST00000487050 298 ntBASIC5.13□□□□□ -1.59
SSX3Q99909 ATG10-AS1-201ENST00000504846 648 ntBASIC5.13□□□□□ -1.59
SSX3Q99909 SNX18P25-201ENST00000510539 758 ntBASIC5.13□□□□□ -1.59
SSX3Q99909 SNORA70.17-201ENST00000516449 133 ntBASIC5.13□□□□□ -1.59
SSX3Q99909 TNFRSF17-201ENST00000053243 994 ntAPPRIS P2 TSL 1 (best) BASIC5.13□□□□□ -1.59
SSX3Q99909 AC068993.1-201ENST00000546724 589 ntBASIC5.13□□□□□ -1.59
SSX3Q99909 AC026826.3-201ENST00000561747 158 ntBASIC5.13□□□□□ -1.59
SSX3Q99909 CD24P2-201ENST00000565486 219 ntBASIC5.13□□□□□ -1.59
SSX3Q99909 LINC02186-201ENST00000575767 885 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
SSX3Q99909 ZNF682-208ENST00000596019 552 ntTSL 5 BASIC5.13□□□□□ -1.59
SSX3Q99909 AL133406.3-201ENST00000606817 541 ntBASIC5.13□□□□□ -1.59
SSX3Q99909 AC024884.1-201ENST00000620583 399 ntBASIC5.13□□□□□ -1.59
SSX3Q99909 OR2AK2-202ENST00000641852 1008 ntAPPRIS P2 BASIC5.13□□□□□ -1.59
SSX3Q99909 OR7E91P-202ENST00000642062 1198 ntBASIC5.13□□□□□ -1.59
SSX3Q99909 AC105235.1-201ENST00000623208 1816 ntBASIC5.13□□□□□ -1.59
SSX3Q99909 CNTN1-208ENST00000551295 5557 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
SSX3Q99909 RBM41-201ENST00000372479 1662 ntAPPRIS P3 TSL 1 (best) BASIC5.12□□□□□ -1.59
SSX3Q99909 LINC00504-201ENST00000505089 4672 ntTSL 2 BASIC5.12□□□□□ -1.59
SSX3Q99909 AC005674.2-201ENST00000561486 3510 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 139.7 ms