Protein–RNA interactions for Protein: Q96PZ7

CSMD1, CUB and sushi domain-containing protein 1, humanhuman

Predictions only

Length 3,565 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1Q96PZ7 AC053481.3-201ENST00000577881 843 ntBASIC4.6□□□□□ -1.67
CSMD1Q96PZ7 MTRNR2L12-201ENST00000600213 1049 ntAPPRIS P1 BASIC4.6□□□□□ -1.67
CSMD1Q96PZ7 LINC02335-201ENST00000616578 659 ntTSL 3 BASIC4.6□□□□□ -1.67
CSMD1Q96PZ7 CD34-201ENST00000310833 8246 ntAPPRIS P2 TSL 1 (best) BASIC4.6□□□□□ -1.67
CSMD1Q96PZ7 FPGT-208ENST00000534056 1426 ntTSL 2 BASIC4.6□□□□□ -1.67
CSMD1Q96PZ7 AC016705.1-201ENST00000548231 1891 ntTSL 5 BASIC4.6□□□□□ -1.67
CSMD1Q96PZ7 AL080317.3-201ENST00000607434 4315 ntBASIC4.6□□□□□ -1.67
CSMD1Q96PZ7 AC093277.1-201ENST00000637776 1622 ntTSL 5 BASIC4.6□□□□□ -1.67
CSMD1Q96PZ7 PRDM10-202ENST00000358825 6322 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
CSMD1Q96PZ7 AL133419.1-201ENST00000423153 640 ntTSL 3 BASIC4.6□□□□□ -1.67
CSMD1Q96PZ7 RPL12P28-201ENST00000430852 489 ntBASIC4.6□□□□□ -1.67
CSMD1Q96PZ7 FTH1P10-202ENST00000430907 550 ntBASIC4.6□□□□□ -1.67
CSMD1Q96PZ7 IGKV2D-10-201ENST00000520194 281 ntBASIC4.6□□□□□ -1.67
CSMD1Q96PZ7 IGHV1-14-201ENST00000523391 241 ntBASIC4.6□□□□□ -1.67
CSMD1Q96PZ7 AC074031.1-201ENST00000550634 734 ntTSL 3 BASIC4.6□□□□□ -1.67
CSMD1Q96PZ7 MIR4737-201ENST00000583979 81 ntBASIC4.6□□□□□ -1.67
CSMD1Q96PZ7 PHACTR4-201ENST00000373836 3107 ntAPPRIS P4 TSL 5 BASIC4.6□□□□□ -1.67
CSMD1Q96PZ7 ZNF480-204ENST00000490272 2238 ntTSL 2 BASIC4.6□□□□□ -1.67
CSMD1Q96PZ7 DPP8-210ENST00000559233 2953 ntAPPRIS P4 TSL 2 BASIC4.6□□□□□ -1.67
CSMD1Q96PZ7 PLEKHA5-202ENST00000424268 4391 ntTSL 2 BASIC4.6□□□□□ -1.67
CSMD1Q96PZ7 PHLPP2-206ENST00000568954 8317 ntAPPRIS P2 TSL 1 (best) BASIC4.6□□□□□ -1.67
CSMD1Q96PZ7 MAPK10-366ENST00000641903 2812 ntAPPRIS ALT1 BASIC4.6□□□□□ -1.67
CSMD1Q96PZ7 ZNF227-201ENST00000313040 3043 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
CSMD1Q96PZ7 AL122126.1-201ENST00000546905 1318 ntBASIC4.6□□□□□ -1.67
CSMD1Q96PZ7 CNTNAP2-203ENST00000463592 6076 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
CSMD1Q96PZ7 AMOT-201ENST00000304758 6888 ntAPPRIS P3 TSL 1 (best) BASIC4.59□□□□□ -1.67
CSMD1Q96PZ7 ABCA9-202ENST00000453985 6116 ntTSL 5 BASIC4.59□□□□□ -1.67
CSMD1Q96PZ7 DIEXF-202ENST00000491415 8446 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
CSMD1Q96PZ7 PARP4P1-201ENST00000435945 2337 ntBASIC4.59□□□□□ -1.67
CSMD1Q96PZ7 AC019205.1-201ENST00000421830 730 ntBASIC4.59□□□□□ -1.67
CSMD1Q96PZ7 BBIP1-203ENST00000423273 492 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
CSMD1Q96PZ7 AGK-205ENST00000492693 1046 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
CSMD1Q96PZ7 LINC00992-202ENST00000514186 564 ntTSL 5 BASIC4.59□□□□□ -1.67
CSMD1Q96PZ7 MIR2117-201ENST00000516780 80 ntBASIC4.59□□□□□ -1.67
CSMD1Q96PZ7 AC005000.1-201ENST00000536192 288 ntBASIC4.59□□□□□ -1.67
CSMD1Q96PZ7 AC095055.1-201ENST00000603472 1113 ntBASIC4.59□□□□□ -1.67
CSMD1Q96PZ7 ITPR1-202ENST00000354582 10242 ntTSL 5 BASIC4.59□□□□□ -1.67
CSMD1Q96PZ7 DYNC1H1-201ENST00000360184 14333 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
CSMD1Q96PZ7 GRB10-207ENST00000402578 4760 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
CSMD1Q96PZ7 AC132825.3-201ENST00000562182 4710 ntBASIC4.59□□□□□ -1.67
CSMD1Q96PZ7 NEDD9-202ENST00000379446 4536 ntAPPRIS P3 TSL 1 (best) BASIC4.59□□□□□ -1.67
CSMD1Q96PZ7 ASNS-209ENST00000444334 1812 ntTSL 2 BASIC4.59□□□□□ -1.67
CSMD1Q96PZ7 CRYBG3-201ENST00000389622 10729 ntAPPRIS P1 TSL 5 BASIC4.59□□□□□ -1.67
CSMD1Q96PZ7 AP001043.1-202ENST00000380931 5027 ntTSL 2 BASIC4.59□□□□□ -1.67
CSMD1Q96PZ7 PUS3-203ENST00000530811 1792 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
CSMD1Q96PZ7 UBN2-201ENST00000473989 14444 ntAPPRIS P1 TSL 2 BASIC4.59□□□□□ -1.67
CSMD1Q96PZ7 NCR3LG1-201ENST00000338965 6438 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
CSMD1Q96PZ7 RPL5P25-201ENST00000441148 775 ntBASIC4.59□□□□□ -1.67
CSMD1Q96PZ7 AL161912.1-201ENST00000448475 524 ntTSL 3 BASIC4.59□□□□□ -1.67
CSMD1Q96PZ7 AC144548.2-201ENST00000550231 946 ntTSL 3 BASIC4.59□□□□□ -1.67
CSMD1Q96PZ7 MIR4715-201ENST00000584117 79 ntBASIC4.59□□□□□ -1.67
CSMD1Q96PZ7 AC003682.1-201ENST00000599190 462 ntTSL 2 BASIC4.59□□□□□ -1.67
CSMD1Q96PZ7 MIR99AHG-211ENST00000602323 475 ntTSL 5 BASIC4.59□□□□□ -1.67
CSMD1Q96PZ7 AC013731.1-201ENST00000604340 883 ntBASIC4.59□□□□□ -1.67
CSMD1Q96PZ7 AC015660.5-201ENST00000623238 564 ntBASIC4.59□□□□□ -1.67
CSMD1Q96PZ7 AC144833.1-201ENST00000567953 4089 ntBASIC4.59□□□□□ -1.67
CSMD1Q96PZ7 ARHGEF7-203ENST00000375723 4957 ntTSL 5 BASIC4.59□□□□□ -1.67
CSMD1Q96PZ7 CTNND1-230ENST00000532245 5655 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
CSMD1Q96PZ7 POMP-202ENST00000460403 1428 ntTSL 3 BASIC4.59□□□□□ -1.67
CSMD1Q96PZ7 ZNF484-204ENST00000395506 4031 ntTSL 3 BASIC4.59□□□□□ -1.67
CSMD1Q96PZ7 DNAH9-201ENST00000262442 13750 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.68
CSMD1Q96PZ7 LUZP1-203ENST00000418342 8421 ntAPPRIS P1 TSL 5 BASIC4.59□□□□□ -1.68
CSMD1Q96PZ7 LINC02523-201ENST00000423208 2963 ntTSL 1 (best) BASIC4.59□□□□□ -1.68
CSMD1Q96PZ7 ATXN3-203ENST00000393287 6770 ntTSL 1 (best) BASIC4.59□□□□□ -1.68
CSMD1Q96PZ7 LIN28B-201ENST00000345080 5505 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.68
CSMD1Q96PZ7 AL138831.1-201ENST00000415144 209 ntTSL 3 BASIC4.59□□□□□ -1.68
CSMD1Q96PZ7 AC093581.1-201ENST00000446411 461 ntTSL 2 BASIC4.59□□□□□ -1.68
CSMD1Q96PZ7 AC097484.1-201ENST00000471148 389 ntBASIC4.59□□□□□ -1.68
CSMD1Q96PZ7 LINC00518-204ENST00000491317 1228 ntTSL 2 BASIC4.59□□□□□ -1.68
CSMD1Q96PZ7 AC020704.1-201ENST00000559394 454 ntTSL 3 BASIC4.59□□□□□ -1.68
CSMD1Q96PZ7 MAPK10-206ENST00000395161 4186 ntTSL 5 BASIC4.59□□□□□ -1.68
CSMD1Q96PZ7 AL034549.2-201ENST00000618285 3373 ntBASIC4.59□□□□□ -1.68
CSMD1Q96PZ7 ARHGEF11-202ENST00000368194 6889 ntAPPRIS P4 TSL 1 (best) BASIC4.59□□□□□ -1.68
CSMD1Q96PZ7 AP000866.6-201ENST00000638898 3579 ntBASIC4.59□□□□□ -1.68
CSMD1Q96PZ7 KIAA0040-206ENST00000619513 4340 ntTSL 2 BASIC4.58□□□□□ -1.68
CSMD1Q96PZ7 SASH1-204ENST00000622663 5075 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
CSMD1Q96PZ7 GPR155-206ENST00000614352 7321 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
CSMD1Q96PZ7 MYO6-201ENST00000369975 5387 ntTSL 5 BASIC4.58□□□□□ -1.68
CSMD1Q96PZ7 AP004147.1-201ENST00000505153 6314 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
CSMD1Q96PZ7 C2CD3-202ENST00000334126 7960 ntAPPRIS ALT2 TSL 5 BASIC4.58□□□□□ -1.68
CSMD1Q96PZ7 OR4N5-201ENST00000333629 927 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
CSMD1Q96PZ7 RNASE9-201ENST00000338904 1049 ntAPPRIS P3 TSL 1 (best) BASIC4.58□□□□□ -1.68
CSMD1Q96PZ7 RNU4-2-201ENST00000365668 141 ntBASIC4.58□□□□□ -1.68
CSMD1Q96PZ7 C1orf105-203ENST00000367727 985 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
CSMD1Q96PZ7 RNU2-50P-201ENST00000410494 143 ntBASIC4.58□□□□□ -1.68
CSMD1Q96PZ7 AC015977.1-201ENST00000418887 292 ntBASIC4.58□□□□□ -1.68
CSMD1Q96PZ7 AC009480.2-201ENST00000422916 432 ntBASIC4.58□□□□□ -1.68
CSMD1Q96PZ7 POU6F2-AS1-201ENST00000433519 381 ntTSL 3 BASIC4.58□□□□□ -1.68
CSMD1Q96PZ7 AC109327.1-201ENST00000471666 403 ntBASIC4.58□□□□□ -1.68
CSMD1Q96PZ7 SAP18P1-201ENST00000512058 390 ntBASIC4.58□□□□□ -1.68
CSMD1Q96PZ7 RNASE9-204ENST00000553541 1136 ntAPPRIS P3 TSL 1 (best) BASIC4.58□□□□□ -1.68
CSMD1Q96PZ7 RNASE9-206ENST00000554964 1101 ntAPPRIS P3 TSL 1 (best) BASIC4.58□□□□□ -1.68
CSMD1Q96PZ7 RNASE9-208ENST00000556208 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC4.58□□□□□ -1.68
CSMD1Q96PZ7 RNASE9-210ENST00000557209 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC4.58□□□□□ -1.68
CSMD1Q96PZ7 AC073878.2-201ENST00000565449 385 ntTSL 3 BASIC4.58□□□□□ -1.68
CSMD1Q96PZ7 AC106730.2-201ENST00000566641 540 ntBASIC4.58□□□□□ -1.68
CSMD1Q96PZ7 AC073575.2-201ENST00000614212 627 ntBASIC4.58□□□□□ -1.68
CSMD1Q96PZ7 AL445647.2-201ENST00000615170 130 ntBASIC4.58□□□□□ -1.68
CSMD1Q96PZ7 AC104793.1-201ENST00000508189 2840 ntTSL 2 BASIC4.58□□□□□ -1.68
CSMD1Q96PZ7 CCT8P1-201ENST00000413611 1657 ntBASIC4.58□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 68.1 ms