Protein–RNA interactions for Protein: Q96PC3

AP1S3, AP-1 complex subunit sigma-3, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3Q96PC3 AC037450.1-201ENST00000518129 647 ntTSL 3 BASIC4.28□□□□□ -1.72
AP1S3Q96PC3 LRTOMT-217ENST00000539587 428 ntTSL 2 BASIC4.28□□□□□ -1.72
AP1S3Q96PC3 TDGP1-201ENST00000543961 1229 ntBASIC4.28□□□□□ -1.72
AP1S3Q96PC3 AC026401.1-201ENST00000549756 530 ntTSL 3 BASIC4.28□□□□□ -1.72
AP1S3Q96PC3 BICD1-206ENST00000551086 423 ntTSL 3 BASIC4.28□□□□□ -1.72
AP1S3Q96PC3 AC127381.1-201ENST00000555979 939 ntBASIC4.28□□□□□ -1.72
AP1S3Q96PC3 BMS1P16-201ENST00000556075 1147 ntBASIC4.28□□□□□ -1.72
AP1S3Q96PC3 AC009562.1-202ENST00000558755 565 ntTSL 4 BASIC4.28□□□□□ -1.72
AP1S3Q96PC3 AP003774.2-201ENST00000569737 558 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
AP1S3Q96PC3 MIR4732-201ENST00000581873 76 ntBASIC4.28□□□□□ -1.72
AP1S3Q96PC3 AC012593.1-208ENST00000587791 696 ntTSL 5 BASIC4.28□□□□□ -1.72
AP1S3Q96PC3 AC092067.1-201ENST00000592929 488 ntTSL 3 BASIC4.28□□□□□ -1.72
AP1S3Q96PC3 AC006262.3-201ENST00000597337 258 ntTSL 3 BASIC4.28□□□□□ -1.72
AP1S3Q96PC3 DARS-AS1-217ENST00000599279 544 ntTSL 5 BASIC4.28□□□□□ -1.72
AP1S3Q96PC3 AL645933.2-201ENST00000606743 1207 ntBASIC4.28□□□□□ -1.72
AP1S3Q96PC3 AC015712.7-201ENST00000615211 635 ntBASIC4.28□□□□□ -1.72
AP1S3Q96PC3 MIR6133-201ENST00000617057 108 ntBASIC4.28□□□□□ -1.72
AP1S3Q96PC3 SNHG5-214ENST00000623001 598 ntTSL 2 BASIC4.28□□□□□ -1.72
AP1S3Q96PC3 TTC33-206ENST00000636863 1149 ntTSL 5 BASIC4.28□□□□□ -1.72
AP1S3Q96PC3 AC087565.2-201ENST00000637695 952 ntTSL 5 BASIC4.28□□□□□ -1.72
AP1S3Q96PC3 ZNF189-201ENST00000259395 3115 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
AP1S3Q96PC3 AC217777.1-201ENST00000570034 1471 ntBASIC4.28□□□□□ -1.72
AP1S3Q96PC3 CDC27P2-201ENST00000425026 1922 ntBASIC4.28□□□□□ -1.72
AP1S3Q96PC3 AL390726.6-201ENST00000637760 1654 ntTSL 5 BASIC4.28□□□□□ -1.72
AP1S3Q96PC3 GYS2-201ENST00000261195 3132 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
AP1S3Q96PC3 OR8D1-202ENST00000641015 8286 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
AP1S3Q96PC3 OR8D1-203ENST00000641897 8285 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
AP1S3Q96PC3 OR55B1P-203ENST00000641518 2602 ntBASIC4.27□□□□□ -1.73
AP1S3Q96PC3 TRPC5OS-201ENST00000371970 2806 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
AP1S3Q96PC3 AP002004.1-203ENST00000531091 1768 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
AP1S3Q96PC3 FAM135A-202ENST00000361499 5042 ntAPPRIS ALT1 TSL 1 (best) BASIC4.27□□□□□ -1.73
AP1S3Q96PC3 EVI5-208ENST00000540033 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC4.27□□□□□ -1.73
AP1S3Q96PC3 RPL7-204ENST00000396467 1526 ntTSL 3 BASIC4.27□□□□□ -1.73
AP1S3Q96PC3 MYBPC1-209ENST00000547509 3749 ntAPPRIS ALT2 TSL 5 BASIC4.27□□□□□ -1.73
AP1S3Q96PC3 KYAT3-203ENST00000370491 1868 ntAPPRIS ALT1 TSL 2 BASIC4.27□□□□□ -1.73
AP1S3Q96PC3 SAMD13-203ENST00000370670 565 ntAPPRIS P1 TSL 4 BASIC4.27□□□□□ -1.73
AP1S3Q96PC3 DEC1-201ENST00000374016 1251 ntAPPRIS P2 TSL 1 (best) BASIC4.27□□□□□ -1.73
AP1S3Q96PC3 LYZL1-201ENST00000375500 815 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
AP1S3Q96PC3 UBTFL2-201ENST00000411859 1191 ntBASIC4.27□□□□□ -1.73
AP1S3Q96PC3 MTND2P12-201ENST00000417560 1252 ntBASIC4.27□□□□□ -1.73
AP1S3Q96PC3 AC018878.1-201ENST00000419904 433 ntTSL 3 BASIC4.27□□□□□ -1.73
AP1S3Q96PC3 AC006509.1-201ENST00000420788 634 ntBASIC4.27□□□□□ -1.73
AP1S3Q96PC3 CYP1B1-AS1-202ENST00000427168 484 ntTSL 4 BASIC4.27□□□□□ -1.73
AP1S3Q96PC3 PCBP1-AS1-224ENST00000429599 1045 ntTSL 5 BASIC4.27□□□□□ -1.73
AP1S3Q96PC3 AL162385.2-201ENST00000437864 285 ntTSL 3 BASIC4.27□□□□□ -1.73
AP1S3Q96PC3 AC012368.1-201ENST00000438115 552 ntTSL 3 BASIC4.27□□□□□ -1.73
AP1S3Q96PC3 SEPT14P12-201ENST00000442280 560 ntBASIC4.27□□□□□ -1.73
AP1S3Q96PC3 AC022387.1-201ENST00000444770 794 ntTSL 3 BASIC4.27□□□□□ -1.73
AP1S3Q96PC3 AL117382.2-201ENST00000455642 403 ntTSL 3 BASIC4.27□□□□□ -1.73
AP1S3Q96PC3 AC006539.1-201ENST00000481419 501 ntBASIC4.27□□□□□ -1.73
AP1S3Q96PC3 NPM1P29-201ENST00000483112 803 ntBASIC4.27□□□□□ -1.73
AP1S3Q96PC3 AC073648.3-201ENST00000504939 925 ntBASIC4.27□□□□□ -1.73
AP1S3Q96PC3 AP001961.1-201ENST00000515782 526 ntTSL 3 BASIC4.27□□□□□ -1.73
AP1S3Q96PC3 RNA5SP434-201ENST00000516647 121 ntBASIC4.27□□□□□ -1.73
AP1S3Q96PC3 AC008680.1-201ENST00000523398 283 ntTSL 3 BASIC4.27□□□□□ -1.73
AP1S3Q96PC3 AL133240.1-201ENST00000553537 580 ntTSL 4 BASIC4.27□□□□□ -1.73
AP1S3Q96PC3 AC018946.1-201ENST00000560578 458 ntTSL 5 BASIC4.27□□□□□ -1.73
AP1S3Q96PC3 AC100821.2-201ENST00000565668 440 ntTSL 2 BASIC4.27□□□□□ -1.73
AP1S3Q96PC3 PWRN1-207ENST00000565893 818 ntTSL 3 BASIC4.27□□□□□ -1.73
AP1S3Q96PC3 DCTN5-207ENST00000568272 523 ntTSL 2 BASIC4.27□□□□□ -1.73
AP1S3Q96PC3 U95743.1-201ENST00000573369 1001 ntTSL 5 BASIC4.27□□□□□ -1.73
AP1S3Q96PC3 MIR378H-201ENST00000579966 83 ntBASIC4.27□□□□□ -1.73
AP1S3Q96PC3 LINC00907-202ENST00000585639 915 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
AP1S3Q96PC3 CT45A1-201ENST00000594117 1087 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
AP1S3Q96PC3 LINC01435-212ENST00000601212 742 ntTSL 5 BASIC4.27□□□□□ -1.73
AP1S3Q96PC3 AC138035.1-202ENST00000604669 683 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
AP1S3Q96PC3 HIRAP1-201ENST00000605318 787 ntBASIC4.27□□□□□ -1.73
AP1S3Q96PC3 AC008280.3-201ENST00000606436 732 ntTSL 5 BASIC4.27□□□□□ -1.73
AP1S3Q96PC3 SSX9-202ENST00000608568 580 ntTSL 4 BASIC4.27□□□□□ -1.73
AP1S3Q96PC3 AC096861.1-201ENST00000616652 240 ntBASIC4.27□□□□□ -1.73
AP1S3Q96PC3 MYNN-203ENST00000544106 4815 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
AP1S3Q96PC3 AKAP6-212ENST00000557272 4601 ntTSL 5 BASIC4.27□□□□□ -1.73
AP1S3Q96PC3 SOS1-202ENST00000402219 8314 ntAPPRIS P2 TSL 1 (best) BASIC4.27□□□□□ -1.73
AP1S3Q96PC3 DMD-229ENST00000619831 13734 ntAPPRIS ALT2 TSL 5 BASIC4.27□□□□□ -1.73
AP1S3Q96PC3 DMD-230ENST00000620040 13746 ntAPPRIS ALT2 TSL 5 BASIC4.27□□□□□ -1.73
AP1S3Q96PC3 AC009962.1-201ENST00000567327 3813 ntBASIC4.27□□□□□ -1.73
AP1S3Q96PC3 TDRD5-202ENST00000367614 3632 ntAPPRIS P3 TSL 2 BASIC4.27□□□□□ -1.73
AP1S3Q96PC3 FNIP1-202ENST00000307968 6388 ntAPPRIS ALT2 TSL 5 BASIC4.27□□□□□ -1.73
AP1S3Q96PC3 FILIP1-201ENST00000237172 4580 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
AP1S3Q96PC3 MTCO1P28-201ENST00000574177 1528 ntBASIC4.26□□□□□ -1.73
AP1S3Q96PC3 UGP2-229ENST00000613823 1858 ntAPPRIS ALT1 TSL 5 BASIC4.26□□□□□ -1.73
AP1S3Q96PC3 HACD4-202ENST00000495827 8267 ntAPPRIS P1 TSL 2 BASIC4.26□□□□□ -1.73
AP1S3Q96PC3 MTUS1-203ENST00000381861 3996 ntAPPRIS P4 TSL 2 BASIC4.26□□□□□ -1.73
AP1S3Q96PC3 ODAM-201ENST00000396094 1319 ntAPPRIS P1 TSL 5 BASIC4.26□□□□□ -1.73
AP1S3Q96PC3 EIF3EP1-201ENST00000433978 1316 ntBASIC4.26□□□□□ -1.73
AP1S3Q96PC3 CDY11P-201ENST00000447168 1651 ntBASIC4.26□□□□□ -1.73
AP1S3Q96PC3 GNG2-212ENST00000556752 3424 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
AP1S3Q96PC3 ANKRD36B-202ENST00000359901 4297 ntAPPRIS P1 TSL 5 BASIC4.26□□□□□ -1.73
AP1S3Q96PC3 OR4N5-202ENST00000641086 2187 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
AP1S3Q96PC3 CCR2-201ENST00000292301 2671 ntTSL 5 BASIC4.26□□□□□ -1.73
AP1S3Q96PC3 ERCC6L-201ENST00000334463 4243 ntAPPRIS P2 TSL 1 (best) BASIC4.26□□□□□ -1.73
AP1S3Q96PC3 AMELX-201ENST00000348912 737 ntTSL 5 BASIC4.26□□□□□ -1.73
AP1S3Q96PC3 PSMD10-206ENST00000372296 878 ntTSL 5 BASIC4.26□□□□□ -1.73
AP1S3Q96PC3 PPARG-204ENST00000397000 1122 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
AP1S3Q96PC3 AL157702.1-201ENST00000398764 426 ntBASIC4.26□□□□□ -1.73
AP1S3Q96PC3 SNRPEP6-201ENST00000407465 277 ntBASIC4.26□□□□□ -1.73
AP1S3Q96PC3 CBX1P3-201ENST00000413296 527 ntBASIC4.26□□□□□ -1.73
AP1S3Q96PC3 HYALP1-201ENST00000417674 1279 ntBASIC4.26□□□□□ -1.73
AP1S3Q96PC3 AL139008.2-201ENST00000420315 395 ntTSL 3 BASIC4.26□□□□□ -1.73
AP1S3Q96PC3 AC104170.2-201ENST00000424246 678 ntTSL 3 BASIC4.26□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 76.1 ms