Protein–RNA interactions for Protein: Q96P16

RPRD1A, Regulation of nuclear pre-mRNA domain-containing protein 1A, humanhuman

Predicted RBP Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1AQ96P16 RLN1-201ENST00000223862 967 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
RPRD1AQ96P16 OR8A1-201ENST00000284287 1146 ntAPPRIS P1 BASIC5.95□□□□□ -1.46
RPRD1AQ96P16 ZNF224-201ENST00000336976 3980 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
RPRD1AQ96P16 RN7SKP78-201ENST00000364711 318 ntBASIC5.95□□□□□ -1.46
RPRD1AQ96P16 DYDC1-202ENST00000372204 750 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
RPRD1AQ96P16 PPCS-201ENST00000372556 984 ntTSL 2 BASIC5.95□□□□□ -1.46
RPRD1AQ96P16 STMN1-202ENST00000374291 867 ntAPPRIS P1 TSL 2 BASIC5.95□□□□□ -1.46
RPRD1AQ96P16 PRH2-201ENST00000381847 641 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
RPRD1AQ96P16 RNA5SP122-201ENST00000384457 108 ntBASIC5.95□□□□□ -1.46
RPRD1AQ96P16 IGLV4-3-201ENST00000390318 403 ntAPPRIS P1 BASIC5.95□□□□□ -1.46
RPRD1AQ96P16 HMGB1P20-201ENST00000402555 677 ntBASIC5.95□□□□□ -1.46
RPRD1AQ96P16 HIST1H3PS1-201ENST00000404612 417 ntBASIC5.95□□□□□ -1.46
RPRD1AQ96P16 LINC00308-201ENST00000419431 727 ntTSL 5 BASIC5.95□□□□□ -1.46
RPRD1AQ96P16 OR4K3-201ENST00000425829 947 ntAPPRIS P1 BASIC5.95□□□□□ -1.46
RPRD1AQ96P16 ATF2-212ENST00000426833 4132 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
RPRD1AQ96P16 LINC01798-204ENST00000433396 682 ntTSL 3 BASIC5.95□□□□□ -1.46
RPRD1AQ96P16 AL162385.2-201ENST00000437864 285 ntTSL 3 BASIC5.95□□□□□ -1.46
RPRD1AQ96P16 AC017074.2-201ENST00000439382 607 ntTSL 2 BASIC5.95□□□□□ -1.46
RPRD1AQ96P16 ITGA9-AS1-207ENST00000445429 532 ntTSL 5 BASIC5.95□□□□□ -1.46
RPRD1AQ96P16 RPL36AP39-201ENST00000445859 318 ntBASIC5.95□□□□□ -1.46
RPRD1AQ96P16 DCDC1-207ENST00000452803 1706 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
RPRD1AQ96P16 RPL32P33-201ENST00000487023 394 ntBASIC5.95□□□□□ -1.46
RPRD1AQ96P16 AC117386.2-203ENST00000489690 557 ntTSL 3 BASIC5.95□□□□□ -1.46
RPRD1AQ96P16 AC105384.2-201ENST00000508433 640 ntBASIC5.95□□□□□ -1.46
RPRD1AQ96P16 C5orf46-203ENST00000515291 573 ntAPPRIS ALT1 TSL 1 (best) BASIC5.95□□□□□ -1.46
RPRD1AQ96P16 snoU109.5-201ENST00000516231 132 ntBASIC5.95□□□□□ -1.46
RPRD1AQ96P16 AC139365.2-201ENST00000517972 253 ntBASIC5.95□□□□□ -1.46
RPRD1AQ96P16 AP003037.1-201ENST00000537594 267 ntTSL 5 BASIC5.95□□□□□ -1.46
RPRD1AQ96P16 AL121594.2-201ENST00000541658 472 ntBASIC5.95□□□□□ -1.46
RPRD1AQ96P16 LYRM1-211ENST00000569023 769 ntAPPRIS P1 TSL 3 BASIC5.95□□□□□ -1.46
RPRD1AQ96P16 AC103808.4-201ENST00000577258 391 ntTSL 3 BASIC5.95□□□□□ -1.46
RPRD1AQ96P16 AC090403.1-202ENST00000582108 833 ntTSL 3 BASIC5.95□□□□□ -1.46
RPRD1AQ96P16 AC127024.6-201ENST00000621598 424 ntBASIC5.95□□□□□ -1.46
RPRD1AQ96P16 UBA3-213ENST00000631029 123 ntTSL 5 BASIC5.95□□□□□ -1.46
RPRD1AQ96P16 CEP128-202ENST00000281129 4461 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
RPRD1AQ96P16 ZNF721-201ENST00000338977 4492 ntTSL 2 BASIC5.95□□□□□ -1.46
RPRD1AQ96P16 ZNF300P1-202ENST00000520773 3115 ntTSL 5 BASIC5.95□□□□□ -1.46
RPRD1AQ96P16 ABCC9-204ENST00000538350 2672 ntTSL 2 BASIC5.95□□□□□ -1.46
RPRD1AQ96P16 ADAM21-201ENST00000603540 2658 ntAPPRIS P1 TSL 3 BASIC5.95□□□□□ -1.46
RPRD1AQ96P16 TMEM161B-211ENST00000512429 1796 ntTSL 2 BASIC5.95□□□□□ -1.46
RPRD1AQ96P16 ZNF271P-205ENST00000639248 4573 ntTSL 5 BASIC5.95□□□□□ -1.46
RPRD1AQ96P16 NOSTRIN-201ENST00000317647 2294 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
RPRD1AQ96P16 KCNMA1-AS1-202ENST00000429850 3566 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
RPRD1AQ96P16 LINC02225-201ENST00000510444 4069 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
RPRD1AQ96P16 RNF19BPY-201ENST00000458209 1550 ntBASIC5.94□□□□□ -1.46
RPRD1AQ96P16 OR2A7-202ENST00000641841 2062 ntAPPRIS P1 BASIC5.94□□□□□ -1.46
RPRD1AQ96P16 MMRN1-201ENST00000264790 4967 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
RPRD1AQ96P16 MRPS36-201ENST00000256441 1286 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
RPRD1AQ96P16 TMSB4XP4-201ENST00000323496 618 ntBASIC5.94□□□□□ -1.46
RPRD1AQ96P16 SSX5-202ENST00000347757 1261 ntAPPRIS ALT2 TSL 5 BASIC5.94□□□□□ -1.46
RPRD1AQ96P16 RNA5SP394-201ENST00000364216 119 ntBASIC5.94□□□□□ -1.46
RPRD1AQ96P16 RNU6-673P-201ENST00000365084 104 ntBASIC5.94□□□□□ -1.46
RPRD1AQ96P16 GNG5P2-201ENST00000372054 207 ntBASIC5.94□□□□□ -1.46
RPRD1AQ96P16 PAGE2-202ENST00000374968 551 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
RPRD1AQ96P16 SSX5-203ENST00000376923 1208 ntAPPRIS ALT2 TSL 5 BASIC5.94□□□□□ -1.46
RPRD1AQ96P16 BTBD9-203ENST00000403056 1155 ntTSL 5 BASIC5.94□□□□□ -1.46
RPRD1AQ96P16 AL008723.2-201ENST00000426354 562 ntTSL 4 BASIC5.94□□□□□ -1.46
RPRD1AQ96P16 AL022331.1-201ENST00000429025 477 ntBASIC5.94□□□□□ -1.46
RPRD1AQ96P16 AC074011.1-201ENST00000431376 581 ntTSL 4 BASIC5.94□□□□□ -1.46
RPRD1AQ96P16 AC073410.1-201ENST00000435125 589 ntBASIC5.94□□□□□ -1.46
RPRD1AQ96P16 OR7E116P-201ENST00000448529 957 ntBASIC5.94□□□□□ -1.46
RPRD1AQ96P16 RPS23P6-201ENST00000466136 431 ntBASIC5.94□□□□□ -1.46
RPRD1AQ96P16 EFCAB10-203ENST00000480514 740 ntAPPRIS ALT1 TSL 1 (best) BASIC5.94□□□□□ -1.46
RPRD1AQ96P16 AC009120.1-201ENST00000493458 473 ntBASIC5.94□□□□□ -1.46
RPRD1AQ96P16 CRNDE-201ENST00000501177 614 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
RPRD1AQ96P16 AC106895.1-202ENST00000502956 777 ntTSL 3 BASIC5.94□□□□□ -1.46
RPRD1AQ96P16 CYCSP22-201ENST00000517555 339 ntBASIC5.94□□□□□ -1.46
RPRD1AQ96P16 AC021678.3-201ENST00000517893 476 ntBASIC5.94□□□□□ -1.46
RPRD1AQ96P16 AC112191.2-201ENST00000522428 333 ntBASIC5.94□□□□□ -1.46
RPRD1AQ96P16 HMGB1P42-201ENST00000532126 553 ntBASIC5.94□□□□□ -1.46
RPRD1AQ96P16 AL390816.1-201ENST00000553990 322 ntTSL 3 BASIC5.94□□□□□ -1.46
RPRD1AQ96P16 SLC7A7-210ENST00000554517 1158 ntTSL 5 BASIC5.94□□□□□ -1.46
RPRD1AQ96P16 LINC02345-203ENST00000558897 405 ntTSL 3 BASIC5.94□□□□□ -1.46
RPRD1AQ96P16 AC084757.2-201ENST00000559165 540 ntTSL 2 BASIC5.94□□□□□ -1.46
RPRD1AQ96P16 AC068722.1-202ENST00000559600 655 ntTSL 3 BASIC5.94□□□□□ -1.46
RPRD1AQ96P16 AC074050.3-201ENST00000569175 441 ntTSL 4 BASIC5.94□□□□□ -1.46
RPRD1AQ96P16 LINC01862-201ENST00000593792 478 ntTSL 2 BASIC5.94□□□□□ -1.46
RPRD1AQ96P16 AC006115.2-201ENST00000596823 202 ntBASIC5.94□□□□□ -1.46
RPRD1AQ96P16 AL357153.4-201ENST00000620487 1016 ntBASIC5.94□□□□□ -1.46
RPRD1AQ96P16 SNAP23-222ENST00000626061 237 ntTSL 5 BASIC5.94□□□□□ -1.46
RPRD1AQ96P16 SNAP23-223ENST00000627440 210 ntTSL 5 BASIC5.94□□□□□ -1.46
RPRD1AQ96P16 AC012564.1-201ENST00000636802 557 ntTSL 4 BASIC5.94□□□□□ -1.46
RPRD1AQ96P16 IGLV10-54-202ENST00000640991 351 ntTSL 5 BASIC5.94□□□□□ -1.46
RPRD1AQ96P16 ZNF484-201ENST00000332591 2836 ntTSL 2 BASIC5.94□□□□□ -1.46
RPRD1AQ96P16 SYNJ2BP-201ENST00000256366 7015 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
RPRD1AQ96P16 MSL3P1-202ENST00000440028 1468 ntBASIC5.94□□□□□ -1.46
RPRD1AQ96P16 NUF2-202ENST00000367900 1842 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
RPRD1AQ96P16 HHLA2-211ENST00000619531 2548 ntAPPRIS P3 TSL 5 BASIC5.94□□□□□ -1.46
RPRD1AQ96P16 NLRP8-201ENST00000291971 3934 ntAPPRIS P3 TSL 1 (best) BASIC5.94□□□□□ -1.46
RPRD1AQ96P16 LINC01677-205ENST00000635636 2362 ntTSL 5 BASIC5.94□□□□□ -1.46
RPRD1AQ96P16 ZNF195-201ENST00000005082 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC5.94□□□□□ -1.46
RPRD1AQ96P16 CTAGE5-204ENST00000341749 2912 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
RPRD1AQ96P16 LRRC49-201ENST00000260382 2784 ntAPPRIS P3 TSL 1 (best) BASIC5.94□□□□□ -1.46
RPRD1AQ96P16 AC123769.1-201ENST00000530992 3192 ntBASIC5.94□□□□□ -1.46
RPRD1AQ96P16 OPRM1-217ENST00000522236 2459 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
RPRD1AQ96P16 MFSD8-239ENST00000641590 2479 ntBASIC5.93□□□□□ -1.46
RPRD1AQ96P16 ALMS1-IT1-201ENST00000441587 2107 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
RPRD1AQ96P16 EPC2-201ENST00000258484 3649 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
RPRD1AQ96P16 TMEM133-201ENST00000303130 1953 ntAPPRIS P1 BASIC5.93□□□□□ -1.46
RPRD1AQ96P16 EXD1-201ENST00000314992 2942 ntAPPRIS P3 TSL 1 (best) BASIC5.93□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 187.7 ms