Protein–RNA interactions for Protein: Q96M95

CCDC42, Coiled-coil domain-containing protein 42, humanhuman

Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC42Q96M95 OR5AM1P-201ENST00000532136 1032 ntBASIC6.05□□□□□ -1.44
CCDC42Q96M95 RERGL-203ENST00000538724 973 ntAPPRIS P1 TSL 2 BASIC6.05□□□□□ -1.44
CCDC42Q96M95 AC121758.1-202ENST00000556917 658 ntBASIC6.05□□□□□ -1.44
CCDC42Q96M95 AC136944.1-201ENST00000567464 560 ntTSL 5 BASIC6.05□□□□□ -1.44
CCDC42Q96M95 CASC22-201ENST00000569713 386 ntTSL 5 BASIC6.05□□□□□ -1.44
CCDC42Q96M95 AC087501.3-201ENST00000576477 513 ntTSL 5 BASIC6.05□□□□□ -1.44
CCDC42Q96M95 AC243756.1-201ENST00000584068 660 ntAPPRIS P1 BASIC6.05□□□□□ -1.44
CCDC42Q96M95 MIR7853-201ENST00000584820 132 ntBASIC6.05□□□□□ -1.44
CCDC42Q96M95 AC011500.1-201ENST00000601963 469 ntBASIC6.05□□□□□ -1.44
CCDC42Q96M95 PCDH15-215ENST00000409834 5401 ntTSL 5 BASIC6.05□□□□□ -1.44
CCDC42Q96M95 CD164-207ENST00000504373 1402 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
CCDC42Q96M95 C11orf1-203ENST00000529270 1437 ntTSL 2 BASIC6.05□□□□□ -1.44
CCDC42Q96M95 LINC01847-202ENST00000523311 1762 ntTSL 5 BASIC6.05□□□□□ -1.44
CCDC42Q96M95 KCNT2-203ENST00000451324 3146 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
CCDC42Q96M95 BNIP2-202ENST00000415213 1509 ntTSL 2 BASIC6.04□□□□□ -1.44
CCDC42Q96M95 FCRL2-203ENST00000368181 1669 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
CCDC42Q96M95 AP001157.1-201ENST00000550837 2339 ntBASIC6.04□□□□□ -1.44
CCDC42Q96M95 GPHN-204ENST00000543237 2459 ntTSL 2 BASIC6.04□□□□□ -1.44
CCDC42Q96M95 KIAA0408-204ENST00000483725 3284 ntAPPRIS P2 TSL 5 BASIC6.04□□□□□ -1.44
CCDC42Q96M95 RNF32-203ENST00000392741 2260 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
CCDC42Q96M95 PALMD-203ENST00000605497 1942 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
CCDC42Q96M95 PRTG-201ENST00000389286 11967 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
CCDC42Q96M95 RLN1-201ENST00000223862 967 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
CCDC42Q96M95 SCGB3A2-201ENST00000296694 515 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
CCDC42Q96M95 OR4S2-201ENST00000312422 936 ntAPPRIS P1 BASIC6.04□□□□□ -1.44
CCDC42Q96M95 OR11H6-201ENST00000315519 993 ntAPPRIS P1 BASIC6.04□□□□□ -1.44
CCDC42Q96M95 AL159987.1-201ENST00000347911 293 ntBASIC6.04□□□□□ -1.44
CCDC42Q96M95 BX284632.2-201ENST00000421091 399 ntBASIC6.04□□□□□ -1.44
CCDC42Q96M95 RPL7P56-201ENST00000429441 717 ntBASIC6.04□□□□□ -1.44
CCDC42Q96M95 AL512605.1-202ENST00000441919 381 ntBASIC6.04□□□□□ -1.44
CCDC42Q96M95 AL138921.1-201ENST00000444359 846 ntTSL 5 BASIC6.04□□□□□ -1.44
CCDC42Q96M95 AL359955.2-201ENST00000445380 353 ntBASIC6.04□□□□□ -1.44
CCDC42Q96M95 AL596266.1-201ENST00000448132 400 ntBASIC6.04□□□□□ -1.44
CCDC42Q96M95 AL450263.1-202ENST00000453199 643 ntTSL 3 BASIC6.04□□□□□ -1.44
CCDC42Q96M95 CBX1P2-201ENST00000453841 458 ntBASIC6.04□□□□□ -1.44
CCDC42Q96M95 AC023194.2-201ENST00000465398 406 ntBASIC6.04□□□□□ -1.44
CCDC42Q96M95 RPL32P33-201ENST00000487023 394 ntBASIC6.04□□□□□ -1.44
CCDC42Q96M95 RN7SL568P-201ENST00000493069 298 ntBASIC6.04□□□□□ -1.44
CCDC42Q96M95 SCGB3A2-202ENST00000504320 440 ntTSL 3 BASIC6.04□□□□□ -1.44
CCDC42Q96M95 GLRX-203ENST00000505427 632 ntAPPRIS P1 TSL 2 BASIC6.04□□□□□ -1.44
CCDC42Q96M95 AC091874.2-201ENST00000505889 720 ntBASIC6.04□□□□□ -1.44
CCDC42Q96M95 AC116634.1-201ENST00000506926 447 ntTSL 5 BASIC6.04□□□□□ -1.44
CCDC42Q96M95 AC117383.1-201ENST00000507698 422 ntTSL 3 BASIC6.04□□□□□ -1.44
CCDC42Q96M95 ZFPM2-AS1-201ENST00000509144 542 ntTSL 3 BASIC6.04□□□□□ -1.44
CCDC42Q96M95 MRPS5P3-201ENST00000515577 166 ntBASIC6.04□□□□□ -1.44
CCDC42Q96M95 SCARNA6.1-201ENST00000516989 238 ntBASIC6.04□□□□□ -1.44
CCDC42Q96M95 RAB30-209ENST00000532548 644 ntTSL 3 BASIC6.04□□□□□ -1.44
CCDC42Q96M95 AC007956.1-201ENST00000555623 542 ntBASIC6.04□□□□□ -1.44
CCDC42Q96M95 MIR4502-201ENST00000580432 81 ntBASIC6.04□□□□□ -1.44
CCDC42Q96M95 SEPT4-AS1-202ENST00000580589 653 ntTSL 3 BASIC6.04□□□□□ -1.44
CCDC42Q96M95 SNHG8-202ENST00000602483 309 ntTSL 3 BASIC6.04□□□□□ -1.44
CCDC42Q96M95 FAM27E4-201ENST00000605259 342 ntBASIC6.04□□□□□ -1.44
CCDC42Q96M95 AC005828.7-201ENST00000607331 556 ntBASIC6.04□□□□□ -1.44
CCDC42Q96M95 SGO1-AS1-206ENST00000635369 442 ntTSL 5 BASIC6.04□□□□□ -1.44
CCDC42Q96M95 ZNF253-205ENST00000640599 1208 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
CCDC42Q96M95 MCF2L2-202ENST00000414362 3031 ntTSL 2 BASIC6.04□□□□□ -1.44
CCDC42Q96M95 LRRC8B-201ENST00000330947 7593 ntAPPRIS P1 TSL 5 BASIC6.04□□□□□ -1.44
CCDC42Q96M95 WDR12-201ENST00000261015 8100 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
CCDC42Q96M95 NPIPB9-201ENST00000357796 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC6.04□□□□□ -1.44
CCDC42Q96M95 ZNF677-201ENST00000333952 3422 ntAPPRIS P1 TSL 2 BASIC6.04□□□□□ -1.44
CCDC42Q96M95 ACADSB-201ENST00000358776 5859 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
CCDC42Q96M95 AL359715.3-201ENST00000569267 2123 ntBASIC6.04□□□□□ -1.44
CCDC42Q96M95 PTPRD-205ENST00000397611 8242 ntTSL 5 BASIC6.03□□□□□ -1.44
CCDC42Q96M95 PTPRD-213ENST00000537002 8224 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
CCDC42Q96M95 SDR42E1-201ENST00000328945 11566 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
CCDC42Q96M95 MIA3-203ENST00000344922 8142 ntAPPRIS P2 TSL 5 BASIC6.03□□□□□ -1.44
CCDC42Q96M95 PIGN-241ENST00000640050 3154 ntAPPRIS P1 TSL 5 BASIC6.03□□□□□ -1.44
CCDC42Q96M95 AC005005.4-201ENST00000623789 16698 ntBASIC6.03□□□□□ -1.44
CCDC42Q96M95 ZNF567-203ENST00000585696 3734 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
CCDC42Q96M95 GTDC1-212ENST00000463875 1563 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
CCDC42Q96M95 BBOX1-202ENST00000525090 1596 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
CCDC42Q96M95 RN7SKP184-201ENST00000362348 333 ntBASIC6.03□□□□□ -1.44
CCDC42Q96M95 PAGE2-202ENST00000374968 551 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
CCDC42Q96M95 PPP1R7-203ENST00000401987 820 ntTSL 3 BASIC6.03□□□□□ -1.44
CCDC42Q96M95 RPS6P23-201ENST00000413224 722 ntBASIC6.03□□□□□ -1.44
CCDC42Q96M95 AL359885.1-201ENST00000415786 903 ntBASIC6.03□□□□□ -1.44
CCDC42Q96M95 SPATA13-AS1-201ENST00000430733 433 ntTSL 3 BASIC6.03□□□□□ -1.44
CCDC42Q96M95 RPL5P25-201ENST00000441148 775 ntBASIC6.03□□□□□ -1.44
CCDC42Q96M95 BCAP29-207ENST00000445771 1157 ntTSL 5 BASIC6.03□□□□□ -1.44
CCDC42Q96M95 MOB4-207ENST00000448447 1021 ntTSL 2 BASIC6.03□□□□□ -1.44
CCDC42Q96M95 MIS18A-AS1-201ENST00000453549 769 ntTSL 5 BASIC6.03□□□□□ -1.44
CCDC42Q96M95 RN7SL193P-201ENST00000491708 276 ntBASIC6.03□□□□□ -1.44
CCDC42Q96M95 AC009120.1-201ENST00000493458 473 ntBASIC6.03□□□□□ -1.44
CCDC42Q96M95 AC092916.1-201ENST00000497896 411 ntTSL 3 BASIC6.03□□□□□ -1.44
CCDC42Q96M95 CSNK1A1P3-201ENST00000504105 330 ntBASIC6.03□□□□□ -1.44
CCDC42Q96M95 AC097110.1-201ENST00000507344 768 ntTSL 2 BASIC6.03□□□□□ -1.44
CCDC42Q96M95 AC010451.1-201ENST00000509057 556 ntTSL 3 BASIC6.03□□□□□ -1.44
CCDC42Q96M95 MOCS2-206ENST00000510818 1251 ntTSL 5 BASIC6.03□□□□□ -1.44
CCDC42Q96M95 AC022441.2-201ENST00000514113 382 ntTSL 3 BASIC6.03□□□□□ -1.44
CCDC42Q96M95 IGLV3-24-201ENST00000517477 197 ntBASIC6.03□□□□□ -1.44
CCDC42Q96M95 AC009884.1-201ENST00000522670 545 ntTSL 4 BASIC6.03□□□□□ -1.44
CCDC42Q96M95 AP001267.3-204ENST00000528578 423 ntTSL 3 BASIC6.03□□□□□ -1.44
CCDC42Q96M95 HMGN2P36-201ENST00000529541 409 ntBASIC6.03□□□□□ -1.44
CCDC42Q96M95 AP004609.2-201ENST00000532177 190 ntBASIC6.03□□□□□ -1.44
CCDC42Q96M95 GPRC5D-AS1-205ENST00000540198 404 ntTSL 5 BASIC6.03□□□□□ -1.44
CCDC42Q96M95 AL133371.1-201ENST00000555481 764 ntTSL 2 BASIC6.03□□□□□ -1.44
CCDC42Q96M95 AL162464.1-201ENST00000557642 554 ntTSL 5 BASIC6.03□□□□□ -1.44
CCDC42Q96M95 LINC01477-201ENST00000566101 1226 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
CCDC42Q96M95 MIR4311-201ENST00000580794 100 ntBASIC6.03□□□□□ -1.44
CCDC42Q96M95 PPIAL4F-202ENST00000581138 660 ntAPPRIS P1 BASIC6.03□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 85.8 ms