Protein–RNA interactions for Protein: Q96JG6

VPS50, Syndetin, humanhuman

Predictions only

Length 964 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50Q96JG6 SNORD115-48-201ENST00000364764 76 ntBASIC6.08□□□□□ -1.44
VPS50Q96JG6 PRPS1-202ENST00000372419 628 ntTSL 2 BASIC6.08□□□□□ -1.44
VPS50Q96JG6 CD52-201ENST00000374213 468 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
VPS50Q96JG6 AC117402.1-202ENST00000383686 820 ntTSL 2 BASIC6.08□□□□□ -1.44
VPS50Q96JG6 C9orf147-201ENST00000412934 584 ntTSL 3 BASIC6.08□□□□□ -1.44
VPS50Q96JG6 AC097717.1-233ENST00000413557 460 ntTSL 3 BASIC6.08□□□□□ -1.44
VPS50Q96JG6 AF064860.1-201ENST00000416555 544 ntTSL 3 BASIC6.08□□□□□ -1.44
VPS50Q96JG6 VN1R31P-201ENST00000417498 730 ntBASIC6.08□□□□□ -1.44
VPS50Q96JG6 ICA1L-206ENST00000418208 602 ntTSL 4 BASIC6.08□□□□□ -1.44
VPS50Q96JG6 MARK2P12-201ENST00000420129 585 ntBASIC6.08□□□□□ -1.44
VPS50Q96JG6 AC000095.2-201ENST00000424407 768 ntTSL 2 BASIC6.08□□□□□ -1.44
VPS50Q96JG6 VN1R20P-201ENST00000425215 966 ntBASIC6.08□□□□□ -1.44
VPS50Q96JG6 LINC01473-202ENST00000427108 695 ntTSL 5 BASIC6.08□□□□□ -1.44
VPS50Q96JG6 VTI1BP4-201ENST00000427516 527 ntBASIC6.08□□□□□ -1.44
VPS50Q96JG6 MED28P4-201ENST00000433137 572 ntBASIC6.08□□□□□ -1.44
VPS50Q96JG6 AL390879.1-201ENST00000439143 386 ntBASIC6.08□□□□□ -1.44
VPS50Q96JG6 AC007000.2-201ENST00000442564 487 ntBASIC6.08□□□□□ -1.44
VPS50Q96JG6 OR2L9P-201ENST00000444456 913 ntBASIC6.08□□□□□ -1.44
VPS50Q96JG6 LINC01828-201ENST00000445514 531 ntTSL 4 BASIC6.08□□□□□ -1.44
VPS50Q96JG6 AC025947.1-201ENST00000447943 299 ntTSL 5 BASIC6.08□□□□□ -1.44
VPS50Q96JG6 RPL31P20-201ENST00000449593 360 ntBASIC6.08□□□□□ -1.44
VPS50Q96JG6 AC005304.1-201ENST00000457609 405 ntTSL 3 BASIC6.08□□□□□ -1.44
VPS50Q96JG6 AC078785.2-201ENST00000462010 1253 ntTSL 3 BASIC6.08□□□□□ -1.44
VPS50Q96JG6 MTCO2P9-201ENST00000503214 694 ntBASIC6.08□□□□□ -1.44
VPS50Q96JG6 HMGN1P16-201ENST00000508308 283 ntBASIC6.08□□□□□ -1.44
VPS50Q96JG6 FABP5P6-201ENST00000510588 409 ntBASIC6.08□□□□□ -1.44
VPS50Q96JG6 APOBEC3AP1-201ENST00000511396 287 ntBASIC6.08□□□□□ -1.44
VPS50Q96JG6 AC011853.1-201ENST00000518911 454 ntBASIC6.08□□□□□ -1.44
VPS50Q96JG6 TNFRSF17-201ENST00000053243 994 ntAPPRIS P2 TSL 1 (best) BASIC6.08□□□□□ -1.44
VPS50Q96JG6 CCDC7-207ENST00000535327 700 ntAPPRIS ALT2 TSL 1 (best) BASIC6.08□□□□□ -1.44
VPS50Q96JG6 AC020611.2-201ENST00000535594 671 ntTSL 3 BASIC6.08□□□□□ -1.44
VPS50Q96JG6 CCDC7-208ENST00000537047 657 ntAPPRIS ALT2 TSL 1 (best) BASIC6.08□□□□□ -1.44
VPS50Q96JG6 LINC02420-201ENST00000543387 741 ntTSL 5 BASIC6.08□□□□□ -1.44
VPS50Q96JG6 ATF7IP2-206ENST00000543967 998 ntTSL 2 BASIC6.08□□□□□ -1.44
VPS50Q96JG6 OLR1-210ENST00000544577 924 ntTSL 5 BASIC6.08□□□□□ -1.44
VPS50Q96JG6 TMEM106C-215ENST00000550552 776 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
VPS50Q96JG6 AC009396.1-201ENST00000553628 1079 ntTSL 2 BASIC6.08□□□□□ -1.44
VPS50Q96JG6 LINC02325-202ENST00000554260 567 ntTSL 4 BASIC6.08□□□□□ -1.44
VPS50Q96JG6 AC013652.2-202ENST00000558948 910 ntTSL 3 BASIC6.08□□□□□ -1.44
VPS50Q96JG6 OR4H6P-201ENST00000563771 921 ntBASIC6.08□□□□□ -1.44
VPS50Q96JG6 AL078601.3-201ENST00000573303 535 ntBASIC6.08□□□□□ -1.44
VPS50Q96JG6 RPL26-204ENST00000578812 1002 ntTSL 2 BASIC6.08□□□□□ -1.44
VPS50Q96JG6 LINC01966-201ENST00000595809 821 ntTSL 5 BASIC6.08□□□□□ -1.44
VPS50Q96JG6 AC002069.2-201ENST00000603580 883 ntBASIC6.08□□□□□ -1.44
VPS50Q96JG6 AL158050.2-201ENST00000605336 568 ntBASIC6.08□□□□□ -1.44
VPS50Q96JG6 AL050303.3-201ENST00000613704 284 ntBASIC6.08□□□□□ -1.44
VPS50Q96JG6 AP001264.1-201ENST00000620602 703 ntBASIC6.08□□□□□ -1.44
VPS50Q96JG6 AC010608.3-201ENST00000625048 527 ntBASIC6.08□□□□□ -1.44
VPS50Q96JG6 AC004160.1-201ENST00000625468 929 ntTSL 5 BASIC6.08□□□□□ -1.44
VPS50Q96JG6 AC000095.2-202ENST00000637415 154 ntBASIC6.08□□□□□ -1.44
VPS50Q96JG6 ZNF735-201ENST00000429565 1570 ntAPPRIS P1 TSL 5 BASIC6.08□□□□□ -1.44
VPS50Q96JG6 SELENOI-205ENST00000613142 8126 ntAPPRIS ALT1 TSL 5 BASIC6.08□□□□□ -1.44
VPS50Q96JG6 RIMS2-209ENST00000507740 8002 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
VPS50Q96JG6 TMOD2-201ENST00000249700 9191 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
VPS50Q96JG6 SLC38A9-218ENST00000512595 1756 ntTSL 2 BASIC6.08□□□□□ -1.44
VPS50Q96JG6 FHL1-218ENST00000543669 2878 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
VPS50Q96JG6 PSG6-204ENST00000402603 1412 ntTSL 5 BASIC6.08□□□□□ -1.44
VPS50Q96JG6 AC010894.3-202ENST00000412835 1405 ntTSL 2 BASIC6.08□□□□□ -1.44
VPS50Q96JG6 RMDN2-202ENST00000354545 1381 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
VPS50Q96JG6 CHMP1B2P-202ENST00000614414 6813 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
VPS50Q96JG6 LINC01568-202ENST00000555721 1325 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
VPS50Q96JG6 RPL31P11-201ENST00000426558 1558 ntBASIC6.07□□□□□ -1.44
VPS50Q96JG6 NBPF26-201ENST00000609741 3671 ntTSL 5 BASIC6.07□□□□□ -1.44
VPS50Q96JG6 GBP3-202ENST00000370481 3067 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
VPS50Q96JG6 RAD17-220ENST00000616683 3057 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
VPS50Q96JG6 FAM216B-202ENST00000537894 3300 ntAPPRIS P1 TSL 4 BASIC6.07□□□□□ -1.44
VPS50Q96JG6 STATH-201ENST00000246895 598 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
VPS50Q96JG6 SPATA9-201ENST00000274432 1100 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
VPS50Q96JG6 DPH5-201ENST00000342173 1143 ntAPPRIS ALT1 TSL 1 (best) BASIC6.07□□□□□ -1.44
VPS50Q96JG6 RNU6-650P-201ENST00000365658 111 ntBASIC6.07□□□□□ -1.44
VPS50Q96JG6 MYO3A-202ENST00000376301 727 ntTSL 5 BASIC6.07□□□□□ -1.44
VPS50Q96JG6 ADPRM-201ENST00000379774 1209 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
VPS50Q96JG6 PRB3-201ENST00000381842 1091 ntAPPRIS ALT2 TSL 5 BASIC6.07□□□□□ -1.44
VPS50Q96JG6 MIR188-201ENST00000385034 86 ntBASIC6.07□□□□□ -1.44
VPS50Q96JG6 RPL5P20-201ENST00000403848 896 ntBASIC6.07□□□□□ -1.44
VPS50Q96JG6 RN7SKP17-201ENST00000411242 351 ntBASIC6.07□□□□□ -1.44
VPS50Q96JG6 AL391863.2-201ENST00000411838 681 ntTSL 2 BASIC6.07□□□□□ -1.44
VPS50Q96JG6 AC017048.1-201ENST00000412153 495 ntTSL 2 BASIC6.07□□□□□ -1.44
VPS50Q96JG6 AC098592.2-201ENST00000413158 265 ntBASIC6.07□□□□□ -1.44
VPS50Q96JG6 AC011752.1-203ENST00000417609 582 ntTSL 2 BASIC6.07□□□□□ -1.44
VPS50Q96JG6 RPL21P50-201ENST00000417698 477 ntBASIC6.07□□□□□ -1.44
VPS50Q96JG6 AL590432.1-201ENST00000420071 566 ntTSL 2 BASIC6.07□□□□□ -1.44
VPS50Q96JG6 RPL23AP85-201ENST00000421838 433 ntBASIC6.07□□□□□ -1.44
VPS50Q96JG6 AL121885.3-201ENST00000422833 115 ntTSL 3 BASIC6.07□□□□□ -1.44
VPS50Q96JG6 CYCSP52-201ENST00000422857 310 ntBASIC6.07□□□□□ -1.44
VPS50Q96JG6 AL161793.1-201ENST00000435021 445 ntTSL 3 BASIC6.07□□□□□ -1.44
VPS50Q96JG6 AC009948.1-206ENST00000436616 1020 ntTSL 3 BASIC6.07□□□□□ -1.44
VPS50Q96JG6 AL133329.1-201ENST00000437466 478 ntTSL 3 BASIC6.07□□□□□ -1.44
VPS50Q96JG6 MTND6P5-201ENST00000448266 512 ntBASIC6.07□□□□□ -1.44
VPS50Q96JG6 CLIC4P1-201ENST00000453177 535 ntBASIC6.07□□□□□ -1.44
VPS50Q96JG6 SNX18P26-201ENST00000458433 740 ntBASIC6.07□□□□□ -1.44
VPS50Q96JG6 CABYRP1-201ENST00000465493 1045 ntBASIC6.07□□□□□ -1.44
VPS50Q96JG6 AC021006.1-201ENST00000489849 553 ntBASIC6.07□□□□□ -1.44
VPS50Q96JG6 AC078785.1-205ENST00000491578 482 ntTSL 4 BASIC6.07□□□□□ -1.44
VPS50Q96JG6 AC112484.3-201ENST00000505910 329 ntBASIC6.07□□□□□ -1.44
VPS50Q96JG6 RNA5SP473-201ENST00000516402 125 ntBASIC6.07□□□□□ -1.44
VPS50Q96JG6 AC018607.1-201ENST00000518552 673 ntTSL 5 BASIC6.07□□□□□ -1.44
VPS50Q96JG6 AP003469.1-202ENST00000521884 478 ntTSL 2 BASIC6.07□□□□□ -1.44
VPS50Q96JG6 KCTD21-AS1-203ENST00000527321 586 ntTSL 3 BASIC6.07□□□□□ -1.44
VPS50Q96JG6 RGS5-208ENST00000530507 851 ntAPPRIS ALT1 TSL 3 BASIC6.07□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 89.1 ms