Protein–RNA interactions for Protein: Q8TER0

SNED1, Sushi, nidogen and EGF-like domain-containing protein 1, humanhuman

Predictions only

Length 1,413 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1Q8TER0 AC124854.1-201ENST00000512210 511 ntTSL 3 BASIC6.82□□□□□ -1.32
SNED1Q8TER0 AL121594.2-201ENST00000541658 472 ntBASIC6.82□□□□□ -1.32
SNED1Q8TER0 LINC02412-201ENST00000552584 1269 ntTSL 5 BASIC6.82□□□□□ -1.32
SNED1Q8TER0 AC091544.7-201ENST00000554000 240 ntTSL 3 BASIC6.82□□□□□ -1.32
SNED1Q8TER0 AC127381.1-201ENST00000555979 939 ntBASIC6.82□□□□□ -1.32
SNED1Q8TER0 DPPA3P2-202ENST00000557188 1219 ntBASIC6.82□□□□□ -1.32
SNED1Q8TER0 LINC01904-201ENST00000564872 861 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
SNED1Q8TER0 AC012181.3-201ENST00000565861 601 ntTSL 4 BASIC6.82□□□□□ -1.32
SNED1Q8TER0 AC007448.2-201ENST00000583452 380 ntTSL 3 BASIC6.82□□□□□ -1.32
SNED1Q8TER0 AC069307.1-201ENST00000602820 447 ntBASIC6.82□□□□□ -1.32
SNED1Q8TER0 uc_338.18-201ENST00000615451 175 ntBASIC6.82□□□□□ -1.32
SNED1Q8TER0 ZNF254-207ENST00000613065 4244 ntTSL 3 BASIC6.82□□□□□ -1.32
SNED1Q8TER0 TMTC2-204ENST00000549919 6211 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
SNED1Q8TER0 MTUS1-202ENST00000297488 3731 ntAPPRIS ALT1 TSL 1 (best) BASIC6.82□□□□□ -1.32
SNED1Q8TER0 UQCC1-208ENST00000397554 3638 ntTSL 2 BASIC6.82□□□□□ -1.32
SNED1Q8TER0 CTNND1-236ENST00000533667 4990 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
SNED1Q8TER0 ABL2-201ENST00000344730 6910 ntAPPRIS ALT2 TSL 1 (best) BASIC6.81□□□□□ -1.32
SNED1Q8TER0 SLC17A2-203ENST00000377850 2524 ntAPPRIS ALT2 TSL 5 BASIC6.81□□□□□ -1.32
SNED1Q8TER0 ENTPD1-AS1-202ENST00000416301 4241 ntTSL 2 BASIC6.81□□□□□ -1.32
SNED1Q8TER0 TNFSF4-201ENST00000281834 3470 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
SNED1Q8TER0 KIAA0391-209ENST00000604948 1706 ntAPPRIS ALT2 TSL 2 BASIC6.81□□□□□ -1.32
SNED1Q8TER0 BRWD1-203ENST00000342449 12929 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
SNED1Q8TER0 PPP1R2P3-201ENST00000522232 1991 ntAPPRIS P1 BASIC6.81□□□□□ -1.32
SNED1Q8TER0 MTM1-203ENST00000370396 3593 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
SNED1Q8TER0 AC011493.1-201ENST00000596753 1632 ntBASIC6.81□□□□□ -1.32
SNED1Q8TER0 ZBTB25-204ENST00000608382 10372 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
SNED1Q8TER0 SMIM21-203ENST00000584508 2554 ntAPPRIS ALT2 TSL 1 (best) BASIC6.81□□□□□ -1.32
SNED1Q8TER0 DLG2-203ENST00000376104 5139 ntAPPRIS P3 TSL 1 (best) BASIC6.81□□□□□ -1.32
SNED1Q8TER0 HIST1H2BD-201ENST00000289316 789 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
SNED1Q8TER0 HNMT-203ENST00000329366 835 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
SNED1Q8TER0 SPANXN1-201ENST00000370493 1276 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
SNED1Q8TER0 RNA5SP87-201ENST00000384155 118 ntBASIC6.81□□□□□ -1.32
SNED1Q8TER0 AC109462.1-201ENST00000491087 368 ntBASIC6.81□□□□□ -1.32
SNED1Q8TER0 AC105233.1-201ENST00000498840 781 ntBASIC6.81□□□□□ -1.32
SNED1Q8TER0 LYRM4-208ENST00000500576 592 ntTSL 2 BASIC6.81□□□□□ -1.32
SNED1Q8TER0 AC040914.1-201ENST00000518674 318 ntTSL 3 BASIC6.81□□□□□ -1.32
SNED1Q8TER0 AC013644.1-202ENST00000523166 499 ntTSL 2 BASIC6.81□□□□□ -1.32
SNED1Q8TER0 AC139697.1-201ENST00000548429 745 ntBASIC6.81□□□□□ -1.32
SNED1Q8TER0 AC073569.1-201ENST00000548469 667 ntTSL 2 BASIC6.81□□□□□ -1.32
SNED1Q8TER0 AC078820.1-201ENST00000548702 742 ntTSL 3 BASIC6.81□□□□□ -1.32
SNED1Q8TER0 ANKRD20A5P-203ENST00000580200 566 ntTSL 5 BASIC6.81□□□□□ -1.32
SNED1Q8TER0 AP005242.1-201ENST00000583946 467 ntTSL 3 BASIC6.81□□□□□ -1.32
SNED1Q8TER0 AC024563.1-201ENST00000601860 618 ntTSL 2 BASIC6.81□□□□□ -1.32
SNED1Q8TER0 AC104785.1-201ENST00000603220 588 ntBASIC6.81□□□□□ -1.32
SNED1Q8TER0 AC087783.2-201ENST00000605070 562 ntBASIC6.81□□□□□ -1.32
SNED1Q8TER0 AC100827.5-201ENST00000615883 426 ntBASIC6.81□□□□□ -1.32
SNED1Q8TER0 WWOX-217ENST00000620008 450 ntTSL 2 BASIC6.81□□□□□ -1.32
SNED1Q8TER0 AL596275.2-208ENST00000641192 594 ntBASIC6.81□□□□□ -1.32
SNED1Q8TER0 MTRNR2L3-201ENST00000543500 1539 ntAPPRIS P1 BASIC6.81□□□□□ -1.32
SNED1Q8TER0 IKZF3-210ENST00000377958 1837 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
SNED1Q8TER0 KLHL13-202ENST00000371876 5331 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
SNED1Q8TER0 DICER1-201ENST00000343455 10277 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
SNED1Q8TER0 FGF1-216ENST00000621536 4062 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
SNED1Q8TER0 ZNF208-201ENST00000397126 3992 ntAPPRIS P1 TSL 3 BASIC6.8□□□□□ -1.32
SNED1Q8TER0 TDRD5-202ENST00000367614 3632 ntAPPRIS P3 TSL 2 BASIC6.8□□□□□ -1.32
SNED1Q8TER0 LINC01958-201ENST00000637749 1941 ntTSL 5 BASIC6.8□□□□□ -1.32
SNED1Q8TER0 PWAR1-201ENST00000624188 2414 ntBASIC6.8□□□□□ -1.32
SNED1Q8TER0 LINC00282-202ENST00000627246 4008 ntAPPRIS P5 TSL 2 BASIC6.8□□□□□ -1.32
SNED1Q8TER0 INPP4B-214ENST00000508116 3165 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
SNED1Q8TER0 CDYL2-207ENST00000570137 8159 ntAPPRIS P2 TSL 1 (best) BASIC6.8□□□□□ -1.32
SNED1Q8TER0 LINC00702-203ENST00000608792 6300 ntTSL 4 BASIC6.8□□□□□ -1.32
SNED1Q8TER0 WDR63-202ENST00000326813 2888 ntAPPRIS ALT2 TSL 2 BASIC6.8□□□□□ -1.32
SNED1Q8TER0 RABGEF1-202ENST00000380828 3864 ntTSL 2 BASIC6.8□□□□□ -1.32
SNED1Q8TER0 DAZ2-203ENST00000382424 3853 ntAPPRIS ALT2 TSL 5 BASIC6.8□□□□□ -1.32
SNED1Q8TER0 TRBV24-1-201ENST00000390397 381 ntAPPRIS P1 BASIC6.8□□□□□ -1.32
SNED1Q8TER0 FAR2P2-201ENST00000413041 594 ntBASIC6.8□□□□□ -1.32
SNED1Q8TER0 BX470102.1-201ENST00000420695 531 ntTSL 2 BASIC6.8□□□□□ -1.32
SNED1Q8TER0 FAR2P4-202ENST00000425399 584 ntBASIC6.8□□□□□ -1.32
SNED1Q8TER0 AC019117.1-204ENST00000451792 442 ntTSL 3 BASIC6.8□□□□□ -1.32
SNED1Q8TER0 CYP4F62P-203ENST00000455215 552 ntTSL 4 BASIC6.8□□□□□ -1.32
SNED1Q8TER0 RPS29P22-201ENST00000472363 168 ntBASIC6.8□□□□□ -1.32
SNED1Q8TER0 TRBV5-2-201ENST00000489095 273 ntBASIC6.8□□□□□ -1.32
SNED1Q8TER0 AC008517.1-201ENST00000502383 585 ntTSL 4 BASIC6.8□□□□□ -1.32
SNED1Q8TER0 LINC02224-201ENST00000505706 584 ntTSL 4 BASIC6.8□□□□□ -1.32
SNED1Q8TER0 TOMM22P4-201ENST00000511318 336 ntBASIC6.8□□□□□ -1.32
SNED1Q8TER0 AC010230.1-201ENST00000514115 443 ntTSL 3 BASIC6.8□□□□□ -1.32
SNED1Q8TER0 AC009623.1-201ENST00000517964 1131 ntTSL 2 BASIC6.8□□□□□ -1.32
SNED1Q8TER0 AC013701.1-201ENST00000522657 465 ntBASIC6.8□□□□□ -1.32
SNED1Q8TER0 OR7G1-201ENST00000541538 936 ntAPPRIS P1 BASIC6.8□□□□□ -1.32
SNED1Q8TER0 AC066613.1-201ENST00000559977 1053 ntTSL 2 BASIC6.8□□□□□ -1.32
SNED1Q8TER0 AC104938.1-202ENST00000563041 630 ntTSL 3 BASIC6.8□□□□□ -1.32
SNED1Q8TER0 AC024592.1-202ENST00000590441 341 ntTSL 3 BASIC6.8□□□□□ -1.32
SNED1Q8TER0 MIR4435-2HG-220ENST00000609902 603 ntTSL 3 BASIC6.8□□□□□ -1.32
SNED1Q8TER0 OR5D13-201ENST00000623930 945 ntAPPRIS P1 BASIC6.8□□□□□ -1.32
SNED1Q8TER0 MVP-219ENST00000629059 120 ntTSL 5 BASIC6.8□□□□□ -1.32
SNED1Q8TER0 UBA3-213ENST00000631029 123 ntTSL 5 BASIC6.8□□□□□ -1.32
SNED1Q8TER0 DUXB-201ENST00000633875 1079 ntAPPRIS P1 TSL 3 BASIC6.8□□□□□ -1.32
SNED1Q8TER0 AP000550.3-201ENST00000637734 379 ntBASIC6.8□□□□□ -1.32
SNED1Q8TER0 ARID5B-201ENST00000279873 7891 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
SNED1Q8TER0 FYB1-204ENST00000505428 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC6.8□□□□□ -1.32
SNED1Q8TER0 MEF2C-210ENST00000506554 3469 ntTSL 5 BASIC6.8□□□□□ -1.32
SNED1Q8TER0 OR52I2-203ENST00000641896 6591 ntAPPRIS ALT2 BASIC6.8□□□□□ -1.32
SNED1Q8TER0 SLC39A12-201ENST00000377369 2808 ntAPPRIS ALT1 TSL 1 (best) BASIC6.8□□□□□ -1.32
SNED1Q8TER0 FBXL13-208ENST00000456695 1605 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
SNED1Q8TER0 DNAH10-210ENST00000638045 13678 ntAPPRIS P2 TSL 5 BASIC6.79□□□□□ -1.32
SNED1Q8TER0 AC019080.1-201ENST00000397057 5202 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
SNED1Q8TER0 ZNF733P-202ENST00000444809 1573 ntBASIC6.79□□□□□ -1.32
SNED1Q8TER0 CASC19-243ENST00000641588 1546 ntBASIC6.79□□□□□ -1.32
SNED1Q8TER0 CLEC4D-201ENST00000299665 1936 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
SNED1Q8TER0 DDX6-208ENST00000620157 6152 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
Retrieved 100 of 98,524 protein–RNA pairs in 92.6 ms