Protein–RNA interactions for Protein: Q8NHS4

CLHC1, Clathrin heavy chain linker domain-containing protein 1, humanhuman

Predictions only

Length 586 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLHC1Q8NHS4 OR4S2-201ENST00000312422 936 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
CLHC1Q8NHS4 TSLP-201ENST00000344895 736 ntAPPRIS P2 TSL 1 (best) BASIC5.5□□□□□ -1.53
CLHC1Q8NHS4 AC117402.1-202ENST00000383686 820 ntTSL 2 BASIC5.5□□□□□ -1.53
CLHC1Q8NHS4 EI24P3-201ENST00000399046 1062 ntBASIC5.5□□□□□ -1.53
CLHC1Q8NHS4 RN7SKP29-201ENST00000410957 272 ntBASIC5.5□□□□□ -1.53
CLHC1Q8NHS4 RN7SKP279-201ENST00000411383 298 ntBASIC5.5□□□□□ -1.53
CLHC1Q8NHS4 AC008073.2-201ENST00000428344 792 ntTSL 5 BASIC5.5□□□□□ -1.53
CLHC1Q8NHS4 AC092168.2-201ENST00000430586 717 ntTSL 3 BASIC5.5□□□□□ -1.53
CLHC1Q8NHS4 AL160004.1-201ENST00000434311 478 ntTSL 3 BASIC5.5□□□□□ -1.53
CLHC1Q8NHS4 AC099670.2-201ENST00000435130 321 ntBASIC5.5□□□□□ -1.53
CLHC1Q8NHS4 AC007327.2-201ENST00000440788 457 ntTSL 3 BASIC5.5□□□□□ -1.53
CLHC1Q8NHS4 CASP5-205ENST00000444749 1237 ntAPPRIS P1 TSL 2 BASIC5.5□□□□□ -1.53
CLHC1Q8NHS4 EEF1B2P3-201ENST00000447718 678 ntBASIC5.5□□□□□ -1.53
CLHC1Q8NHS4 OR7E116P-201ENST00000448529 957 ntBASIC5.5□□□□□ -1.53
CLHC1Q8NHS4 AC008443.2-201ENST00000499096 566 ntTSL 2 BASIC5.5□□□□□ -1.53
CLHC1Q8NHS4 AC008413.2-201ENST00000507398 342 ntTSL 3 BASIC5.5□□□□□ -1.53
CLHC1Q8NHS4 PRMT5P1-201ENST00000514351 598 ntBASIC5.5□□□□□ -1.53
CLHC1Q8NHS4 AC111000.6-201ENST00000514471 709 ntBASIC5.5□□□□□ -1.53
CLHC1Q8NHS4 CETN3-206ENST00000522864 738 ntTSL 3 BASIC5.5□□□□□ -1.53
CLHC1Q8NHS4 IGHVIII-76-1-201ENST00000523776 286 ntBASIC5.5□□□□□ -1.53
CLHC1Q8NHS4 OR8Q1P-201ENST00000526467 655 ntBASIC5.5□□□□□ -1.53
CLHC1Q8NHS4 CASP5-209ENST00000531367 879 ntTSL 5 BASIC5.5□□□□□ -1.53
CLHC1Q8NHS4 AC091078.2-201ENST00000557145 559 ntBASIC5.5□□□□□ -1.53
CLHC1Q8NHS4 AC010325.1-202ENST00000562076 279 ntAPPRIS ALT2 TSL 1 (best) BASIC5.5□□□□□ -1.53
CLHC1Q8NHS4 MIR3154-201ENST00000577829 84 ntBASIC5.5□□□□□ -1.53
CLHC1Q8NHS4 AC005244.1-201ENST00000582566 339 ntBASIC5.5□□□□□ -1.53
CLHC1Q8NHS4 AC108673.3-201ENST00000609183 335 ntBASIC5.5□□□□□ -1.53
CLHC1Q8NHS4 RNA5SP439-201ENST00000617595 124 ntBASIC5.5□□□□□ -1.53
CLHC1Q8NHS4 AC244100.4-201ENST00000617747 388 ntBASIC5.5□□□□□ -1.53
CLHC1Q8NHS4 ZNF260-204ENST00000592282 5055 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
CLHC1Q8NHS4 PCGF5-201ENST00000336126 7018 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
CLHC1Q8NHS4 PPBPP2-201ENST00000513150 1362 ntBASIC5.5□□□□□ -1.53
CLHC1Q8NHS4 IKZF2-207ENST00000434687 3888 ntAPPRIS P2 TSL 5 BASIC5.5□□□□□ -1.53
CLHC1Q8NHS4 RAPGEF4-215ENST00000540783 3974 ntTSL 2 BASIC5.5□□□□□ -1.53
CLHC1Q8NHS4 ITGB1-201ENST00000302278 3640 ntAPPRIS P2 TSL 1 (best) BASIC5.5□□□□□ -1.53
CLHC1Q8NHS4 CLSPN-202ENST00000318121 4169 ntAPPRIS P3 TSL 1 (best) BASIC5.5□□□□□ -1.53
CLHC1Q8NHS4 SLC26A5-208ENST00000393730 2498 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
CLHC1Q8NHS4 AC019072.1-201ENST00000604535 1551 ntBASIC5.5□□□□□ -1.53
CLHC1Q8NHS4 AL162726.3-201ENST00000637606 1301 ntTSL 5 BASIC5.49□□□□□ -1.53
CLHC1Q8NHS4 GPR87-201ENST00000260843 1608 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
CLHC1Q8NHS4 SCN2A-203ENST00000375437 8792 ntAPPRIS ALT1 TSL 5 BASIC5.49□□□□□ -1.53
CLHC1Q8NHS4 FAS-203ENST00000355279 983 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
CLHC1Q8NHS4 PTPN20-208ENST00000395727 790 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
CLHC1Q8NHS4 AC016739.1-201ENST00000405359 345 ntBASIC5.49□□□□□ -1.53
CLHC1Q8NHS4 MIR1275-201ENST00000408770 80 ntBASIC5.49□□□□□ -1.53
CLHC1Q8NHS4 OR2A25-201ENST00000408898 1014 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
CLHC1Q8NHS4 KCNJ13-202ENST00000409779 1099 ntTSL 2 BASIC5.49□□□□□ -1.53
CLHC1Q8NHS4 RNU2-18P-201ENST00000411224 162 ntBASIC5.49□□□□□ -1.53
CLHC1Q8NHS4 AC017048.1-201ENST00000412153 495 ntTSL 2 BASIC5.49□□□□□ -1.53
CLHC1Q8NHS4 AL357752.1-201ENST00000412817 349 ntBASIC5.49□□□□□ -1.53
CLHC1Q8NHS4 AC002511.2-201ENST00000413796 450 ntTSL 2 BASIC5.49□□□□□ -1.53
CLHC1Q8NHS4 AC078883.1-203ENST00000416080 654 ntTSL 3 BASIC5.49□□□□□ -1.53
CLHC1Q8NHS4 NAP1L4P3-201ENST00000432820 1147 ntBASIC5.49□□□□□ -1.53
CLHC1Q8NHS4 USP12-AS1-201ENST00000440657 268 ntTSL 5 BASIC5.49□□□□□ -1.53
CLHC1Q8NHS4 MEMO1P4-201ENST00000453590 386 ntBASIC5.49□□□□□ -1.53
CLHC1Q8NHS4 CST12P-201ENST00000457644 362 ntBASIC5.49□□□□□ -1.53
CLHC1Q8NHS4 RABGAP1L-216ENST00000486220 772 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
CLHC1Q8NHS4 RN7SL57P-201ENST00000493687 290 ntBASIC5.49□□□□□ -1.53
CLHC1Q8NHS4 AC091874.2-201ENST00000505889 720 ntBASIC5.49□□□□□ -1.53
CLHC1Q8NHS4 LDHAP1-201ENST00000509421 992 ntBASIC5.49□□□□□ -1.53
CLHC1Q8NHS4 NSMCE2-202ENST00000517315 996 ntTSL 3 BASIC5.49□□□□□ -1.53
CLHC1Q8NHS4 AP003031.2-204ENST00000527219 567 ntTSL 4 BASIC5.49□□□□□ -1.53
CLHC1Q8NHS4 MED21-206ENST00000546323 575 ntTSL 3 BASIC5.49□□□□□ -1.53
CLHC1Q8NHS4 AC078864.1-201ENST00000547538 512 ntTSL 4 BASIC5.49□□□□□ -1.53
CLHC1Q8NHS4 AL133371.1-201ENST00000555481 764 ntTSL 2 BASIC5.49□□□□□ -1.53
CLHC1Q8NHS4 AC006530.1-201ENST00000555980 571 ntBASIC5.49□□□□□ -1.53
CLHC1Q8NHS4 AC027130.1-201ENST00000564490 686 ntTSL 2 BASIC5.49□□□□□ -1.53
CLHC1Q8NHS4 AC002519.2-203ENST00000567043 837 ntBASIC5.49□□□□□ -1.53
CLHC1Q8NHS4 AL353804.2-201ENST00000603360 347 ntTSL 5 BASIC5.49□□□□□ -1.53
CLHC1Q8NHS4 LINC00506-201ENST00000628435 525 ntTSL 4 BASIC5.49□□□□□ -1.53
CLHC1Q8NHS4 C17orf78-203ENST00000611038 1675 ntAPPRIS ALT2 TSL 2 BASIC5.49□□□□□ -1.53
CLHC1Q8NHS4 OR52A5-201ENST00000307388 3973 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
CLHC1Q8NHS4 OR52A5-202ENST00000642125 3993 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
CLHC1Q8NHS4 AC093909.5-201ENST00000621839 1799 ntBASIC5.49□□□□□ -1.53
CLHC1Q8NHS4 GABRG1-201ENST00000295452 6785 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
CLHC1Q8NHS4 PLS3-201ENST00000289290 2277 ntTSL 2 BASIC5.49□□□□□ -1.53
CLHC1Q8NHS4 DDAH1-204ENST00000535924 3909 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
CLHC1Q8NHS4 ATF2-201ENST00000264110 4176 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
CLHC1Q8NHS4 AL360270.2-201ENST00000562952 5985 ntBASIC5.48□□□□□ -1.53
CLHC1Q8NHS4 TRAPPC6B-201ENST00000330149 3242 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
CLHC1Q8NHS4 NCOA1-206ENST00000407230 4745 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
CLHC1Q8NHS4 ZNF891-201ENST00000537226 15455 ntAPPRIS P1 TSL 2 BASIC5.48□□□□□ -1.53
CLHC1Q8NHS4 RABL3-201ENST00000273375 3883 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
CLHC1Q8NHS4 GPATCH11-201ENST00000281932 3570 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
CLHC1Q8NHS4 PPP2R5E-202ENST00000422769 3478 ntTSL 2 BASIC5.48□□□□□ -1.53
CLHC1Q8NHS4 AC025428.2-201ENST00000435367 2672 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
CLHC1Q8NHS4 AC068870.1-201ENST00000563737 2455 ntBASIC5.48□□□□□ -1.53
CLHC1Q8NHS4 EMC2-201ENST00000220853 1243 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
CLHC1Q8NHS4 CLC-201ENST00000221804 635 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
CLHC1Q8NHS4 SCGB3A2-201ENST00000296694 515 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
CLHC1Q8NHS4 METTL5-202ENST00000308099 629 ntTSL 3 BASIC5.48□□□□□ -1.53
CLHC1Q8NHS4 TMSB4XP2-201ENST00000335179 210 ntBASIC5.48□□□□□ -1.53
CLHC1Q8NHS4 SPINK14-201ENST00000356972 294 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
CLHC1Q8NHS4 WFDC8-202ENST00000357199 1268 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
CLHC1Q8NHS4 RNA5SP453-201ENST00000362503 119 ntBASIC5.48□□□□□ -1.53
CLHC1Q8NHS4 RNA5SP326-201ENST00000363209 110 ntBASIC5.48□□□□□ -1.53
CLHC1Q8NHS4 MIR130A-201ENST00000385274 89 ntBASIC5.48□□□□□ -1.53
CLHC1Q8NHS4 AC096921.1-201ENST00000411661 375 ntBASIC5.48□□□□□ -1.53
CLHC1Q8NHS4 AP000221.1-201ENST00000419694 1046 ntTSL 3 BASIC5.48□□□□□ -1.53
CLHC1Q8NHS4 PLA2G12AP2-201ENST00000424744 264 ntBASIC5.48□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 114.2 ms