Protein–RNA interactions for Protein: Q6P161

MRPL54, 39S ribosomal protein L54, mitochondrial, humanhuman

Known RBP Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL54Q6P161 AL451049.1-201ENST00000608672 497 ntBASIC4.2□□□□□ -1.74
MRPL54Q6P161 SLC8A1-AS1-218ENST00000610721 956 ntTSL 5 BASIC4.2□□□□□ -1.74
MRPL54Q6P161 AL021918.2-201ENST00000613415 194 ntBASIC4.2□□□□□ -1.74
MRPL54Q6P161 Metazoa_SRP.66-201ENST00000615609 282 ntBASIC4.2□□□□□ -1.74
MRPL54Q6P161 MIR6811-201ENST00000620409 58 ntBASIC4.2□□□□□ -1.74
MRPL54Q6P161 AC005972.4-201ENST00000636248 1131 ntTSL 5 BASIC4.2□□□□□ -1.74
MRPL54Q6P161 ATP13A3-211ENST00000619199 5227 ntTSL 2 BASIC4.2□□□□□ -1.74
MRPL54Q6P161 AC027088.4-201ENST00000611559 1947 ntBASIC4.2□□□□□ -1.74
MRPL54Q6P161 AC021074.3-201ENST00000476385 1825 ntTSL 2 BASIC4.2□□□□□ -1.74
MRPL54Q6P161 ATF7IP-209ENST00000536444 8774 ntAPPRIS ALT2 TSL 1 (best) BASIC4.2□□□□□ -1.74
MRPL54Q6P161 DROSHA-212ENST00000511367 5305 ntAPPRIS P4 TSL 1 (best) BASIC4.2□□□□□ -1.74
MRPL54Q6P161 LYARP1-201ENST00000436977 1501 ntBASIC4.2□□□□□ -1.74
MRPL54Q6P161 FOXP2-209ENST00000393498 2617 ntTSL 5 BASIC4.2□□□□□ -1.74
MRPL54Q6P161 FOXP2-202ENST00000360232 1412 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
MRPL54Q6P161 SCN1A-218ENST00000640036 8131 ntAPPRIS ALT1 TSL 5 BASIC4.19□□□□□ -1.74
MRPL54Q6P161 GRIK2-201ENST00000318991 4317 ntTSL 5 BASIC4.19□□□□□ -1.74
MRPL54Q6P161 TC2N-202ENST00000360594 3751 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
MRPL54Q6P161 SEC31A-217ENST00000505984 3596 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
MRPL54Q6P161 AC092821.1-204ENST00000518709 3552 ntTSL 5 BASIC4.19□□□□□ -1.74
MRPL54Q6P161 EMC2-201ENST00000220853 1243 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
MRPL54Q6P161 CRYBA1-201ENST00000225387 783 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
MRPL54Q6P161 OR1L4-201ENST00000259466 936 ntAPPRIS P1 BASIC4.19□□□□□ -1.74
MRPL54Q6P161 SNORA55-201ENST00000364587 135 ntBASIC4.19□□□□□ -1.74
MRPL54Q6P161 PAGE2-201ENST00000374965 456 ntTSL 2 BASIC4.19□□□□□ -1.74
MRPL54Q6P161 PAGE2-202ENST00000374968 551 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
MRPL54Q6P161 MIR130A-201ENST00000385274 89 ntBASIC4.19□□□□□ -1.74
MRPL54Q6P161 Z68694.1-201ENST00000413929 841 ntBASIC4.19□□□□□ -1.74
MRPL54Q6P161 MICG-208ENST00000416822 132 ntBASIC4.19□□□□□ -1.74
MRPL54Q6P161 AL672212.1-201ENST00000422246 400 ntBASIC4.19□□□□□ -1.74
MRPL54Q6P161 AC114498.1-201ENST00000423796 607 ntTSL 5 BASIC4.19□□□□□ -1.74
MRPL54Q6P161 LINC00894-203ENST00000432696 298 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
MRPL54Q6P161 RPL19P16-201ENST00000433839 588 ntBASIC4.19□□□□□ -1.74
MRPL54Q6P161 BMS1P10-201ENST00000443754 1120 ntBASIC4.19□□□□□ -1.74
MRPL54Q6P161 AL049649.1-201ENST00000444792 1105 ntTSL 5 BASIC4.19□□□□□ -1.74
MRPL54Q6P161 AC234771.2-201ENST00000445718 597 ntBASIC4.19□□□□□ -1.74
MRPL54Q6P161 AC019186.1-201ENST00000447019 545 ntTSL 3 BASIC4.19□□□□□ -1.74
MRPL54Q6P161 ATP5J2-205ENST00000449683 460 ntTSL 3 BASIC4.19□□□□□ -1.74
MRPL54Q6P161 AL591623.2-201ENST00000449978 222 ntBASIC4.19□□□□□ -1.74
MRPL54Q6P161 AF305872.1-201ENST00000485217 471 ntBASIC4.19□□□□□ -1.74
MRPL54Q6P161 AC104779.1-201ENST00000503557 441 ntTSL 3 BASIC4.19□□□□□ -1.74
MRPL54Q6P161 AC106760.2-201ENST00000504159 619 ntBASIC4.19□□□□□ -1.74
MRPL54Q6P161 LINC01339-201ENST00000505712 440 ntTSL 2 BASIC4.19□□□□□ -1.74
MRPL54Q6P161 AC010260.1-201ENST00000511484 664 ntTSL 3 BASIC4.19□□□□□ -1.74
MRPL54Q6P161 AC114940.1-201ENST00000512162 1265 ntBASIC4.19□□□□□ -1.74
MRPL54Q6P161 ODF1-202ENST00000518835 368 ntTSL 3 BASIC4.19□□□□□ -1.74
MRPL54Q6P161 RBPMS-207ENST00000519647 780 ntTSL 5 BASIC4.19□□□□□ -1.74
MRPL54Q6P161 TPT1-AS1-213ENST00000521336 759 ntTSL 5 BASIC4.19□□□□□ -1.74
MRPL54Q6P161 CYCSP25-201ENST00000525280 316 ntBASIC4.19□□□□□ -1.74
MRPL54Q6P161 AP003119.2-201ENST00000528075 336 ntTSL 3 BASIC4.19□□□□□ -1.74
MRPL54Q6P161 AC130364.2-201ENST00000528639 604 ntBASIC4.19□□□□□ -1.74
MRPL54Q6P161 HNF1A-AS1-203ENST00000537361 659 ntTSL 3 BASIC4.19□□□□□ -1.74
MRPL54Q6P161 AC079600.3-201ENST00000547898 447 ntTSL 5 BASIC4.19□□□□□ -1.74
MRPL54Q6P161 LINC01579-205ENST00000556447 791 ntTSL 4 BASIC4.19□□□□□ -1.74
MRPL54Q6P161 AC015660.3-201ENST00000559569 198 ntTSL 3 BASIC4.19□□□□□ -1.74
MRPL54Q6P161 MTCYBP13-201ENST00000578634 1093 ntBASIC4.19□□□□□ -1.74
MRPL54Q6P161 AC129510.2-201ENST00000582774 345 ntTSL 5 BASIC4.19□□□□□ -1.74
MRPL54Q6P161 AC026898.1-201ENST00000586404 571 ntBASIC4.19□□□□□ -1.74
MRPL54Q6P161 AC108738.1-201ENST00000603703 237 ntBASIC4.19□□□□□ -1.74
MRPL54Q6P161 MIR4435-2HG-219ENST00000609220 883 ntTSL 3 BASIC4.19□□□□□ -1.74
MRPL54Q6P161 AC009283.1-201ENST00000615852 645 ntBASIC4.19□□□□□ -1.74
MRPL54Q6P161 MALAT1-209ENST00000616691 587 ntTSL 2 BASIC4.19□□□□□ -1.74
MRPL54Q6P161 RFPL4AP6-201ENST00000616792 846 ntBASIC4.19□□□□□ -1.74
MRPL54Q6P161 AL357562.1-201ENST00000624911 609 ntBASIC4.19□□□□□ -1.74
MRPL54Q6P161 TMEM55A-206ENST00000630164 171 ntTSL 5 BASIC4.19□□□□□ -1.74
MRPL54Q6P161 TTC33-206ENST00000636863 1149 ntTSL 5 BASIC4.19□□□□□ -1.74
MRPL54Q6P161 AL357060.1-201ENST00000638039 977 ntTSL 5 BASIC4.19□□□□□ -1.74
MRPL54Q6P161 OR11H2-202ENST00000641517 1085 ntBASIC4.19□□□□□ -1.74
MRPL54Q6P161 ATP8B4-211ENST00000559829 4894 ntAPPRIS P1 TSL 5 BASIC4.19□□□□□ -1.74
MRPL54Q6P161 PATE4-201ENST00000457514 1983 ntAPPRIS P2 TSL 2 BASIC4.19□□□□□ -1.74
MRPL54Q6P161 CMYA5-201ENST00000446378 12847 ntAPPRIS P1 TSL 5 BASIC4.19□□□□□ -1.74
MRPL54Q6P161 ARHGAP24-201ENST00000264343 4572 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
MRPL54Q6P161 FAM135A-210ENST00000505868 5173 ntTSL 5 BASIC4.19□□□□□ -1.74
MRPL54Q6P161 ADH4-207ENST00000505590 1400 ntTSL 5 BASIC4.19□□□□□ -1.74
MRPL54Q6P161 ZFPM2-203ENST00000517361 3300 ntTSL 2 BASIC4.19□□□□□ -1.74
MRPL54Q6P161 ALCAM-205ENST00000472644 4189 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
MRPL54Q6P161 C2orf66-201ENST00000342506 1669 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
MRPL54Q6P161 ZNF445-201ENST00000396077 18299 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
MRPL54Q6P161 WDR35-202ENST00000345530 6960 ntAPPRIS ALT1 TSL 1 (best) BASIC4.19□□□□□ -1.74
MRPL54Q6P161 AC022417.1-201ENST00000624768 1303 ntBASIC4.19□□□□□ -1.74
MRPL54Q6P161 ZNF418-205ENST00000595830 3543 ntAPPRIS P3 TSL 1 (best) BASIC4.18□□□□□ -1.74
MRPL54Q6P161 ERP27-201ENST00000266397 2096 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
MRPL54Q6P161 CLDND1-208ENST00000503004 2818 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
MRPL54Q6P161 AC090518.1-201ENST00000562300 1495 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
MRPL54Q6P161 RASSF8-201ENST00000282884 1994 ntAPPRIS P1 TSL 2 BASIC4.18□□□□□ -1.74
MRPL54Q6P161 UBE3A-203ENST00000428984 2986 ntAPPRIS P3 TSL 5 BASIC4.18□□□□□ -1.74
MRPL54Q6P161 MIR99AHG-219ENST00000619222 3476 ntTSL 2 BASIC4.18□□□□□ -1.74
MRPL54Q6P161 PTPRO-210ENST00000544244 3978 ntAPPRIS ALT2 TSL 2 BASIC4.18□□□□□ -1.74
MRPL54Q6P161 MYO9A-209ENST00000564571 8111 ntAPPRIS ALT2 TSL 1 (best) BASIC4.18□□□□□ -1.74
MRPL54Q6P161 ZNF343-207ENST00000612935 3675 ntAPPRIS ALT2 TSL 5 BASIC4.18□□□□□ -1.74
MRPL54Q6P161 RBBP6-202ENST00000348022 5739 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
MRPL54Q6P161 SCG5-201ENST00000300175 1238 ntAPPRIS P4 TSL 1 (best) BASIC4.18□□□□□ -1.74
MRPL54Q6P161 AC010894.1-201ENST00000313760 361 ntBASIC4.18□□□□□ -1.74
MRPL54Q6P161 HBG1-201ENST00000330597 808 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
MRPL54Q6P161 TRIM69-202ENST00000338264 1222 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
MRPL54Q6P161 RNU1-5P-201ENST00000362684 144 ntBASIC4.18□□□□□ -1.74
MRPL54Q6P161 UBBP2-201ENST00000376781 231 ntBASIC4.18□□□□□ -1.74
MRPL54Q6P161 TRAV8-7-201ENST00000390456 341 ntAPPRIS P1 BASIC4.18□□□□□ -1.74
MRPL54Q6P161 PPIAP9-201ENST00000403866 498 ntBASIC4.18□□□□□ -1.74
MRPL54Q6P161 RN7SKP247-201ENST00000411094 308 ntBASIC4.18□□□□□ -1.74
MRPL54Q6P161 AC024937.2-201ENST00000411669 1242 ntBASIC4.18□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 73.8 ms