Protein–RNA interactions for Protein: Q07699

SCN1B, Sodium channel subunit beta-1, humanhuman

Predictions only

Length 218 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1BQ07699 ZNF567-203ENST00000585696 3734 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
SCN1BQ07699 USP7-202ENST00000381886 3587 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
SCN1BQ07699 LMO3-209ENST00000447609 3365 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
SCN1BQ07699 DTNA-227ENST00000597599 1869 ntAPPRIS ALT2 TSL 2 BASIC5.34□□□□□ -1.55
SCN1BQ07699 SLFN12L-205ENST00000628453 1767 ntAPPRIS ALT2 TSL 5 BASIC5.34□□□□□ -1.56
SCN1BQ07699 AC009962.1-201ENST00000567327 3813 ntBASIC5.34□□□□□ -1.56
SCN1BQ07699 ALG2-202ENST00000319033 1627 ntTSL 1 (best) BASIC5.34□□□□□ -1.56
SCN1BQ07699 ZNF610-208ENST00000613461 1643 ntAPPRIS ALT2 TSL 1 (best) BASIC5.34□□□□□ -1.56
SCN1BQ07699 RPL31P11-201ENST00000426558 1558 ntBASIC5.33□□□□□ -1.56
SCN1BQ07699 LINC01470-202ENST00000506723 2193 ntTSL 2 BASIC5.33□□□□□ -1.56
SCN1BQ07699 VNN2-201ENST00000326499 2118 ntAPPRIS P4 TSL 1 (best) BASIC5.33□□□□□ -1.56
SCN1BQ07699 RBMS2-202ENST00000542360 1484 ntTSL 2 BASIC5.33□□□□□ -1.56
SCN1BQ07699 CYP3A43-203ENST00000342499 1396 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
SCN1BQ07699 DOCK10-202ENST00000409592 7288 ntAPPRIS ALT2 TSL 1 (best) BASIC5.33□□□□□ -1.56
SCN1BQ07699 AF121898.1-201ENST00000440763 1860 ntTSL 5 BASIC5.33□□□□□ -1.56
SCN1BQ07699 MYO9A-203ENST00000444904 7749 ntAPPRIS P2 TSL 5 BASIC5.33□□□□□ -1.56
SCN1BQ07699 SLC26A7-208ENST00000523719 2902 ntAPPRIS P1 TSL 2 BASIC5.33□□□□□ -1.56
SCN1BQ07699 PEAK1-204ENST00000560626 19217 ntAPPRIS P1 TSL 5 BASIC5.33□□□□□ -1.56
SCN1BQ07699 ATRX-202ENST00000395603 10218 ntAPPRIS ALT2 TSL 1 (best) BASIC5.33□□□□□ -1.56
SCN1BQ07699 PTPRR-204ENST00000440835 2818 ntAPPRIS ALT2 TSL 1 (best) BASIC5.33□□□□□ -1.56
SCN1BQ07699 AC010894.1-201ENST00000313760 361 ntBASIC5.33□□□□□ -1.56
SCN1BQ07699 RN7SKP185-201ENST00000362813 326 ntBASIC5.33□□□□□ -1.56
SCN1BQ07699 SAMD13-203ENST00000370670 565 ntAPPRIS P1 TSL 4 BASIC5.33□□□□□ -1.56
SCN1BQ07699 SMPX-201ENST00000379494 938 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
SCN1BQ07699 AL034374.1-201ENST00000406329 351 ntBASIC5.33□□□□□ -1.56
SCN1BQ07699 AL033519.1-201ENST00000407266 307 ntBASIC5.33□□□□□ -1.56
SCN1BQ07699 PLGLB1-202ENST00000409310 960 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
SCN1BQ07699 GTF3AP6-201ENST00000432585 986 ntBASIC5.33□□□□□ -1.56
SCN1BQ07699 LHFPL3-AS1-204ENST00000433514 748 ntTSL 2 BASIC5.33□□□□□ -1.56
SCN1BQ07699 AL353898.1-201ENST00000444055 238 ntBASIC5.33□□□□□ -1.56
SCN1BQ07699 AL035551.1-201ENST00000446931 348 ntBASIC5.33□□□□□ -1.56
SCN1BQ07699 AC114752.1-201ENST00000448204 289 ntTSL 3 BASIC5.33□□□□□ -1.56
SCN1BQ07699 AL627224.1-201ENST00000448334 444 ntBASIC5.33□□□□□ -1.56
SCN1BQ07699 PPIAP32-201ENST00000449940 472 ntBASIC5.33□□□□□ -1.56
SCN1BQ07699 AC136489.1-203ENST00000450246 736 ntTSL 5 BASIC5.33□□□□□ -1.56
SCN1BQ07699 AL034369.1-201ENST00000453808 477 ntBASIC5.33□□□□□ -1.56
SCN1BQ07699 AC021087.2-201ENST00000504656 1203 ntBASIC5.33□□□□□ -1.56
SCN1BQ07699 AC027627.1-201ENST00000506895 753 ntTSL 3 BASIC5.33□□□□□ -1.56
SCN1BQ07699 TPM3P3-201ENST00000521343 354 ntBASIC5.33□□□□□ -1.56
SCN1BQ07699 ARL6IP1P3-201ENST00000524544 560 ntBASIC5.33□□□□□ -1.56
SCN1BQ07699 AC022874.1-201ENST00000526382 550 ntTSL 3 BASIC5.33□□□□□ -1.56
SCN1BQ07699 DEFB134-202ENST00000526438 1068 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
SCN1BQ07699 AC013549.3-201ENST00000528792 419 ntTSL 3 BASIC5.33□□□□□ -1.56
SCN1BQ07699 AC078778.2-201ENST00000553061 567 ntTSL 5 BASIC5.33□□□□□ -1.56
SCN1BQ07699 DUXA-201ENST00000554048 1006 ntAPPRIS P1 TSL 3 BASIC5.33□□□□□ -1.56
SCN1BQ07699 AC008914.1-201ENST00000576302 797 ntTSL 3 BASIC5.33□□□□□ -1.56
SCN1BQ07699 AC012594.1-252ENST00000595011 876 ntTSL 5 BASIC5.33□□□□□ -1.56
SCN1BQ07699 KATNBL1P1-201ENST00000605192 748 ntBASIC5.33□□□□□ -1.56
SCN1BQ07699 AC015712.7-201ENST00000615211 635 ntBASIC5.33□□□□□ -1.56
SCN1BQ07699 LINC02246-204ENST00000625278 740 ntTSL 5 BASIC5.33□□□□□ -1.56
SCN1BQ07699 AL139220.2-221ENST00000628123 395 ntTSL 5 BASIC5.33□□□□□ -1.56
SCN1BQ07699 AC002429.2-202ENST00000637269 394 ntAPPRIS P1 TSL 3 BASIC5.33□□□□□ -1.56
SCN1BQ07699 AC099654.15-201ENST00000639802 509 ntBASIC5.33□□□□□ -1.56
SCN1BQ07699 UGP2-232ENST00000640075 567 ntTSL 5 BASIC5.33□□□□□ -1.56
SCN1BQ07699 DCDC1-207ENST00000452803 1706 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
SCN1BQ07699 PEAK1-201ENST00000312493 11512 ntAPPRIS P1 TSL 5 BASIC5.33□□□□□ -1.56
SCN1BQ07699 ADGRG4-202ENST00000394141 8971 ntAPPRIS ALT2 TSL 1 (best) BASIC5.33□□□□□ -1.56
SCN1BQ07699 RBMX-203ENST00000431446 2004 ntTSL 2 BASIC5.33□□□□□ -1.56
SCN1BQ07699 LINC00504-201ENST00000505089 4672 ntTSL 2 BASIC5.33□□□□□ -1.56
SCN1BQ07699 NFKBIZ-203ENST00000394054 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC5.33□□□□□ -1.56
SCN1BQ07699 ZNF518B-201ENST00000326756 6894 ntAPPRIS P1 TSL 3 BASIC5.33□□□□□ -1.56
SCN1BQ07699 FKBP7-204ENST00000424785 2834 ntAPPRIS P3 TSL 1 (best) BASIC5.33□□□□□ -1.56
SCN1BQ07699 AC010127.1-209ENST00000447809 2305 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
SCN1BQ07699 AASDH-201ENST00000205214 3590 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
SCN1BQ07699 VSNL1-203ENST00000406397 2725 ntAPPRIS P1 TSL 5 BASIC5.32□□□□□ -1.56
SCN1BQ07699 ZNF189-201ENST00000259395 3115 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
SCN1BQ07699 VEPH1-205ENST00000468233 1401 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
SCN1BQ07699 STAMBPL1-202ENST00000371924 2208 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
SCN1BQ07699 FILIP1L-201ENST00000331335 4219 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
SCN1BQ07699 ARHGAP15-201ENST00000295095 1775 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
SCN1BQ07699 TEDDM1-201ENST00000367565 2500 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
SCN1BQ07699 ZNF107-205ENST00000613690 5589 ntAPPRIS ALT2 TSL 5 BASIC5.32□□□□□ -1.56
SCN1BQ07699 ZNF160-203ENST00000429604 4336 ntAPPRIS P1 TSL 3 BASIC5.32□□□□□ -1.56
SCN1BQ07699 AASDH-202ENST00000451613 3182 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
SCN1BQ07699 LINC01538-201ENST00000588074 2408 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
SCN1BQ07699 TTC39DP-201ENST00000416781 1688 ntBASIC5.32□□□□□ -1.56
SCN1BQ07699 HHLA2-206ENST00000467761 2379 ntAPPRIS P3 TSL 5 BASIC5.32□□□□□ -1.56
SCN1BQ07699 SPATA9-201ENST00000274432 1100 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
SCN1BQ07699 SNORA27.3-201ENST00000364937 134 ntBASIC5.32□□□□□ -1.56
SCN1BQ07699 RNA5SP485-201ENST00000365053 119 ntBASIC5.32□□□□□ -1.56
SCN1BQ07699 AC087752.1-201ENST00000391360 558 ntBASIC5.32□□□□□ -1.56
SCN1BQ07699 AL391422.1-201ENST00000402155 436 ntBASIC5.32□□□□□ -1.56
SCN1BQ07699 NUTM2A-AS1-203ENST00000413961 501 ntTSL 3 BASIC5.32□□□□□ -1.56
SCN1BQ07699 RPA2P2-201ENST00000419698 796 ntBASIC5.32□□□□□ -1.56
SCN1BQ07699 AL139184.1-202ENST00000422303 222 ntBASIC5.32□□□□□ -1.56
SCN1BQ07699 AC083862.1-201ENST00000427378 1242 ntBASIC5.32□□□□□ -1.56
SCN1BQ07699 AL590623.1-201ENST00000427864 105 ntBASIC5.32□□□□□ -1.56
SCN1BQ07699 PRH1-201ENST00000428168 603 ntAPPRIS ALT2 TSL 5 BASIC5.32□□□□□ -1.56
SCN1BQ07699 CACYBPP1-201ENST00000438592 684 ntBASIC5.32□□□□□ -1.56
SCN1BQ07699 AC234771.4-201ENST00000441416 730 ntBASIC5.32□□□□□ -1.56
SCN1BQ07699 AL136460.1-201ENST00000442389 473 ntTSL 3 BASIC5.32□□□□□ -1.56
SCN1BQ07699 AL355390.2-201ENST00000446691 880 ntTSL 5 BASIC5.32□□□□□ -1.56
SCN1BQ07699 RPL31P11-202ENST00000454082 372 ntBASIC5.32□□□□□ -1.56
SCN1BQ07699 AC015524.1-201ENST00000491585 472 ntBASIC5.32□□□□□ -1.56
SCN1BQ07699 AC124242.1-202ENST00000499554 1052 ntTSL 3 BASIC5.32□□□□□ -1.56
SCN1BQ07699 MGST2-204ENST00000506797 634 ntTSL 2 BASIC5.32□□□□□ -1.56
SCN1BQ07699 LNX1-AS1-204ENST00000514364 495 ntTSL 3 BASIC5.32□□□□□ -1.56
SCN1BQ07699 RNA5SP418-201ENST00000515951 117 ntBASIC5.32□□□□□ -1.56
SCN1BQ07699 MTCYBP19-201ENST00000517463 1124 ntBASIC5.32□□□□□ -1.56
SCN1BQ07699 AC022826.1-201ENST00000519383 805 ntBASIC5.32□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 92.5 ms