Protein–RNA interactions for Protein: Q04837

SSBP1, Single-stranded DNA-binding protein, mitochondrial, humanhuman

Known RBP Predictions only

Length 148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1Q04837 MIR3187-201ENST00000583431 70 ntBASIC4.7□□□□□ -1.66
SSBP1Q04837 AC063977.7-201ENST00000594454 337 ntBASIC4.7□□□□□ -1.66
SSBP1Q04837 AC243967.1-201ENST00000598976 578 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
SSBP1Q04837 FAM27E2-201ENST00000619668 403 ntBASIC4.7□□□□□ -1.66
SSBP1Q04837 AP000550.3-201ENST00000637734 379 ntBASIC4.7□□□□□ -1.66
SSBP1Q04837 AL357060.1-201ENST00000638039 977 ntTSL 5 BASIC4.7□□□□□ -1.66
SSBP1Q04837 PHLDB2-214ENST00000495180 4159 ntTSL 2 BASIC4.7□□□□□ -1.66
SSBP1Q04837 GLYATL1-202ENST00000317391 1627 ntAPPRIS ALT2 TSL 1 (best) BASIC4.7□□□□□ -1.66
SSBP1Q04837 MED13-201ENST00000397786 10465 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
SSBP1Q04837 FAM83B-201ENST00000306858 3167 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
SSBP1Q04837 SPAG6-209ENST00000538630 2376 ntTSL 5 BASIC4.7□□□□□ -1.66
SSBP1Q04837 POF1B-201ENST00000262753 3941 ntAPPRIS P3 TSL 1 (best) BASIC4.7□□□□□ -1.66
SSBP1Q04837 FGF1-215ENST00000619447 3818 ntAPPRIS P1 TSL 4 BASIC4.7□□□□□ -1.66
SSBP1Q04837 C5orf42-201ENST00000425232 11199 ntAPPRIS P2 TSL 5 BASIC4.7□□□□□ -1.66
SSBP1Q04837 ZNF652P1-201ENST00000442420 1309 ntBASIC4.7□□□□□ -1.66
SSBP1Q04837 PRUNE2-204ENST00000376718 12584 ntAPPRIS P3 TSL 5 BASIC4.7□□□□□ -1.66
SSBP1Q04837 CSMD3-201ENST00000297405 13212 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
SSBP1Q04837 RAP1GDS1-202ENST00000339360 2092 ntAPPRIS ALT1 TSL 1 (best) BASIC4.69□□□□□ -1.66
SSBP1Q04837 AC000374.1-201ENST00000434698 1745 ntBASIC4.69□□□□□ -1.66
SSBP1Q04837 LIPF-201ENST00000238983 1376 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
SSBP1Q04837 RAPH1-207ENST00000423104 1860 ntAPPRIS ALT2 TSL 5 BASIC4.69□□□□□ -1.66
SSBP1Q04837 RAPH1-209ENST00000439222 1854 ntAPPRIS ALT2 TSL 5 BASIC4.69□□□□□ -1.66
SSBP1Q04837 EMSY-206ENST00000525038 4376 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
SSBP1Q04837 AC114947.2-201ENST00000565748 2125 ntBASIC4.69□□□□□ -1.66
SSBP1Q04837 AC079298.1-201ENST00000625026 1619 ntBASIC4.69□□□□□ -1.66
SSBP1Q04837 MGC4859-201ENST00000634803 3118 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
SSBP1Q04837 OR8J2-201ENST00000641465 2883 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
SSBP1Q04837 RALGAPA1-204ENST00000553892 6271 ntTSL 5 BASIC4.69□□□□□ -1.66
SSBP1Q04837 ARHGEF12-202ENST00000397843 9660 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
SSBP1Q04837 GAPT-202ENST00000396776 3016 ntAPPRIS P1 TSL 2 BASIC4.69□□□□□ -1.66
SSBP1Q04837 SLC1A3-201ENST00000265113 4170 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
SSBP1Q04837 ATPAF1-212ENST00000542495 1779 ntTSL 2 BASIC4.69□□□□□ -1.66
SSBP1Q04837 EXO1-201ENST00000348581 3192 ntAPPRIS P3 TSL 1 (best) BASIC4.69□□□□□ -1.66
SSBP1Q04837 QRSL1P1-201ENST00000400977 1540 ntBASIC4.69□□□□□ -1.66
SSBP1Q04837 RNA5SP110-201ENST00000362638 115 ntBASIC4.69□□□□□ -1.66
SSBP1Q04837 RNU1-19P-201ENST00000363306 165 ntBASIC4.69□□□□□ -1.66
SSBP1Q04837 OR2J2-202ENST00000377167 1272 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
SSBP1Q04837 TRAV1-2-201ENST00000390423 402 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
SSBP1Q04837 RNU6-316P-201ENST00000391027 107 ntBASIC4.69□□□□□ -1.66
SSBP1Q04837 PSMA6P1-201ENST00000400275 741 ntBASIC4.69□□□□□ -1.66
SSBP1Q04837 HIST1H3PS1-201ENST00000404612 417 ntBASIC4.69□□□□□ -1.66
SSBP1Q04837 ATF2-205ENST00000409499 801 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
SSBP1Q04837 RN7SKP29-201ENST00000410957 272 ntBASIC4.69□□□□□ -1.66
SSBP1Q04837 RPL12P9-201ENST00000412942 488 ntBASIC4.69□□□□□ -1.66
SSBP1Q04837 AC078883.1-203ENST00000416080 654 ntTSL 3 BASIC4.69□□□□□ -1.66
SSBP1Q04837 AL929472.2-201ENST00000419993 481 ntTSL 5 BASIC4.69□□□□□ -1.66
SSBP1Q04837 AC007161.1-204ENST00000423039 460 ntBASIC4.69□□□□□ -1.66
SSBP1Q04837 AC010086.1-201ENST00000437359 1052 ntBASIC4.69□□□□□ -1.66
SSBP1Q04837 AL354793.1-201ENST00000446028 713 ntTSL 3 BASIC4.69□□□□□ -1.66
SSBP1Q04837 AL157385.1-201ENST00000446973 268 ntBASIC4.69□□□□□ -1.66
SSBP1Q04837 PPIAP7-201ENST00000454070 489 ntBASIC4.69□□□□□ -1.66
SSBP1Q04837 BBOF1-202ENST00000463558 550 ntAPPRIS ALT2 TSL 2 BASIC4.69□□□□□ -1.66
SSBP1Q04837 AC117386.1-201ENST00000474444 606 ntTSL 4 BASIC4.69□□□□□ -1.66
SSBP1Q04837 RPS4XP17-201ENST00000479057 754 ntBASIC4.69□□□□□ -1.66
SSBP1Q04837 RN7SL273P-201ENST00000481561 299 ntBASIC4.69□□□□□ -1.66
SSBP1Q04837 AC139720.1-201ENST00000509497 512 ntTSL 3 BASIC4.69□□□□□ -1.66
SSBP1Q04837 ZNF519P4-201ENST00000514008 125 ntBASIC4.69□□□□□ -1.66
SSBP1Q04837 AC009879.1-201ENST00000520029 839 ntBASIC4.69□□□□□ -1.66
SSBP1Q04837 AP000620.1-201ENST00000527147 504 ntBASIC4.69□□□□□ -1.66
SSBP1Q04837 GPRC5D-AS1-205ENST00000540198 404 ntTSL 5 BASIC4.69□□□□□ -1.66
SSBP1Q04837 GPRC5D-AS1-208ENST00000545914 566 ntTSL 3 BASIC4.69□□□□□ -1.66
SSBP1Q04837 CLMN-206ENST00000556441 452 ntTSL 5 BASIC4.69□□□□□ -1.66
SSBP1Q04837 AC005244.1-201ENST00000582566 339 ntBASIC4.69□□□□□ -1.66
SSBP1Q04837 AC092681.3-201ENST00000609463 678 ntBASIC4.69□□□□□ -1.66
SSBP1Q04837 Metazoa_SRP.35-201ENST00000611402 288 ntBASIC4.69□□□□□ -1.66
SSBP1Q04837 SSX4B-202ENST00000619890 1092 ntTSL 5 BASIC4.69□□□□□ -1.66
SSBP1Q04837 SSX4-202ENST00000620320 1092 ntTSL 5 BASIC4.69□□□□□ -1.66
SSBP1Q04837 LINC00506-201ENST00000628435 525 ntTSL 4 BASIC4.69□□□□□ -1.66
SSBP1Q04837 PHACTR2P1-202ENST00000636592 773 ntTSL 5 BASIC4.69□□□□□ -1.66
SSBP1Q04837 AC092329.4-204ENST00000639327 549 ntTSL 4 BASIC4.69□□□□□ -1.66
SSBP1Q04837 PWAR1-201ENST00000624188 2414 ntBASIC4.69□□□□□ -1.66
SSBP1Q04837 INTU-201ENST00000335251 13233 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
SSBP1Q04837 SNX10-202ENST00000396376 2491 ntAPPRIS P2 TSL 1 (best) BASIC4.69□□□□□ -1.66
SSBP1Q04837 GABRA1-218ENST00000637827 1838 ntAPPRIS P1 TSL 5 BASIC4.69□□□□□ -1.66
SSBP1Q04837 ECT2L-201ENST00000367682 4343 ntAPPRIS P1 TSL 5 BASIC4.69□□□□□ -1.66
SSBP1Q04837 CDK14-203ENST00000406263 5163 ntAPPRIS ALT2 TSL 1 (best) BASIC4.69□□□□□ -1.66
SSBP1Q04837 AP002512.4-201ENST00000641310 4672 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
SSBP1Q04837 AC112198.2-201ENST00000426589 6996 ntBASIC4.69□□□□□ -1.66
SSBP1Q04837 EDA2R-203ENST00000396050 3429 ntAPPRIS ALT2 TSL 5 BASIC4.68□□□□□ -1.66
SSBP1Q04837 MS4A7-211ENST00000534016 1378 ntTSL 2 BASIC4.68□□□□□ -1.66
SSBP1Q04837 FGL2-201ENST00000248598 4261 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
SSBP1Q04837 SULF1-204ENST00000458141 5551 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
SSBP1Q04837 RNA5SP30-201ENST00000365552 115 ntBASIC4.68□□□□□ -1.66
SSBP1Q04837 CDC123-202ENST00000378900 933 ntTSL 5 BASIC4.68□□□□□ -1.66
SSBP1Q04837 MIR301B-201ENST00000390813 78 ntBASIC4.68□□□□□ -1.66
SSBP1Q04837 AL117344.1-201ENST00000407196 616 ntBASIC4.68□□□□□ -1.66
SSBP1Q04837 AC016745.1-201ENST00000422178 508 ntTSL 5 BASIC4.68□□□□□ -1.66
SSBP1Q04837 AC244453.3-201ENST00000426275 459 ntTSL 5 BASIC4.68□□□□□ -1.66
SSBP1Q04837 AC004990.1-201ENST00000431722 564 ntTSL 4 BASIC4.68□□□□□ -1.66
SSBP1Q04837 LINC01506-201ENST00000432148 495 ntTSL 2 BASIC4.68□□□□□ -1.66
SSBP1Q04837 AC019117.1-202ENST00000439046 589 ntTSL 3 BASIC4.68□□□□□ -1.66
SSBP1Q04837 AL158214.1-201ENST00000444423 404 ntBASIC4.68□□□□□ -1.66
SSBP1Q04837 AC079612.2-201ENST00000446029 348 ntTSL 2 BASIC4.68□□□□□ -1.66
SSBP1Q04837 AL034380.1-201ENST00000448791 306 ntTSL 3 BASIC4.68□□□□□ -1.66
SSBP1Q04837 AC022133.1-201ENST00000490961 571 ntBASIC4.68□□□□□ -1.66
SSBP1Q04837 LINC02215-201ENST00000503320 543 ntTSL 4 BASIC4.68□□□□□ -1.66
SSBP1Q04837 LINC02114-201ENST00000503757 801 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
SSBP1Q04837 DUTP7-201ENST00000507982 486 ntBASIC4.68□□□□□ -1.66
SSBP1Q04837 LINC02383-201ENST00000508563 582 ntTSL 3 BASIC4.68□□□□□ -1.66
SSBP1Q04837 NPM1P21-201ENST00000513394 762 ntBASIC4.68□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 78 ms