Protein–RNA interactions for Protein: P98160

HSPG2, Basement membrane-specific heparan sulfate proteoglycan core protein, humanhuman

Predictions only

Length 4,391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2P98160 THAP12P9-201ENST00000503971 2360 ntBASIC3.32□□□□□ -1.88
HSPG2P98160 DHX40P1-201ENST00000588725 1412 ntBASIC3.32□□□□□ -1.88
HSPG2P98160 OR2J3-202ENST00000641151 3297 ntAPPRIS P1 BASIC3.32□□□□□ -1.88
HSPG2P98160 FAM205BP-203ENST00000455647 3752 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
HSPG2P98160 HTR4-206ENST00000520086 2272 ntTSL 2 BASIC3.32□□□□□ -1.88
HSPG2P98160 AC104066.2-201ENST00000564513 1741 ntTSL 3 BASIC3.32□□□□□ -1.88
HSPG2P98160 ZC3H11B-202ENST00000636126 4432 ntAPPRIS ALT1 TSL 2 BASIC3.32□□□□□ -1.88
HSPG2P98160 LINC02523-201ENST00000423208 2963 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
HSPG2P98160 MTF1-201ENST00000373036 7972 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
HSPG2P98160 SYNPO2-202ENST00000429713 9920 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
HSPG2P98160 TGFBR3-207ENST00000525962 3927 ntAPPRIS P3 TSL 1 (best) BASIC3.32□□□□□ -1.88
HSPG2P98160 LRRC8B-203ENST00000439853 7474 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
HSPG2P98160 ARL4A-205ENST00000404894 840 ntAPPRIS P1 TSL 2 BASIC3.32□□□□□ -1.88
HSPG2P98160 AL596266.1-201ENST00000448132 400 ntBASIC3.32□□□□□ -1.88
HSPG2P98160 RBMY2TP-201ENST00000451162 947 ntBASIC3.32□□□□□ -1.88
HSPG2P98160 LINC02265-201ENST00000510551 957 ntTSL 2 BASIC3.32□□□□□ -1.88
HSPG2P98160 AZIN1-AS1-203ENST00000517996 756 ntTSL 3 BASIC3.32□□□□□ -1.88
HSPG2P98160 TRPM3-204ENST00000360823 5966 ntAPPRIS ALT2 TSL 5 BASIC3.32□□□□□ -1.88
HSPG2P98160 TRPC4-201ENST00000338947 2912 ntTSL 5 BASIC3.32□□□□□ -1.88
HSPG2P98160 LINC02085-201ENST00000465215 2051 ntTSL 2 BASIC3.32□□□□□ -1.88
HSPG2P98160 ST18-201ENST00000276480 6187 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
HSPG2P98160 KIAA0232-202ENST00000425103 7771 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
HSPG2P98160 AC114876.1-201ENST00000490962 1366 ntBASIC3.32□□□□□ -1.88
HSPG2P98160 RNF20-202ENST00000389120 3940 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
HSPG2P98160 MARF1-202ENST00000540441 7105 ntTSL 5 BASIC3.32□□□□□ -1.88
HSPG2P98160 NDST4-204ENST00000613194 3439 ntTSL 5 BASIC3.32□□□□□ -1.88
HSPG2P98160 RPS3AP23-201ENST00000401762 784 ntBASIC3.32□□□□□ -1.88
HSPG2P98160 GAS5-208ENST00000425771 242 ntTSL 3 BASIC3.32□□□□□ -1.88
HSPG2P98160 LINC01501-201ENST00000427523 409 ntTSL 3 BASIC3.32□□□□□ -1.88
HSPG2P98160 AL731534.1-201ENST00000434711 269 ntBASIC3.32□□□□□ -1.88
HSPG2P98160 TRIM60P9Y-201ENST00000438459 816 ntBASIC3.32□□□□□ -1.88
HSPG2P98160 TRIM60P11Y-201ENST00000445313 801 ntBASIC3.32□□□□□ -1.88
HSPG2P98160 AC092821.2-201ENST00000545710 2042 ntBASIC3.32□□□□□ -1.88
HSPG2P98160 UBL5-207ENST00000590068 390 ntAPPRIS P1 TSL 5 BASIC3.32□□□□□ -1.88
HSPG2P98160 AC022916.3-201ENST00000592961 742 ntBASIC3.32□□□□□ -1.88
HSPG2P98160 AC004890.3-201ENST00000605566 1095 ntBASIC3.32□□□□□ -1.88
HSPG2P98160 AC006338.2-201ENST00000616864 791 ntBASIC3.32□□□□□ -1.88
HSPG2P98160 UGT3A1-207ENST00000625798 3097 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
HSPG2P98160 FLNB-202ENST00000358537 9391 ntAPPRIS ALT1 TSL 1 (best) BASIC3.32□□□□□ -1.88
HSPG2P98160 C5orf64-203ENST00000505642 2970 ntTSL 2 BASIC3.32□□□□□ -1.88
HSPG2P98160 CCDC93-201ENST00000319432 6896 ntAPPRIS ALT1 TSL 5 BASIC3.32□□□□□ -1.88
HSPG2P98160 CCDC93-202ENST00000376300 6899 ntAPPRIS P2 TSL 1 (best) BASIC3.32□□□□□ -1.88
HSPG2P98160 MXRA5Y-201ENST00000420610 8000 ntBASIC3.32□□□□□ -1.88
HSPG2P98160 PLD5-208ENST00000536534 8721 ntAPPRIS P3 TSL 1 (best) BASIC3.32□□□□□ -1.88
HSPG2P98160 UTY-205ENST00000382896 6661 ntAPPRIS ALT2 TSL 1 (best) BASIC3.32□□□□□ -1.88
HSPG2P98160 UTY-211ENST00000540140 6652 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
HSPG2P98160 UTY-214ENST00000617789 6682 ntAPPRIS ALT2 TSL 1 (best) BASIC3.32□□□□□ -1.88
HSPG2P98160 CACNA1C-202ENST00000335762 6968 ntAPPRIS ALT2 TSL 5 BASIC3.32□□□□□ -1.88
HSPG2P98160 MEMO1-202ENST00000379383 1498 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
HSPG2P98160 AC022034.1-201ENST00000512867 2156 ntBASIC3.32□□□□□ -1.88
HSPG2P98160 CTAGE5-217ENST00000557038 2869 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
HSPG2P98160 SON-202ENST00000356577 8813 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
HSPG2P98160 AC092747.4-201ENST00000620519 1861 ntBASIC3.32□□□□□ -1.88
HSPG2P98160 AMD1-203ENST00000368882 3059 ntTSL 2 BASIC3.32□□□□□ -1.88
HSPG2P98160 TNFSF4-201ENST00000281834 3470 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
HSPG2P98160 NOTCH2-201ENST00000256646 11389 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
HSPG2P98160 TSHR-201ENST00000298171 4400 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
HSPG2P98160 WFDC9-201ENST00000326000 659 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
HSPG2P98160 GAPDHP15-201ENST00000398586 975 ntBASIC3.32□□□□□ -1.88
HSPG2P98160 MIR3681HG-202ENST00000412606 578 ntTSL 5 BASIC3.32□□□□□ -1.88
HSPG2P98160 RPL21P108-201ENST00000413857 481 ntBASIC3.32□□□□□ -1.88
HSPG2P98160 AC009237.10-201ENST00000414112 510 ntBASIC3.32□□□□□ -1.88
HSPG2P98160 AC009237.5-201ENST00000414271 501 ntBASIC3.32□□□□□ -1.88
HSPG2P98160 SVIL-AS1-202ENST00000414457 1243 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
HSPG2P98160 TEX41-203ENST00000420472 765 ntTSL 3 BASIC3.32□□□□□ -1.88
HSPG2P98160 RN7SL352P-201ENST00000466002 277 ntBASIC3.32□□□□□ -1.88
HSPG2P98160 HMGN2P25-201ENST00000486956 268 ntBASIC3.32□□□□□ -1.88
HSPG2P98160 RNA5SP392-201ENST00000516905 112 ntBASIC3.32□□□□□ -1.88
HSPG2P98160 TPM3P3-201ENST00000521343 354 ntBASIC3.32□□□□□ -1.88
HSPG2P98160 AC009652.2-201ENST00000527978 516 ntTSL 5 BASIC3.32□□□□□ -1.88
HSPG2P98160 MGAT4C-206ENST00000552435 550 ntTSL 4 BASIC3.32□□□□□ -1.88
HSPG2P98160 MIR3667-201ENST00000581025 74 ntBASIC3.32□□□□□ -1.88
HSPG2P98160 AC006130.2-201ENST00000586202 326 ntBASIC3.32□□□□□ -1.88
HSPG2P98160 CASP1-208ENST00000527979 1521 ntTSL 5 BASIC3.32□□□□□ -1.88
HSPG2P98160 VLDLR-203ENST00000382100 9163 ntAPPRIS P3 TSL 1 (best) BASIC3.32□□□□□ -1.88
HSPG2P98160 LYRM4-201ENST00000330636 7312 ntAPPRIS P3 TSL 1 (best) BASIC3.32□□□□□ -1.88
HSPG2P98160 AC022819.1-201ENST00000563495 3910 ntBASIC3.32□□□□□ -1.88
HSPG2P98160 CCDC62-205ENST00000537566 3537 ntAPPRIS ALT2 TSL 2 BASIC3.32□□□□□ -1.88
HSPG2P98160 EP400-204ENST00000389561 12317 ntAPPRIS P1 TSL 5 BASIC3.32□□□□□ -1.88
HSPG2P98160 IFIT2-201ENST00000371826 3489 ntAPPRIS P2 TSL 1 (best) BASIC3.31□□□□□ -1.88
HSPG2P98160 ERP27-201ENST00000266397 2096 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
HSPG2P98160 MUC6-201ENST00000421673 8006 ntAPPRIS P1 TSL 5 BASIC3.31□□□□□ -1.88
HSPG2P98160 AIMP1-203ENST00000442366 2519 ntAPPRIS P3 TSL 5 BASIC3.31□□□□□ -1.88
HSPG2P98160 OR11H6-201ENST00000315519 993 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
HSPG2P98160 RNA5SP326-201ENST00000363209 110 ntBASIC3.31□□□□□ -1.88
HSPG2P98160 RPL12P34-201ENST00000424532 479 ntBASIC3.31□□□□□ -1.88
HSPG2P98160 AC005674.1-201ENST00000503493 459 ntTSL 3 BASIC3.31□□□□□ -1.88
HSPG2P98160 LINC02271-202ENST00000506379 596 ntTSL 4 BASIC3.31□□□□□ -1.88
HSPG2P98160 OR8G5-201ENST00000524943 1041 ntBASIC3.31□□□□□ -1.88
HSPG2P98160 AC133555.2-201ENST00000550213 292 ntBASIC3.31□□□□□ -1.88
HSPG2P98160 AC025271.2-201ENST00000566990 800 ntTSL 3 BASIC3.31□□□□□ -1.88
HSPG2P98160 AC079414.3-201ENST00000612986 1090 ntBASIC3.31□□□□□ -1.88
HSPG2P98160 AC068631.1-223ENST00000625877 472 ntTSL 5 BASIC3.31□□□□□ -1.88
HSPG2P98160 AC013268.3-201ENST00000262716 2324 ntBASIC3.31□□□□□ -1.88
HSPG2P98160 SLMAP-206ENST00000428312 4132 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
HSPG2P98160 OR5H1-202ENST00000641874 5999 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
HSPG2P98160 CASC19-260ENST00000641828 2001 ntBASIC3.31□□□□□ -1.88
HSPG2P98160 PRLR-201ENST00000231423 1679 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
HSPG2P98160 AC104793.1-201ENST00000508189 2840 ntTSL 2 BASIC3.31□□□□□ -1.88
HSPG2P98160 C16orf62-204ENST00000448695 3353 ntTSL 5 BASIC3.31□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 121.8 ms