Protein–RNA interactions for Protein: P83916

CBX1, Chromobox protein homolog 1, humanhuman

Predictions only

Length 185 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBX1P83916 AL356309.2-201ENST00000454034 719 ntTSL 5 BASIC5.8□□□□□ -1.48
CBX1P83916 LINC02083-201ENST00000462835 515 ntTSL 3 BASIC5.8□□□□□ -1.48
CBX1P83916 RPL21P42-201ENST00000488408 464 ntBASIC5.8□□□□□ -1.48
CBX1P83916 AC091912.1-201ENST00000511351 248 ntBASIC5.8□□□□□ -1.48
CBX1P83916 LINC00861-202ENST00000517869 606 ntTSL 5 BASIC5.8□□□□□ -1.48
CBX1P83916 AL133399.1-201ENST00000527476 298 ntBASIC5.8□□□□□ -1.48
CBX1P83916 AC090022.1-201ENST00000546569 311 ntBASIC5.8□□□□□ -1.48
CBX1P83916 OR4C49P-201ENST00000563891 900 ntBASIC5.8□□□□□ -1.48
CBX1P83916 AL161912.3-201ENST00000605404 628 ntBASIC5.8□□□□□ -1.48
CBX1P83916 AC015849.6-201ENST00000605454 474 ntBASIC5.8□□□□□ -1.48
CBX1P83916 PACRG-210ENST00000611387 279 ntTSL 5 BASIC5.8□□□□□ -1.48
CBX1P83916 PCBP1-AS1-282ENST00000625783 826 ntTSL 5 BASIC5.8□□□□□ -1.48
CBX1P83916 A1CF-205ENST00000374001 9221 ntAPPRIS ALT1 TSL 5 BASIC5.8□□□□□ -1.48
CBX1P83916 OR2L5-201ENST00000355281 2429 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
CBX1P83916 ZNF273-204ENST00000476120 2000 ntAPPRIS P1 TSL 3 BASIC5.8□□□□□ -1.48
CBX1P83916 ICE2P1-201ENST00000512800 1849 ntBASIC5.8□□□□□ -1.48
CBX1P83916 LRRC8B-201ENST00000330947 7593 ntAPPRIS P1 TSL 5 BASIC5.8□□□□□ -1.48
CBX1P83916 SLC10A7-204ENST00000502607 1638 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
CBX1P83916 EEF1A1P16-201ENST00000325349 1414 ntBASIC5.8□□□□□ -1.48
CBX1P83916 GRIK2-204ENST00000369137 4272 ntTSL 5 BASIC5.8□□□□□ -1.48
CBX1P83916 OR51C1P-202ENST00000641159 1444 ntBASIC5.8□□□□□ -1.48
CBX1P83916 AC092447.5-201ENST00000429367 2741 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
CBX1P83916 CWF19L2-201ENST00000282251 3278 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
CBX1P83916 AL672167.1-205ENST00000641112 3080 ntBASIC5.8□□□□□ -1.48
CBX1P83916 SMAD4-202ENST00000398417 8495 ntAPPRIS P1 TSL 5 BASIC5.8□□□□□ -1.48
CBX1P83916 TESPA1-203ENST00000524622 4188 ntAPPRIS ALT2 TSL 1 (best) BASIC5.8□□□□□ -1.48
CBX1P83916 HCFC2P1-201ENST00000392864 1592 ntBASIC5.8□□□□□ -1.48
CBX1P83916 LINC01249-201ENST00000412134 2663 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
CBX1P83916 ADGRF2-202ENST00000398742 4895 ntAPPRIS P1 TSL 5 BASIC5.8□□□□□ -1.48
CBX1P83916 AC079248.1-201ENST00000427568 1546 ntBASIC5.79□□□□□ -1.48
CBX1P83916 MAPK10-208ENST00000395169 4049 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
CBX1P83916 C4orf17-204ENST00000514652 2542 ntAPPRIS ALT2 TSL 5 BASIC5.79□□□□□ -1.48
CBX1P83916 AC100757.1-201ENST00000616872 1835 ntBASIC5.79□□□□□ -1.48
CBX1P83916 AC006145.1-201ENST00000439234 2651 ntTSL 2 BASIC5.79□□□□□ -1.48
CBX1P83916 PROS2P-201ENST00000474651 1951 ntBASIC5.79□□□□□ -1.48
CBX1P83916 CLEC12A-202ENST00000350667 699 ntAPPRIS ALT2 TSL 1 (best) BASIC5.79□□□□□ -1.48
CBX1P83916 OR5B17-201ENST00000357377 946 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
CBX1P83916 RNU4-44P-201ENST00000363050 141 ntBASIC5.79□□□□□ -1.48
CBX1P83916 AC005522.1-201ENST00000395416 346 ntBASIC5.79□□□□□ -1.48
CBX1P83916 AL117344.1-201ENST00000407196 616 ntBASIC5.79□□□□□ -1.48
CBX1P83916 LIX1L-AS1-202ENST00000412239 570 ntTSL 2 BASIC5.79□□□□□ -1.48
CBX1P83916 OR52N3P-201ENST00000413417 934 ntBASIC5.79□□□□□ -1.48
CBX1P83916 AL158837.1-201ENST00000417644 452 ntTSL 2 BASIC5.79□□□□□ -1.48
CBX1P83916 AC106870.2-201ENST00000421411 691 ntTSL 3 BASIC5.79□□□□□ -1.48
CBX1P83916 AL034397.2-201ENST00000424241 857 ntTSL 2 BASIC5.79□□□□□ -1.48
CBX1P83916 TMEM183AP1-205ENST00000432739 290 ntBASIC5.79□□□□□ -1.48
CBX1P83916 CYCSP24-201ENST00000445119 316 ntBASIC5.79□□□□□ -1.48
CBX1P83916 AL445228.1-201ENST00000449525 333 ntTSL 3 BASIC5.79□□□□□ -1.48
CBX1P83916 RN7SL643P-201ENST00000471845 291 ntBASIC5.79□□□□□ -1.48
CBX1P83916 AC025271.1-201ENST00000485045 429 ntBASIC5.79□□□□□ -1.48
CBX1P83916 RN7SL776P-201ENST00000493390 268 ntBASIC5.79□□□□□ -1.48
CBX1P83916 ARL4AP1-201ENST00000503220 705 ntBASIC5.79□□□□□ -1.48
CBX1P83916 AC097534.1-201ENST00000507803 521 ntTSL 4 BASIC5.79□□□□□ -1.48
CBX1P83916 AC011405.1-203ENST00000510110 1067 ntTSL 3 BASIC5.79□□□□□ -1.48
CBX1P83916 HMGN1P9-201ENST00000515212 298 ntBASIC5.79□□□□□ -1.48
CBX1P83916 AC090809.1-201ENST00000524132 570 ntTSL 4 BASIC5.79□□□□□ -1.48
CBX1P83916 AC092490.1-202ENST00000540299 809 ntTSL 3 BASIC5.79□□□□□ -1.48
CBX1P83916 WBP2NL-210ENST00000543212 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC5.79□□□□□ -1.48
CBX1P83916 LINC02463-201ENST00000546414 497 ntTSL 3 BASIC5.79□□□□□ -1.48
CBX1P83916 HAGLR-211ENST00000549329 609 ntTSL 4 BASIC5.79□□□□□ -1.48
CBX1P83916 NF1P12-201ENST00000549593 583 ntBASIC5.79□□□□□ -1.48
CBX1P83916 GNG2-203ENST00000553432 577 ntTSL 4 BASIC5.79□□□□□ -1.48
CBX1P83916 AL161757.4-204ENST00000557136 834 ntTSL 3 BASIC5.79□□□□□ -1.48
CBX1P83916 LINC01917-201ENST00000565170 1037 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
CBX1P83916 AC024267.3-201ENST00000579673 562 ntTSL 5 BASIC5.79□□□□□ -1.48
CBX1P83916 RPS4XP16-202ENST00000595905 807 ntTSL 5 BASIC5.79□□□□□ -1.48
CBX1P83916 AC012511.1-201ENST00000608140 449 ntBASIC5.79□□□□□ -1.48
CBX1P83916 AC105265.3-202ENST00000610188 459 ntTSL 5 BASIC5.79□□□□□ -1.48
CBX1P83916 AC245033.2-201ENST00000621893 421 ntTSL 3 BASIC5.79□□□□□ -1.48
CBX1P83916 AC127071.2-201ENST00000623293 527 ntBASIC5.79□□□□□ -1.48
CBX1P83916 RAPH1-204ENST00000418114 1794 ntAPPRIS ALT2 TSL 5 BASIC5.79□□□□□ -1.48
CBX1P83916 RAPH1-205ENST00000419464 1779 ntAPPRIS ALT2 TSL 5 BASIC5.79□□□□□ -1.48
CBX1P83916 AC126474.2-201ENST00000623268 1750 ntBASIC5.79□□□□□ -1.48
CBX1P83916 AL034370.1-201ENST00000397254 1590 ntBASIC5.79□□□□□ -1.48
CBX1P83916 AC095038.1-201ENST00000429248 1591 ntBASIC5.79□□□□□ -1.48
CBX1P83916 CEACAMP10-201ENST00000489959 1721 ntTSL 2 BASIC5.79□□□□□ -1.48
CBX1P83916 ALCAM-205ENST00000472644 4189 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
CBX1P83916 CASC19-221ENST00000641309 1382 ntBASIC5.79□□□□□ -1.48
CBX1P83916 BCLAF1P2-201ENST00000624956 2609 ntBASIC5.78□□□□□ -1.48
CBX1P83916 MTERF1-201ENST00000351870 1997 ntAPPRIS P3 TSL 1 (best) BASIC5.78□□□□□ -1.48
CBX1P83916 PARP8-201ENST00000281631 7177 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
CBX1P83916 B3GNT5-201ENST00000326505 4123 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
CBX1P83916 CALB1-208ENST00000518457 1490 ntTSL 2 BASIC5.78□□□□□ -1.48
CBX1P83916 SLC5A12-202ENST00000396005 6250 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
CBX1P83916 TRPC5OS-201ENST00000371970 2806 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
CBX1P83916 OR8A1-203ENST00000641670 5709 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
CBX1P83916 NCOA3-201ENST00000371997 6750 ntAPPRIS ALT2 TSL 1 (best) BASIC5.78□□□□□ -1.48
CBX1P83916 RABL3-201ENST00000273375 3883 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
CBX1P83916 DEFB4A-201ENST00000302247 380 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
CBX1P83916 BCLAF1-201ENST00000353331 7110 ntTSL 5 BASIC5.78□□□□□ -1.48
CBX1P83916 PLAC1-201ENST00000359237 1131 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
CBX1P83916 MIR187-201ENST00000385062 109 ntBASIC5.78□□□□□ -1.48
CBX1P83916 LRRTM4-203ENST00000409282 2451 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
CBX1P83916 KCNJ13-202ENST00000409779 1099 ntTSL 2 BASIC5.78□□□□□ -1.48
CBX1P83916 AC104777.1-202ENST00000413247 774 ntTSL 5 BASIC5.78□□□□□ -1.48
CBX1P83916 AL096829.1-201ENST00000413677 457 ntBASIC5.78□□□□□ -1.48
CBX1P83916 NUTM2A-AS1-203ENST00000413961 501 ntTSL 3 BASIC5.78□□□□□ -1.48
CBX1P83916 RPS4XP5-201ENST00000419038 768 ntBASIC5.78□□□□□ -1.48
CBX1P83916 AP000221.1-201ENST00000419694 1046 ntTSL 3 BASIC5.78□□□□□ -1.48
CBX1P83916 ICA1L-210ENST00000425178 879 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 92.5 ms