Protein–RNA interactions for Protein: P78426

NKX6-1, Homeobox protein Nkx-6.1, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-1P78426 ANKS4B-201ENST00000311620 4352 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
NKX6-1P78426 CAGE1-203ENST00000379918 2877 ntAPPRIS ALT2 TSL 5 BASIC5.89□□□□□ -1.47
NKX6-1P78426 CYP2C8-201ENST00000371270 1923 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
NKX6-1P78426 GLIPR1L2-202ENST00000378692 1903 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
NKX6-1P78426 LYSMD3-201ENST00000315948 4259 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
NKX6-1P78426 AL133268.1-201ENST00000405676 1401 ntBASIC5.89□□□□□ -1.47
NKX6-1P78426 PI15-202ENST00000523773 1413 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
NKX6-1P78426 CPXCR1-203ENST00000614120 1485 ntAPPRIS P1 TSL 3 BASIC5.89□□□□□ -1.47
NKX6-1P78426 OR56B1-201ENST00000317121 2075 ntAPPRIS P1 BASIC5.89□□□□□ -1.47
NKX6-1P78426 TMPRSS15-201ENST00000284885 3947 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
NKX6-1P78426 AC036214.3-201ENST00000522938 1527 ntAPPRIS P1 TSL 2 BASIC5.89□□□□□ -1.47
NKX6-1P78426 MACF1-232ENST00000567887 24319 ntAPPRIS P5 TSL 5 BASIC5.89□□□□□ -1.47
NKX6-1P78426 EXTL2-201ENST00000370113 2835 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
NKX6-1P78426 AC008080.4-201ENST00000420185 1589 ntTSL 2 BASIC5.89□□□□□ -1.47
NKX6-1P78426 POLE2-206ENST00000554396 1581 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
NKX6-1P78426 DAZ3-202ENST00000382365 3503 ntAPPRIS P5 TSL 1 (best) BASIC5.88□□□□□ -1.47
NKX6-1P78426 LINC02060-201ENST00000506041 1626 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
NKX6-1P78426 AL355377.1-201ENST00000621125 1653 ntBASIC5.88□□□□□ -1.47
NKX6-1P78426 ST7-203ENST00000393443 2360 ntTSL 2 BASIC5.88□□□□□ -1.47
NKX6-1P78426 ZNF329-203ENST00000597186 3930 ntAPPRIS P1 TSL 5 BASIC5.88□□□□□ -1.47
NKX6-1P78426 ZCCHC6-206ENST00000375963 5379 ntAPPRIS P1 TSL 5 BASIC5.88□□□□□ -1.47
NKX6-1P78426 ANK2-226ENST00000612754 6134 ntTSL 5 BASIC5.88□□□□□ -1.47
NKX6-1P78426 ALB-214ENST00000509063 1911 ntTSL 5 BASIC5.88□□□□□ -1.47
NKX6-1P78426 PDE8B-208ENST00000505283 3474 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
NKX6-1P78426 MCTP2-208ENST00000557742 1957 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
NKX6-1P78426 ZHX3-205ENST00000432768 3551 ntAPPRIS P1 TSL 2 BASIC5.88□□□□□ -1.47
NKX6-1P78426 DPYD-202ENST00000370192 4412 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
NKX6-1P78426 OAS2-201ENST00000342315 3613 ntAPPRIS P3 TSL 1 (best) BASIC5.88□□□□□ -1.47
NKX6-1P78426 ZNF519-207ENST00000590202 2830 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
NKX6-1P78426 SRBD1-201ENST00000263736 3681 ntAPPRIS P1 TSL 2 BASIC5.88□□□□□ -1.47
NKX6-1P78426 AL121950.1-201ENST00000624993 2077 ntBASIC5.88□□□□□ -1.47
NKX6-1P78426 IL23R-201ENST00000347310 2912 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
NKX6-1P78426 RNA5SP435-201ENST00000364044 108 ntBASIC5.88□□□□□ -1.47
NKX6-1P78426 PRH2-201ENST00000381847 641 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
NKX6-1P78426 EEF1AKMT1-201ENST00000382754 875 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
NKX6-1P78426 RNU6-452P-201ENST00000384406 107 ntBASIC5.88□□□□□ -1.47
NKX6-1P78426 AC096537.2-201ENST00000413707 714 ntBASIC5.88□□□□□ -1.47
NKX6-1P78426 VPS26BP1-201ENST00000417155 755 ntBASIC5.88□□□□□ -1.47
NKX6-1P78426 MTCO2P21-201ENST00000419780 677 ntBASIC5.88□□□□□ -1.47
NKX6-1P78426 SLC9B1P4-201ENST00000421957 1288 ntBASIC5.88□□□□□ -1.47
NKX6-1P78426 PLA2G12AP2-201ENST00000424744 264 ntBASIC5.88□□□□□ -1.47
NKX6-1P78426 RPS10P21-201ENST00000430654 475 ntBASIC5.88□□□□□ -1.47
NKX6-1P78426 GTF2IP3-201ENST00000433887 494 ntBASIC5.88□□□□□ -1.47
NKX6-1P78426 GTF2A1-202ENST00000434192 1199 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
NKX6-1P78426 MRPS21P3-201ENST00000436696 262 ntBASIC5.88□□□□□ -1.47
NKX6-1P78426 MIR4432HG-201ENST00000441598 470 ntTSL 3 BASIC5.88□□□□□ -1.47
NKX6-1P78426 GAPDHP37-201ENST00000442317 968 ntBASIC5.88□□□□□ -1.47
NKX6-1P78426 AL592437.1-201ENST00000443781 492 ntBASIC5.88□□□□□ -1.47
NKX6-1P78426 OR51B8P-201ENST00000449892 769 ntBASIC5.88□□□□□ -1.47
NKX6-1P78426 ZNF886P-201ENST00000450781 723 ntBASIC5.88□□□□□ -1.47
NKX6-1P78426 AC092164.1-201ENST00000452212 726 ntTSL 2 BASIC5.88□□□□□ -1.47
NKX6-1P78426 NCK1-AS1-201ENST00000461864 1194 ntTSL 2 BASIC5.88□□□□□ -1.47
NKX6-1P78426 MTCO3P35-201ENST00000485582 781 ntBASIC5.88□□□□□ -1.47
NKX6-1P78426 LINC02006-201ENST00000488210 524 ntTSL 4 BASIC5.88□□□□□ -1.47
NKX6-1P78426 AC021006.1-201ENST00000489849 553 ntBASIC5.88□□□□□ -1.47
NKX6-1P78426 CCDC39-AS1-201ENST00000495357 283 ntTSL 3 BASIC5.88□□□□□ -1.47
NKX6-1P78426 MTERF4-220ENST00000495694 909 ntTSL 5 BASIC5.88□□□□□ -1.47
NKX6-1P78426 AC092546.1-202ENST00000505628 499 ntTSL 2 BASIC5.88□□□□□ -1.47
NKX6-1P78426 AC095057.1-201ENST00000507583 168 ntBASIC5.88□□□□□ -1.47
NKX6-1P78426 WDFY3-AS1-201ENST00000510449 493 ntTSL 3 BASIC5.88□□□□□ -1.47
NKX6-1P78426 AC008837.1-201ENST00000511513 412 ntBASIC5.88□□□□□ -1.47
NKX6-1P78426 HDAC2-AS2-209ENST00000519270 1244 ntTSL 4 BASIC5.88□□□□□ -1.47
NKX6-1P78426 ZFPM2-AS1-207ENST00000524045 987 ntTSL 3 BASIC5.88□□□□□ -1.47
NKX6-1P78426 DUXAP5-201ENST00000529668 529 ntBASIC5.88□□□□□ -1.47
NKX6-1P78426 AC107884.2-201ENST00000530963 550 ntTSL 4 BASIC5.88□□□□□ -1.47
NKX6-1P78426 SPIC-201ENST00000551346 1132 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
NKX6-1P78426 OR11H3P-201ENST00000554547 982 ntBASIC5.88□□□□□ -1.47
NKX6-1P78426 AC026826.3-201ENST00000561747 158 ntBASIC5.88□□□□□ -1.47
NKX6-1P78426 AC138811.2-201ENST00000567078 764 ntAPPRIS P1 TSL 3 BASIC5.88□□□□□ -1.47
NKX6-1P78426 MMP2-AS1-202ENST00000569037 553 ntTSL 5 BASIC5.88□□□□□ -1.47
NKX6-1P78426 LINC01572-205ENST00000570152 360 ntTSL 3 BASIC5.88□□□□□ -1.47
NKX6-1P78426 AP000897.2-201ENST00000579509 1057 ntTSL 3 BASIC5.88□□□□□ -1.47
NKX6-1P78426 AC025809.1-201ENST00000585336 560 ntTSL 4 BASIC5.88□□□□□ -1.47
NKX6-1P78426 AC006305.3-201ENST00000590589 454 ntTSL 2 BASIC5.88□□□□□ -1.47
NKX6-1P78426 Z99289.3-201ENST00000605586 594 ntBASIC5.88□□□□□ -1.47
NKX6-1P78426 AC015982.1-201ENST00000608113 465 ntBASIC5.88□□□□□ -1.47
NKX6-1P78426 AC097065.2-201ENST00000608159 533 ntBASIC5.88□□□□□ -1.47
NKX6-1P78426 AC096586.1-201ENST00000610267 561 ntBASIC5.88□□□□□ -1.47
NKX6-1P78426 AL121890.3-201ENST00000618494 516 ntBASIC5.88□□□□□ -1.47
NKX6-1P78426 AC034229.6-201ENST00000623704 224 ntBASIC5.88□□□□□ -1.47
NKX6-1P78426 SNORA16A-202ENST00000628458 135 ntBASIC5.88□□□□□ -1.47
NKX6-1P78426 LINC00969-332ENST00000630874 738 ntTSL 5 BASIC5.88□□□□□ -1.47
NKX6-1P78426 AL357140.4-201ENST00000636827 412 ntBASIC5.88□□□□□ -1.47
NKX6-1P78426 GCNT2-218ENST00000640968 939 ntTSL 5 BASIC5.88□□□□□ -1.47
NKX6-1P78426 AC008691.1-209ENST00000642094 814 ntBASIC5.88□□□□□ -1.47
NKX6-1P78426 TTC41P-205ENST00000551270 3963 ntBASIC5.88□□□□□ -1.47
NKX6-1P78426 TPRG1-204ENST00000433971 2296 ntAPPRIS P1 TSL 2 BASIC5.88□□□□□ -1.47
NKX6-1P78426 C2orf73-208ENST00000615983 1376 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
NKX6-1P78426 OPRM1-206ENST00000419506 1402 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
NKX6-1P78426 VDAC2-214ENST00000543351 1424 ntAPPRIS P1 TSL 5 BASIC5.88□□□□□ -1.47
NKX6-1P78426 C11orf72-201ENST00000333139 2431 ntTSL 2 BASIC5.88□□□□□ -1.47
NKX6-1P78426 BDNF-211ENST00000439476 4532 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
NKX6-1P78426 PDE4D-226ENST00000546160 7690 ntTSL 5 BASIC5.88□□□□□ -1.47
NKX6-1P78426 SLC16A4-201ENST00000369779 2632 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
NKX6-1P78426 CHORDC1-201ENST00000320585 2654 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
NKX6-1P78426 DAZ2-202ENST00000382306 3781 ntAPPRIS ALT2 TSL 5 BASIC5.88□□□□□ -1.47
NKX6-1P78426 AC099062.1-202ENST00000640362 3864 ntTSL 5 BASIC5.88□□□□□ -1.47
NKX6-1P78426 TM9SF4-202ENST00000398022 3978 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
NKX6-1P78426 PUM1-206ENST00000426105 4043 ntAPPRIS ALT1 TSL 1 (best) BASIC5.88□□□□□ -1.47
NKX6-1P78426 TMCO5A-205ENST00000559502 1939 ntAPPRIS ALT2 TSL 2 BASIC5.87□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 103.9 ms