Protein–RNA interactions for Protein: P61758

VBP1, Prefoldin subunit 3, humanhuman

Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VBP1P61758 AC079600.3-201ENST00000547898 447 ntTSL 5 BASIC5.06□□□□□ -1.6
VBP1P61758 LINC00640-204ENST00000557295 708 ntTSL 5 BASIC5.06□□□□□ -1.6
VBP1P61758 RPS15A-203ENST00000563390 525 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
VBP1P61758 AC010287.1-201ENST00000566916 357 ntBASIC5.06□□□□□ -1.6
VBP1P61758 LINC01572-205ENST00000570152 360 ntTSL 3 BASIC5.06□□□□□ -1.6
VBP1P61758 RPS4XP16-202ENST00000595905 807 ntTSL 5 BASIC5.06□□□□□ -1.6
VBP1P61758 AP001823.1-201ENST00000604056 1003 ntBASIC5.06□□□□□ -1.6
VBP1P61758 LINC01050-201ENST00000604485 760 ntTSL 3 BASIC5.06□□□□□ -1.6
VBP1P61758 IGLCOR22-2-201ENST00000605398 313 ntBASIC5.06□□□□□ -1.6
VBP1P61758 AL008729.2-201ENST00000606393 473 ntBASIC5.06□□□□□ -1.6
VBP1P61758 AL645933.2-201ENST00000606743 1207 ntBASIC5.06□□□□□ -1.6
VBP1P61758 PACRG-210ENST00000611387 279 ntTSL 5 BASIC5.06□□□□□ -1.6
VBP1P61758 Metazoa_SRP.94-201ENST00000612609 250 ntBASIC5.06□□□□□ -1.6
VBP1P61758 AL357562.1-201ENST00000624911 609 ntBASIC5.06□□□□□ -1.6
VBP1P61758 FP236241.1-206ENST00000625005 987 ntTSL 5 BASIC5.06□□□□□ -1.6
VBP1P61758 AD000090.1-201ENST00000638356 494 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
VBP1P61758 CASC19-238ENST00000641523 1558 ntBASIC5.06□□□□□ -1.6
VBP1P61758 INTU-201ENST00000335251 13233 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
VBP1P61758 OBSCN-210ENST00000570156 26925 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
VBP1P61758 PATE1-201ENST00000305738 1527 ntAPPRIS P2 TSL 1 (best) BASIC5.06□□□□□ -1.6
VBP1P61758 AC114947.2-201ENST00000565748 2125 ntBASIC5.06□□□□□ -1.6
VBP1P61758 HYDIN-201ENST00000288168 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC5.06□□□□□ -1.6
VBP1P61758 SLC15A2-201ENST00000295605 2379 ntTSL 2 BASIC5.06□□□□□ -1.6
VBP1P61758 CDC14A-206ENST00000635056 2056 ntTSL 2 BASIC5.06□□□□□ -1.6
VBP1P61758 RRH-201ENST00000317735 1455 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
VBP1P61758 SEPT7-203ENST00000399035 4066 ntAPPRIS ALT1 TSL 5 BASIC5.06□□□□□ -1.6
VBP1P61758 PLEKHS1-204ENST00000369310 2046 ntAPPRIS ALT2 TSL 1 (best) BASIC5.06□□□□□ -1.6
VBP1P61758 MAP2-202ENST00000360351 9711 ntAPPRIS P2 TSL 5 BASIC5.06□□□□□ -1.6
VBP1P61758 LGALS8-204ENST00000352231 1402 ntAPPRIS P4 TSL 2 BASIC5.06□□□□□ -1.6
VBP1P61758 CSMD3-201ENST00000297405 13212 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
VBP1P61758 EIF1AY-201ENST00000361365 1390 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
VBP1P61758 LTA4H-202ENST00000413268 1908 ntTSL 2 BASIC5.05□□□□□ -1.6
VBP1P61758 HSPA8P18-201ENST00000439846 1928 ntBASIC5.05□□□□□ -1.6
VBP1P61758 KCNJ10-205ENST00000638728 4351 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
VBP1P61758 UBXN7-201ENST00000296328 10568 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
VBP1P61758 LRRC8B-201ENST00000330947 7593 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
VBP1P61758 PAK3-213ENST00000620137 2130 ntTSL 5 BASIC5.05□□□□□ -1.6
VBP1P61758 AC117409.1-201ENST00000470499 1310 ntBASIC5.05□□□□□ -1.6
VBP1P61758 NUP155-202ENST00000381843 4200 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
VBP1P61758 SEC31A-201ENST00000264405 3447 ntTSL 2 BASIC5.05□□□□□ -1.6
VBP1P61758 AC104118.1-201ENST00000607625 1589 ntBASIC5.05□□□□□ -1.6
VBP1P61758 AC091305.2-201ENST00000624049 1576 ntBASIC5.05□□□□□ -1.6
VBP1P61758 PCDH11X-202ENST00000361655 4126 ntAPPRIS ALT2 TSL 1 (best) BASIC5.05□□□□□ -1.6
VBP1P61758 PAGE2-201ENST00000374965 456 ntTSL 2 BASIC5.05□□□□□ -1.6
VBP1P61758 PAGE2-202ENST00000374968 551 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
VBP1P61758 AC024937.2-201ENST00000411669 1242 ntBASIC5.05□□□□□ -1.6
VBP1P61758 AC235097.1-201ENST00000412163 681 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
VBP1P61758 AC007879.3-201ENST00000417096 556 ntTSL 4 BASIC5.05□□□□□ -1.6
VBP1P61758 RPL35AP31-201ENST00000418340 337 ntBASIC5.05□□□□□ -1.6
VBP1P61758 AC092687.1-201ENST00000418835 389 ntTSL 3 BASIC5.05□□□□□ -1.6
VBP1P61758 AP000221.1-201ENST00000419694 1046 ntTSL 3 BASIC5.05□□□□□ -1.6
VBP1P61758 LINC01687-203ENST00000420255 897 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
VBP1P61758 PTPN2P1-201ENST00000423212 1072 ntBASIC5.05□□□□□ -1.6
VBP1P61758 OSTCP4-201ENST00000424397 449 ntBASIC5.05□□□□□ -1.6
VBP1P61758 AC094019.1-201ENST00000434678 472 ntBASIC5.05□□□□□ -1.6
VBP1P61758 AL445928.1-201ENST00000435545 222 ntBASIC5.05□□□□□ -1.6
VBP1P61758 LINC01681-201ENST00000439184 760 ntTSL 2 BASIC5.05□□□□□ -1.6
VBP1P61758 OR7E116P-201ENST00000448529 957 ntBASIC5.05□□□□□ -1.6
VBP1P61758 L29074.1-201ENST00000456072 534 ntTSL 5 BASIC5.05□□□□□ -1.6
VBP1P61758 RNU7-157P-201ENST00000459600 66 ntBASIC5.05□□□□□ -1.6
VBP1P61758 AC021660.1-201ENST00000465006 554 ntBASIC5.05□□□□□ -1.6
VBP1P61758 GTPBP8-204ENST00000467752 686 ntTSL 5 BASIC5.05□□□□□ -1.6
VBP1P61758 NIP7P2-201ENST00000485801 544 ntBASIC5.05□□□□□ -1.6
VBP1P61758 AC016746.1-201ENST00000489557 831 ntTSL 2 BASIC5.05□□□□□ -1.6
VBP1P61758 RN7SL346P-201ENST00000491561 294 ntBASIC5.05□□□□□ -1.6
VBP1P61758 CLDND1-205ENST00000502288 560 ntTSL 4 BASIC5.05□□□□□ -1.6
VBP1P61758 AC008592.2-201ENST00000506070 571 ntTSL 3 BASIC5.05□□□□□ -1.6
VBP1P61758 AC008629.1-201ENST00000506486 812 ntTSL 3 BASIC5.05□□□□□ -1.6
VBP1P61758 AC097451.1-201ENST00000507388 653 ntTSL 3 BASIC5.05□□□□□ -1.6
VBP1P61758 AC010451.1-201ENST00000509057 556 ntTSL 3 BASIC5.05□□□□□ -1.6
VBP1P61758 MGC32805-204ENST00000509993 783 ntTSL 2 BASIC5.05□□□□□ -1.6
VBP1P61758 AC016559.2-201ENST00000510759 359 ntBASIC5.05□□□□□ -1.6
VBP1P61758 AC010834.1-201ENST00000517998 696 ntTSL 2 BASIC5.05□□□□□ -1.6
VBP1P61758 TPT1-AS1-213ENST00000521336 759 ntTSL 5 BASIC5.05□□□□□ -1.6
VBP1P61758 AC090150.1-201ENST00000521408 585 ntTSL 4 BASIC5.05□□□□□ -1.6
VBP1P61758 SLC25A51P2-201ENST00000535708 889 ntBASIC5.05□□□□□ -1.6
VBP1P61758 AC137590.1-201ENST00000542422 495 ntTSL 3 BASIC5.05□□□□□ -1.6
VBP1P61758 AC008149.1-201ENST00000551844 525 ntTSL 4 BASIC5.05□□□□□ -1.6
VBP1P61758 AL139354.1-201ENST00000554319 645 ntTSL 5 BASIC5.05□□□□□ -1.6
VBP1P61758 AL121852.1-201ENST00000554665 430 ntTSL 3 BASIC5.05□□□□□ -1.6
VBP1P61758 AL161757.3-201ENST00000555316 807 ntTSL 3 BASIC5.05□□□□□ -1.6
VBP1P61758 AC073941.1-201ENST00000559148 539 ntTSL 4 BASIC5.05□□□□□ -1.6
VBP1P61758 MIR4685-201ENST00000578185 69 ntBASIC5.05□□□□□ -1.6
VBP1P61758 AC106037.2-201ENST00000578583 447 ntTSL 5 BASIC5.05□□□□□ -1.6
VBP1P61758 PRPF19P1-201ENST00000584766 898 ntBASIC5.05□□□□□ -1.6
VBP1P61758 AC026898.1-201ENST00000586404 571 ntBASIC5.05□□□□□ -1.6
VBP1P61758 AC092316.1-201ENST00000598703 297 ntTSL 5 BASIC5.05□□□□□ -1.6
VBP1P61758 AL161457.2-204ENST00000609241 869 ntTSL 5 BASIC5.05□□□□□ -1.6
VBP1P61758 MILR1-203ENST00000615220 1196 ntAPPRIS P3 TSL 2 BASIC5.05□□□□□ -1.6
VBP1P61758 AC244517.6-202ENST00000623884 566 ntAPPRIS P1 TSL 4 BASIC5.05□□□□□ -1.6
VBP1P61758 AC133485.6-201ENST00000624045 688 ntBASIC5.05□□□□□ -1.6
VBP1P61758 COPS7B-225ENST00000631349 189 ntTSL 5 BASIC5.05□□□□□ -1.6
VBP1P61758 LINC01002-237ENST00000634025 555 ntTSL 5 BASIC5.05□□□□□ -1.6
VBP1P61758 RANBP3L-204ENST00000515759 1532 ntTSL 2 BASIC5.05□□□□□ -1.6
VBP1P61758 CCNB3-201ENST00000276014 4513 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
VBP1P61758 RNF111-212ENST00000561186 4536 ntTSL 2 BASIC5.05□□□□□ -1.6
VBP1P61758 ANKRD30A-202ENST00000374660 4762 ntAPPRIS ALT2 TSL 5 BASIC5.05□□□□□ -1.6
VBP1P61758 SMARCA2-201ENST00000302401 2242 ntTSL 2 BASIC5.05□□□□□ -1.6
VBP1P61758 PDE10A-201ENST00000366882 8233 ntAPPRIS P3 TSL 5 BASIC5.05□□□□□ -1.6
VBP1P61758 ZNF285-205ENST00000614994 6012 ntAPPRIS P3 TSL 1 (best) BASIC5.05□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 92.7 ms