Protein–RNA interactions for Protein: P59780

AP3S2, AP-3 complex subunit sigma-2, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S2P59780 MPDZ-204ENST00000381022 7589 ntAPPRIS ALT2 TSL 5 BASIC4.86□□□□□ -1.63
AP3S2P59780 AC016747.4-201ENST00000462959 1383 ntTSL 2 BASIC4.86□□□□□ -1.63
AP3S2P59780 TRIM51GP-201ENST00000534741 1350 ntBASIC4.86□□□□□ -1.63
AP3S2P59780 AC019197.1-201ENST00000638199 3611 ntTSL 5 BASIC4.86□□□□□ -1.63
AP3S2P59780 CASC19-201ENST00000500112 5735 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
AP3S2P59780 CASC19-238ENST00000641523 1558 ntBASIC4.86□□□□□ -1.63
AP3S2P59780 AC245100.2-201ENST00000454544 1679 ntBASIC4.86□□□□□ -1.63
AP3S2P59780 AC073136.1-201ENST00000449426 2884 ntBASIC4.86□□□□□ -1.63
AP3S2P59780 DROSHA-212ENST00000511367 5305 ntAPPRIS P4 TSL 1 (best) BASIC4.86□□□□□ -1.63
AP3S2P59780 ZNF420-202ENST00000337995 3535 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
AP3S2P59780 AL359715.3-201ENST00000569267 2123 ntBASIC4.85□□□□□ -1.63
AP3S2P59780 VPS50-202ENST00000305866 3613 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
AP3S2P59780 GNL2P1-201ENST00000451274 2190 ntBASIC4.85□□□□□ -1.63
AP3S2P59780 C3orf67-AS1-202ENST00000482372 2203 ntTSL 2 BASIC4.85□□□□□ -1.63
AP3S2P59780 KLHL13-206ENST00000469946 2353 ntTSL 2 BASIC4.85□□□□□ -1.63
AP3S2P59780 CAST-207ENST00000395813 4356 ntAPPRIS ALT2 TSL 5 BASIC4.85□□□□□ -1.63
AP3S2P59780 AC006145.1-201ENST00000439234 2651 ntTSL 2 BASIC4.85□□□□□ -1.63
AP3S2P59780 RASSF6-204ENST00000395777 2735 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
AP3S2P59780 AL157756.1-201ENST00000532515 2859 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
AP3S2P59780 GOLPH3L-201ENST00000271732 2999 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
AP3S2P59780 UBE3A-203ENST00000428984 2986 ntAPPRIS P3 TSL 5 BASIC4.85□□□□□ -1.63
AP3S2P59780 RNA5SP485-201ENST00000365053 119 ntBASIC4.85□□□□□ -1.63
AP3S2P59780 APOA2-201ENST00000367990 474 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
AP3S2P59780 OR10R2-201ENST00000368152 1008 ntAPPRIS P2 BASIC4.85□□□□□ -1.63
AP3S2P59780 OR51A2-201ENST00000380371 942 ntAPPRIS P1 BASIC4.85□□□□□ -1.63
AP3S2P59780 AL132875.1-201ENST00000403623 949 ntBASIC4.85□□□□□ -1.63
AP3S2P59780 CTSL3P-202ENST00000412179 788 ntBASIC4.85□□□□□ -1.63
AP3S2P59780 AC104463.2-201ENST00000428573 314 ntTSL 5 BASIC4.85□□□□□ -1.63
AP3S2P59780 DEFA9P-201ENST00000433042 285 ntBASIC4.85□□□□□ -1.63
AP3S2P59780 AC104849.1-201ENST00000462623 405 ntBASIC4.85□□□□□ -1.63
AP3S2P59780 AC023245.1-201ENST00000468501 517 ntBASIC4.85□□□□□ -1.63
AP3S2P59780 HLTF-AS1-201ENST00000492461 415 ntTSL 3 BASIC4.85□□□□□ -1.63
AP3S2P59780 AC114956.3-202ENST00000505645 482 ntTSL 5 BASIC4.85□□□□□ -1.63
AP3S2P59780 AC105345.2-201ENST00000515186 664 ntTSL 3 BASIC4.85□□□□□ -1.63
AP3S2P59780 TMEM116-208ENST00000549537 1229 ntAPPRIS ALT2 TSL 2 BASIC4.85□□□□□ -1.63
AP3S2P59780 LSM3P2-201ENST00000551246 273 ntBASIC4.85□□□□□ -1.63
AP3S2P59780 AL049836.2-201ENST00000553318 513 ntTSL 5 BASIC4.85□□□□□ -1.63
AP3S2P59780 AL157871.6-201ENST00000553954 206 ntTSL 2 BASIC4.85□□□□□ -1.63
AP3S2P59780 SETP1-201ENST00000556014 845 ntBASIC4.85□□□□□ -1.63
AP3S2P59780 AC009562.1-202ENST00000558755 565 ntTSL 4 BASIC4.85□□□□□ -1.63
AP3S2P59780 AC087292.1-201ENST00000573371 512 ntTSL 5 BASIC4.85□□□□□ -1.63
AP3S2P59780 AC098847.2-201ENST00000588088 528 ntTSL 5 BASIC4.85□□□□□ -1.63
AP3S2P59780 MIR7515HG-250ENST00000592565 856 ntTSL 5 BASIC4.85□□□□□ -1.63
AP3S2P59780 SLC14A2-AS1-204ENST00000592899 359 ntTSL 3 BASIC4.85□□□□□ -1.63
AP3S2P59780 MILR1-203ENST00000615220 1196 ntAPPRIS P3 TSL 2 BASIC4.85□□□□□ -1.63
AP3S2P59780 AC244100.1-201ENST00000618141 407 ntTSL 5 BASIC4.85□□□□□ -1.63
AP3S2P59780 COPS7B-225ENST00000631349 189 ntTSL 5 BASIC4.85□□□□□ -1.63
AP3S2P59780 AC087565.2-201ENST00000637695 952 ntTSL 5 BASIC4.85□□□□□ -1.63
AP3S2P59780 UQCRC2P1-201ENST00000417777 1332 ntBASIC4.85□□□□□ -1.63
AP3S2P59780 EIF3EP1-201ENST00000433978 1316 ntBASIC4.85□□□□□ -1.63
AP3S2P59780 NEAT1-202ENST00000501122 22743 ntBASIC4.85□□□□□ -1.63
AP3S2P59780 OFD1P9Y-201ENST00000417699 1491 ntBASIC4.85□□□□□ -1.63
AP3S2P59780 GHR-210ENST00000615111 4814 ntAPPRIS P1 TSL 5 BASIC4.85□□□□□ -1.63
AP3S2P59780 LINC01808-203ENST00000641932 1643 ntBASIC4.85□□□□□ -1.63
AP3S2P59780 CLIP1-AS1-201ENST00000535976 1745 ntTSL 3 BASIC4.85□□□□□ -1.63
AP3S2P59780 IQCM-205ENST00000636414 1844 ntAPPRIS ALT2 TSL 5 BASIC4.85□□□□□ -1.63
AP3S2P59780 SLCO1B7-201ENST00000421593 1923 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
AP3S2P59780 MFSD8-219ENST00000641228 2559 ntBASIC4.85□□□□□ -1.63
AP3S2P59780 AC006206.1-201ENST00000544842 3387 ntBASIC4.85□□□□□ -1.63
AP3S2P59780 CTAGE5-210ENST00000553728 4392 ntAPPRIS ALT2 TSL 5 BASIC4.85□□□□□ -1.63
AP3S2P59780 RC3H1-201ENST00000258349 10988 ntAPPRIS P3 TSL 1 (best) BASIC4.85□□□□□ -1.63
AP3S2P59780 CDH19-201ENST00000262150 6341 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
AP3S2P59780 TESPA1-203ENST00000524622 4188 ntAPPRIS ALT2 TSL 1 (best) BASIC4.84□□□□□ -1.63
AP3S2P59780 MYO16-201ENST00000251041 3492 ntTSL 5 BASIC4.84□□□□□ -1.63
AP3S2P59780 MYBPC1-216ENST00000550270 3426 ntAPPRIS ALT2 TSL 5 BASIC4.84□□□□□ -1.63
AP3S2P59780 LINC00309-201ENST00000431020 3307 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
AP3S2P59780 NPY6R-202ENST00000510937 2988 ntTSL 3 BASIC4.84□□□□□ -1.63
AP3S2P59780 DTNA-202ENST00000283365 6522 ntTSL 5 BASIC4.84□□□□□ -1.63
AP3S2P59780 AC008695.1-201ENST00000514667 6393 ntAPPRIS P1 TSL 2 BASIC4.84□□□□□ -1.63
AP3S2P59780 ADAM5-202ENST00000399789 1942 ntBASIC4.84□□□□□ -1.63
AP3S2P59780 CEP85L-201ENST00000360290 1736 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
AP3S2P59780 FOXP2-202ENST00000360232 1412 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
AP3S2P59780 DDX58-201ENST00000379868 4089 ntTSL 5 BASIC4.84□□□□□ -1.63
AP3S2P59780 EMC2-201ENST00000220853 1243 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
AP3S2P59780 TAS2R16-201ENST00000249284 997 ntAPPRIS P1 BASIC4.84□□□□□ -1.63
AP3S2P59780 OR1L4-201ENST00000259466 936 ntAPPRIS P1 BASIC4.84□□□□□ -1.63
AP3S2P59780 AL353740.1-201ENST00000366253 575 ntTSL 2 BASIC4.84□□□□□ -1.63
AP3S2P59780 MLIP-203ENST00000370877 1234 ntAPPRIS ALT2 TSL 5 BASIC4.84□□□□□ -1.63
AP3S2P59780 PLIN2-202ENST00000380464 655 ntTSL 2 BASIC4.84□□□□□ -1.63
AP3S2P59780 AL157702.1-201ENST00000398764 426 ntBASIC4.84□□□□□ -1.63
AP3S2P59780 COX5BP7-201ENST00000414780 274 ntBASIC4.84□□□□□ -1.63
AP3S2P59780 AL360013.1-201ENST00000419031 858 ntBASIC4.84□□□□□ -1.63
AP3S2P59780 AL158166.2-201ENST00000420845 748 ntTSL 2 BASIC4.84□□□□□ -1.63
AP3S2P59780 FECHP1-201ENST00000431896 1214 ntBASIC4.84□□□□□ -1.63
AP3S2P59780 GAPDHP37-201ENST00000442317 968 ntBASIC4.84□□□□□ -1.63
AP3S2P59780 AC021660.1-201ENST00000465006 554 ntBASIC4.84□□□□□ -1.63
AP3S2P59780 AC005165.2-201ENST00000466070 380 ntBASIC4.84□□□□□ -1.63
AP3S2P59780 GLYCTK-AS1-202ENST00000472761 109 ntTSL 5 BASIC4.84□□□□□ -1.63
AP3S2P59780 RPS10P28-201ENST00000480396 498 ntBASIC4.84□□□□□ -1.63
AP3S2P59780 AC099521.1-201ENST00000482557 334 ntBASIC4.84□□□□□ -1.63
AP3S2P59780 BMPR1B-204ENST00000502683 567 ntTSL 4 BASIC4.84□□□□□ -1.63
AP3S2P59780 AC074255.1-201ENST00000511259 501 ntBASIC4.84□□□□□ -1.63
AP3S2P59780 RFPL4AP3-201ENST00000515267 345 ntBASIC4.84□□□□□ -1.63
AP3S2P59780 AC008250.1-201ENST00000539874 522 ntTSL 3 BASIC4.84□□□□□ -1.63
AP3S2P59780 AL358292.1-201ENST00000554181 412 ntTSL 2 BASIC4.84□□□□□ -1.63
AP3S2P59780 ETFRF1-211ENST00000557540 1259 ntAPPRIS ALT1 TSL 2 BASIC4.84□□□□□ -1.63
AP3S2P59780 AC040958.1-201ENST00000561102 201 ntBASIC4.84□□□□□ -1.63
AP3S2P59780 AC018552.1-201ENST00000562099 811 ntBASIC4.84□□□□□ -1.63
AP3S2P59780 AC009021.1-201ENST00000566098 375 ntTSL 5 BASIC4.84□□□□□ -1.63
AP3S2P59780 PINLYP-205ENST00000569031 557 ntTSL 2 BASIC4.84□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 98.9 ms