Protein–RNA interactions for Protein: P55854

SUMO3, Small ubiquitin-related modifier 3, humanhuman

Predicted RBP Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO3P55854 HNF1A-AS1-203ENST00000537361 659 ntTSL 3 BASIC5.83□□□□□ -1.48
SUMO3P55854 TWF1-207ENST00000548315 1170 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
SUMO3P55854 LINC02416-201ENST00000550019 540 ntTSL 4 BASIC5.83□□□□□ -1.48
SUMO3P55854 TMEM106C-215ENST00000550552 776 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
SUMO3P55854 SNHG14-221ENST00000554726 1116 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
SUMO3P55854 AC007923.1-201ENST00000577970 505 ntTSL 4 BASIC5.83□□□□□ -1.48
SUMO3P55854 DSG1-AS1-202ENST00000578477 588 ntTSL 3 BASIC5.83□□□□□ -1.48
SUMO3P55854 AC020915.3-201ENST00000595301 550 ntTSL 5 BASIC5.83□□□□□ -1.48
SUMO3P55854 AC112491.1-201ENST00000602890 248 ntTSL 5 BASIC5.83□□□□□ -1.48
SUMO3P55854 AL356274.1-201ENST00000617064 410 ntBASIC5.83□□□□□ -1.48
SUMO3P55854 SCRN1-210ENST00000631335 423 ntTSL 5 BASIC5.83□□□□□ -1.48
SUMO3P55854 AC134980.1-214ENST00000638815 687 ntTSL 5 BASIC5.83□□□□□ -1.48
SUMO3P55854 SLC10A7-204ENST00000502607 1638 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
SUMO3P55854 APOL6-201ENST00000409652 10121 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
SUMO3P55854 TCN1-201ENST00000257264 1582 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
SUMO3P55854 UBR4-204ENST00000375254 15906 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
SUMO3P55854 TBC1D23-202ENST00000394144 3677 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
SUMO3P55854 SLC25A30-204ENST00000519676 3670 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
SUMO3P55854 AL355306.2-206ENST00000635233 1903 ntTSL 5 BASIC5.83□□□□□ -1.48
SUMO3P55854 TRAF5-201ENST00000261464 3972 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
SUMO3P55854 MEF2C-202ENST00000424173 6336 ntAPPRIS P3 TSL 1 (best) BASIC5.83□□□□□ -1.48
SUMO3P55854 MED12L-206ENST00000474524 10744 ntAPPRIS P2 TSL 1 (best) BASIC5.83□□□□□ -1.48
SUMO3P55854 ENTPD1-AS1-202ENST00000416301 4241 ntTSL 2 BASIC5.83□□□□□ -1.48
SUMO3P55854 NF1-202ENST00000358273 12425 ntAPPRIS ALT1 TSL 1 (best) BASIC5.83□□□□□ -1.48
SUMO3P55854 LINC01822-201ENST00000435682 2098 ntTSL 2 BASIC5.83□□□□□ -1.48
SUMO3P55854 VEZF1-204ENST00000584396 2342 ntAPPRIS ALT2 TSL 5 BASIC5.82□□□□□ -1.48
SUMO3P55854 NALCN-201ENST00000251127 6818 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
SUMO3P55854 ZC3H11A-204ENST00000367214 3451 ntAPPRIS P1 TSL 2 BASIC5.82□□□□□ -1.48
SUMO3P55854 NEGR1-202ENST00000357731 12811 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
SUMO3P55854 AIMP1-203ENST00000442366 2519 ntAPPRIS P3 TSL 5 BASIC5.82□□□□□ -1.48
SUMO3P55854 AC062029.1-202ENST00000606164 3651 ntBASIC5.82□□□□□ -1.48
SUMO3P55854 METTL21EP-201ENST00000298105 713 ntBASIC5.82□□□□□ -1.48
SUMO3P55854 RNU6-236P-201ENST00000363886 106 ntBASIC5.82□□□□□ -1.48
SUMO3P55854 RNA5SP478-201ENST00000364657 115 ntBASIC5.82□□□□□ -1.48
SUMO3P55854 SNORA64.3-201ENST00000365647 134 ntBASIC5.82□□□□□ -1.48
SUMO3P55854 PSMD10-206ENST00000372296 878 ntTSL 5 BASIC5.82□□□□□ -1.48
SUMO3P55854 AL603865.2-201ENST00000401679 213 ntBASIC5.82□□□□□ -1.48
SUMO3P55854 PRELID1P1-201ENST00000403549 660 ntBASIC5.82□□□□□ -1.48
SUMO3P55854 RN7SKP199-201ENST00000410325 305 ntBASIC5.82□□□□□ -1.48
SUMO3P55854 RNU2-22P-201ENST00000411266 212 ntBASIC5.82□□□□□ -1.48
SUMO3P55854 LINC01811-201ENST00000415991 594 ntTSL 5 BASIC5.82□□□□□ -1.48
SUMO3P55854 OR51A6P-201ENST00000418680 1004 ntBASIC5.82□□□□□ -1.48
SUMO3P55854 AC003075.1-202ENST00000419382 720 ntTSL 3 BASIC5.82□□□□□ -1.48
SUMO3P55854 SLC4A1APP1-201ENST00000419995 602 ntBASIC5.82□□□□□ -1.48
SUMO3P55854 Z82198.3-201ENST00000421145 199 ntBASIC5.82□□□□□ -1.48
SUMO3P55854 AL031846.1-202ENST00000424436 592 ntTSL 2 BASIC5.82□□□□□ -1.48
SUMO3P55854 NANOGP5-201ENST00000424456 877 ntBASIC5.82□□□□□ -1.48
SUMO3P55854 AC015971.1-204ENST00000424788 1147 ntTSL 5 BASIC5.82□□□□□ -1.48
SUMO3P55854 AC092447.3-201ENST00000426027 686 ntBASIC5.82□□□□□ -1.48
SUMO3P55854 ITGA9-AS1-203ENST00000429532 702 ntTSL 5 BASIC5.82□□□□□ -1.48
SUMO3P55854 AL358972.1-201ENST00000434356 466 ntTSL 2 BASIC5.82□□□□□ -1.48
SUMO3P55854 RPSAP40-201ENST00000442343 891 ntBASIC5.82□□□□□ -1.48
SUMO3P55854 AC245291.3-201ENST00000443400 292 ntBASIC5.82□□□□□ -1.48
SUMO3P55854 AP000146.1-203ENST00000444178 309 ntTSL 3 BASIC5.82□□□□□ -1.48
SUMO3P55854 HSFY3P-201ENST00000444242 1191 ntBASIC5.82□□□□□ -1.48
SUMO3P55854 AL161722.1-201ENST00000446972 1032 ntBASIC5.82□□□□□ -1.48
SUMO3P55854 MIR4432HG-202ENST00000453476 703 ntTSL 3 BASIC5.82□□□□□ -1.48
SUMO3P55854 CREM-220ENST00000463314 964 ntTSL 2 BASIC5.82□□□□□ -1.48
SUMO3P55854 SSBP1-205ENST00000465582 731 ntAPPRIS P1 TSL 5 BASIC5.82□□□□□ -1.48
SUMO3P55854 AC109439.2-201ENST00000502421 564 ntTSL 4 BASIC5.82□□□□□ -1.48
SUMO3P55854 AC020699.1-201ENST00000505161 445 ntBASIC5.82□□□□□ -1.48
SUMO3P55854 LINC02353-201ENST00000515181 849 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
SUMO3P55854 GPX8-208ENST00000515370 1036 ntTSL 2 BASIC5.82□□□□□ -1.48
SUMO3P55854 AC138517.1-201ENST00000515724 568 ntBASIC5.82□□□□□ -1.48
SUMO3P55854 ZFAND1-204ENST00000517588 633 ntTSL 2 BASIC5.82□□□□□ -1.48
SUMO3P55854 PCAT1-201ENST00000519319 734 ntTSL 2 BASIC5.82□□□□□ -1.48
SUMO3P55854 ZFAND1-208ENST00000519523 698 ntTSL 2 BASIC5.82□□□□□ -1.48
SUMO3P55854 LINC01932-201ENST00000520323 573 ntTSL 5 BASIC5.82□□□□□ -1.48
SUMO3P55854 AC090802.1-201ENST00000520870 445 ntTSL 2 BASIC5.82□□□□□ -1.48
SUMO3P55854 AC079064.1-201ENST00000528365 362 ntBASIC5.82□□□□□ -1.48
SUMO3P55854 AP000756.1-201ENST00000532606 679 ntTSL 2 BASIC5.82□□□□□ -1.48
SUMO3P55854 AC022509.1-202ENST00000537525 494 ntTSL 4 BASIC5.82□□□□□ -1.48
SUMO3P55854 TPRX1P1-201ENST00000557620 319 ntBASIC5.82□□□□□ -1.48
SUMO3P55854 AC022929.1-201ENST00000560675 823 ntTSL 3 BASIC5.82□□□□□ -1.48
SUMO3P55854 AC009120.3-201ENST00000563335 499 ntBASIC5.82□□□□□ -1.48
SUMO3P55854 AC009054.1-201ENST00000568140 427 ntTSL 3 BASIC5.82□□□□□ -1.48
SUMO3P55854 C16orf97-205ENST00000568524 406 ntTSL 5 BASIC5.82□□□□□ -1.48
SUMO3P55854 RAB27A-212ENST00000569493 1013 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
SUMO3P55854 AC027455.1-201ENST00000574104 594 ntBASIC5.82□□□□□ -1.48
SUMO3P55854 AC134669.1-201ENST00000581275 672 ntBASIC5.82□□□□□ -1.48
SUMO3P55854 SS18L2P2-201ENST00000583960 235 ntBASIC5.82□□□□□ -1.48
SUMO3P55854 AC007993.3-202ENST00000585329 725 ntTSL 5 BASIC5.82□□□□□ -1.48
SUMO3P55854 AC006504.5-212ENST00000587188 746 ntTSL 3 BASIC5.82□□□□□ -1.48
SUMO3P55854 TTN-AS1-245ENST00000592182 749 ntTSL 5 BASIC5.82□□□□□ -1.48
SUMO3P55854 AC012370.2-201ENST00000597541 1080 ntTSL 5 BASIC5.82□□□□□ -1.48
SUMO3P55854 Z98949.1-210ENST00000597548 766 ntTSL 5 BASIC5.82□□□□□ -1.48
SUMO3P55854 AC011497.2-201ENST00000600255 639 ntBASIC5.82□□□□□ -1.48
SUMO3P55854 AC092070.1-201ENST00000600257 359 ntTSL 3 BASIC5.82□□□□□ -1.48
SUMO3P55854 AL357094.1-201ENST00000603845 844 ntBASIC5.82□□□□□ -1.48
SUMO3P55854 AC073046.2-201ENST00000604756 527 ntBASIC5.82□□□□□ -1.48
SUMO3P55854 AL589740.1-209ENST00000607032 1056 ntTSL 3 BASIC5.82□□□□□ -1.48
SUMO3P55854 RNU4-5P-201ENST00000607255 135 ntBASIC5.82□□□□□ -1.48
SUMO3P55854 AC073569.3-201ENST00000619055 682 ntBASIC5.82□□□□□ -1.48
SUMO3P55854 AL035461.2-201ENST00000619201 524 ntBASIC5.82□□□□□ -1.48
SUMO3P55854 MIR6811-201ENST00000620409 58 ntBASIC5.82□□□□□ -1.48
SUMO3P55854 ZNF479-203ENST00000620639 1239 ntTSL 5 BASIC5.82□□□□□ -1.48
SUMO3P55854 AC009120.7-201ENST00000623452 780 ntBASIC5.82□□□□□ -1.48
SUMO3P55854 AC245427.3-201ENST00000632041 51 ntAPPRIS P1 BASIC5.82□□□□□ -1.48
SUMO3P55854 VPS39-202ENST00000348544 2661 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
SUMO3P55854 PRICKLE1-202ENST00000445766 4075 ntAPPRIS P1 TSL 5 BASIC5.82□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 78.4 ms