Protein–RNA interactions for Protein: P55347

PKNOX1, Homeobox protein PKNOX1, humanhuman

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1P55347 LINC00383-201ENST00000433664 817 ntTSL 3 BASIC5.55□□□□□ -1.52
PKNOX1P55347 VN1R110P-201ENST00000438988 971 ntBASIC5.55□□□□□ -1.52
PKNOX1P55347 AL354793.1-201ENST00000446028 713 ntTSL 3 BASIC5.55□□□□□ -1.52
PKNOX1P55347 AC073476.1-201ENST00000452854 407 ntBASIC5.55□□□□□ -1.52
PKNOX1P55347 PPIAP27-201ENST00000453800 265 ntBASIC5.55□□□□□ -1.52
PKNOX1P55347 AC093166.4-201ENST00000457867 318 ntBASIC5.55□□□□□ -1.52
PKNOX1P55347 AC023194.2-201ENST00000465398 406 ntBASIC5.55□□□□□ -1.52
PKNOX1P55347 ATP5LP5-201ENST00000483050 299 ntBASIC5.55□□□□□ -1.52
PKNOX1P55347 RN7SL570P-201ENST00000484405 292 ntBASIC5.55□□□□□ -1.52
PKNOX1P55347 MOCS2-206ENST00000510818 1251 ntTSL 5 BASIC5.55□□□□□ -1.52
PKNOX1P55347 AC022441.2-201ENST00000514113 382 ntTSL 3 BASIC5.55□□□□□ -1.52
PKNOX1P55347 RN7SKP238-201ENST00000516483 249 ntBASIC5.55□□□□□ -1.52
PKNOX1P55347 AC100801.1-201ENST00000517368 517 ntTSL 3 BASIC5.55□□□□□ -1.52
PKNOX1P55347 AC021733.2-201ENST00000518830 497 ntBASIC5.55□□□□□ -1.52
PKNOX1P55347 CDKN3-206ENST00000541304 1070 ntTSL 2 BASIC5.55□□□□□ -1.52
PKNOX1P55347 AP000593.3-201ENST00000546065 578 ntTSL 2 BASIC5.55□□□□□ -1.52
PKNOX1P55347 MYL6-213ENST00000549017 502 ntTSL 3 BASIC5.55□□□□□ -1.52
PKNOX1P55347 AL356801.1-201ENST00000559320 294 ntBASIC5.55□□□□□ -1.52
PKNOX1P55347 AGGF1P7-201ENST00000562369 913 ntBASIC5.55□□□□□ -1.52
PKNOX1P55347 AC096996.1-201ENST00000563813 325 ntBASIC5.55□□□□□ -1.52
PKNOX1P55347 LYRM1-211ENST00000569023 769 ntAPPRIS P1 TSL 3 BASIC5.55□□□□□ -1.52
PKNOX1P55347 DHFRP1-201ENST00000579682 559 ntBASIC5.55□□□□□ -1.52
PKNOX1P55347 LINC01906-201ENST00000582962 499 ntTSL 4 BASIC5.55□□□□□ -1.52
PKNOX1P55347 MOCS2-210ENST00000584946 736 ntTSL 5 BASIC5.55□□□□□ -1.52
PKNOX1P55347 SNHG8-202ENST00000602483 309 ntTSL 3 BASIC5.55□□□□□ -1.52
PKNOX1P55347 AP001437.1-201ENST00000608783 456 ntBASIC5.55□□□□□ -1.52
PKNOX1P55347 CASC19-274ENST00000642018 970 ntBASIC5.55□□□□□ -1.52
PKNOX1P55347 CTAGE5-219ENST00000640607 4239 ntAPPRIS P5 TSL 1 (best) BASIC5.55□□□□□ -1.52
PKNOX1P55347 CACNB4-221ENST00000636130 7748 ntTSL 5 BASIC5.55□□□□□ -1.52
PKNOX1P55347 MEIOB-205ENST00000470044 1857 ntTSL 2 BASIC5.55□□□□□ -1.52
PKNOX1P55347 OR4F13P-202ENST00000560066 2054 ntBASIC5.55□□□□□ -1.52
PKNOX1P55347 CD226-201ENST00000280200 12319 ntAPPRIS P2 TSL 1 (best) BASIC5.55□□□□□ -1.52
PKNOX1P55347 AC012078.1-201ENST00000405035 1646 ntBASIC5.55□□□□□ -1.52
PKNOX1P55347 EPS8-207ENST00000540613 2204 ntTSL 2 BASIC5.55□□□□□ -1.52
PKNOX1P55347 PTPRD-205ENST00000397611 8242 ntTSL 5 BASIC5.55□□□□□ -1.52
PKNOX1P55347 PTPRD-213ENST00000537002 8224 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
PKNOX1P55347 ZNF215-205ENST00000529903 1396 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
PKNOX1P55347 LINC00032-203ENST00000640247 1374 ntTSL 5 BASIC5.55□□□□□ -1.52
PKNOX1P55347 DST-220ENST00000518935 3547 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
PKNOX1P55347 VSNL1-203ENST00000406397 2725 ntAPPRIS P1 TSL 5 BASIC5.54□□□□□ -1.52
PKNOX1P55347 GHR-211ENST00000618088 4491 ntAPPRIS P1 TSL 5 BASIC5.54□□□□□ -1.52
PKNOX1P55347 AC008695.1-201ENST00000514667 6393 ntAPPRIS P1 TSL 2 BASIC5.54□□□□□ -1.52
PKNOX1P55347 LIMA1-212ENST00000552491 2652 ntAPPRIS ALT2 TSL 2 BASIC5.54□□□□□ -1.52
PKNOX1P55347 MAMDC2-AS1-201ENST00000377178 1504 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
PKNOX1P55347 SPATA5-201ENST00000274008 8137 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
PKNOX1P55347 CCAR1-217ENST00000543719 3521 ntTSL 5 BASIC5.54□□□□□ -1.52
PKNOX1P55347 LRRC8B-201ENST00000330947 7593 ntAPPRIS P1 TSL 5 BASIC5.54□□□□□ -1.52
PKNOX1P55347 ZFX-211ENST00000539115 6801 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
PKNOX1P55347 AC104966.1-201ENST00000467010 1464 ntBASIC5.54□□□□□ -1.52
PKNOX1P55347 AL353751.1-201ENST00000354541 495 ntTSL 3 BASIC5.54□□□□□ -1.52
PKNOX1P55347 USMG5-203ENST00000369811 635 ntAPPRIS P1 TSL 2 BASIC5.54□□□□□ -1.52
PKNOX1P55347 RNA5SP187-201ENST00000384400 119 ntBASIC5.54□□□□□ -1.52
PKNOX1P55347 TRAJ38-201ENST00000390499 62 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
PKNOX1P55347 HSD17B7P1-201ENST00000412419 1017 ntBASIC5.54□□□□□ -1.52
PKNOX1P55347 AL357752.1-201ENST00000412817 349 ntBASIC5.54□□□□□ -1.52
PKNOX1P55347 NIFKP3-201ENST00000417799 865 ntBASIC5.54□□□□□ -1.52
PKNOX1P55347 BX284632.2-201ENST00000421091 399 ntBASIC5.54□□□□□ -1.52
PKNOX1P55347 AC073283.2-202ENST00000426892 591 ntTSL 4 BASIC5.54□□□□□ -1.52
PKNOX1P55347 VTCN1-204ENST00000430871 569 ntTSL 5 BASIC5.54□□□□□ -1.52
PKNOX1P55347 CA1-201ENST00000431316 1232 ntAPPRIS P1 TSL 5 BASIC5.54□□□□□ -1.52
PKNOX1P55347 ATP5LP2-201ENST00000440646 311 ntBASIC5.54□□□□□ -1.52
PKNOX1P55347 AL512605.1-202ENST00000441919 381 ntBASIC5.54□□□□□ -1.52
PKNOX1P55347 MEOX2-AS1-201ENST00000442176 697 ntTSL 3 BASIC5.54□□□□□ -1.52
PKNOX1P55347 LINC02210-201ENST00000444561 288 ntBASIC5.54□□□□□ -1.52
PKNOX1P55347 CASP5-205ENST00000444749 1237 ntAPPRIS P1 TSL 2 BASIC5.54□□□□□ -1.52
PKNOX1P55347 AL359955.2-201ENST00000445380 353 ntBASIC5.54□□□□□ -1.52
PKNOX1P55347 AC139720.1-201ENST00000509497 512 ntTSL 3 BASIC5.54□□□□□ -1.52
PKNOX1P55347 AC018680.1-201ENST00000513332 875 ntTSL 3 BASIC5.54□□□□□ -1.52
PKNOX1P55347 AC139365.2-201ENST00000517972 253 ntBASIC5.54□□□□□ -1.52
PKNOX1P55347 AC027117.1-201ENST00000520646 667 ntTSL 5 BASIC5.54□□□□□ -1.52
PKNOX1P55347 CASP5-209ENST00000531367 879 ntTSL 5 BASIC5.54□□□□□ -1.52
PKNOX1P55347 AP004609.2-201ENST00000532177 190 ntBASIC5.54□□□□□ -1.52
PKNOX1P55347 PCNAP4-201ENST00000532690 730 ntBASIC5.54□□□□□ -1.52
PKNOX1P55347 OR4A43P-201ENST00000532938 908 ntBASIC5.54□□□□□ -1.52
PKNOX1P55347 MALAT1-203ENST00000544868 480 ntTSL 3 BASIC5.54□□□□□ -1.52
PKNOX1P55347 LINC02392-201ENST00000548172 537 ntTSL 4 BASIC5.54□□□□□ -1.52
PKNOX1P55347 AC006530.1-201ENST00000555980 571 ntBASIC5.54□□□□□ -1.52
PKNOX1P55347 ARGFXP2-201ENST00000579304 949 ntBASIC5.54□□□□□ -1.52
PKNOX1P55347 AC138035.1-202ENST00000604669 683 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
PKNOX1P55347 AC090607.5-201ENST00000615692 224 ntBASIC5.54□□□□□ -1.52
PKNOX1P55347 MALAT1-217ENST00000620902 352 ntTSL 3 BASIC5.54□□□□□ -1.52
PKNOX1P55347 AC010809.3-201ENST00000621310 641 ntBASIC5.54□□□□□ -1.52
PKNOX1P55347 MIR6813-201ENST00000621638 56 ntBASIC5.54□□□□□ -1.52
PKNOX1P55347 AL592430.2-201ENST00000633779 486 ntTSL 5 BASIC5.54□□□□□ -1.52
PKNOX1P55347 AC092329.4-204ENST00000639327 549 ntTSL 4 BASIC5.54□□□□□ -1.52
PKNOX1P55347 LINC00615-201ENST00000546725 1406 ntTSL 2 BASIC5.54□□□□□ -1.52
PKNOX1P55347 SPARCL1-202ENST00000418378 2994 ntAPPRIS P1 TSL 5 BASIC5.54□□□□□ -1.52
PKNOX1P55347 AC083899.1-201ENST00000454465 3819 ntBASIC5.54□□□□□ -1.52
PKNOX1P55347 SLC26A5-207ENST00000393729 2422 ntTSL 5 BASIC5.54□□□□□ -1.52
PKNOX1P55347 USF3-202ENST00000478658 8461 ntAPPRIS P2 TSL 5 BASIC5.54□□□□□ -1.52
PKNOX1P55347 FGL1-209ENST00000522444 1367 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
PKNOX1P55347 C1orf27-201ENST00000287859 3792 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
PKNOX1P55347 NKAIN2-204ENST00000545433 3052 ntTSL 5 BASIC5.54□□□□□ -1.52
PKNOX1P55347 NDUFA5-207ENST00000471770 5608 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
PKNOX1P55347 C11orf54-206ENST00000528099 1862 ntAPPRIS P1 TSL 2 BASIC5.54□□□□□ -1.52
PKNOX1P55347 RBM5-214ENST00000469838 2716 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
PKNOX1P55347 ANK3-216ENST00000503366 5792 ntAPPRIS ALT2 TSL 2 BASIC5.53□□□□□ -1.52
PKNOX1P55347 DNAH5-201ENST00000265104 15633 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
PKNOX1P55347 UNC80-203ENST00000439458 13562 ntAPPRIS P1 TSL 5 BASIC5.53□□□□□ -1.52
PKNOX1P55347 AC006145.1-201ENST00000439234 2651 ntTSL 2 BASIC5.53□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 101.6 ms