Protein–RNA interactions for Protein: P54753

EPHB3, Ephrin type-B receptor 3, humanhuman

Predictions only

Length 998 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB3P54753 OR1N1-202ENST00000619659 939 ntBASIC6.82□□□□□ -1.32
EPHB3P54753 MIR8089-201ENST00000620165 82 ntBASIC6.82□□□□□ -1.32
EPHB3P54753 AP001264.1-201ENST00000620602 703 ntBASIC6.82□□□□□ -1.32
EPHB3P54753 RNU6-368P-201ENST00000620928 107 ntBASIC6.82□□□□□ -1.32
EPHB3P54753 RNU6-538P-201ENST00000622329 107 ntBASIC6.82□□□□□ -1.32
EPHB3P54753 DLG2-209ENST00000418306 3027 ntTSL 2 BASIC6.82□□□□□ -1.32
EPHB3P54753 FOCAD-216ENST00000605086 4195 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
EPHB3P54753 MYBPC1-223ENST00000553190 3777 ntAPPRIS ALT2 TSL 1 (best) BASIC6.82□□□□□ -1.32
EPHB3P54753 OR7D2-203ENST00000642043 3157 ntAPPRIS P1 BASIC6.82□□□□□ -1.32
EPHB3P54753 IFIT1P1-201ENST00000400497 1449 ntBASIC6.82□□□□□ -1.32
EPHB3P54753 ZNF426-202ENST00000535489 2375 ntAPPRIS P3 TSL 1 (best) BASIC6.82□□□□□ -1.32
EPHB3P54753 ZNF107-201ENST00000344930 5174 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
EPHB3P54753 VTCN1-207ENST00000539893 2719 ntTSL 2 BASIC6.82□□□□□ -1.32
EPHB3P54753 CPNE4-208ENST00000511604 2503 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
EPHB3P54753 TET1P1-201ENST00000426627 2301 ntBASIC6.82□□□□□ -1.32
EPHB3P54753 BDNF-AS-201ENST00000499008 2324 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
EPHB3P54753 RASGRF1-201ENST00000394745 2850 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
EPHB3P54753 HMBOX1-206ENST00000519047 1551 ntTSL 5 BASIC6.82□□□□□ -1.32
EPHB3P54753 AC007491.1-202ENST00000637961 1576 ntTSL 5 BASIC6.82□□□□□ -1.32
EPHB3P54753 CFI-205ENST00000512148 1914 ntAPPRIS ALT2 TSL 5 BASIC6.82□□□□□ -1.32
EPHB3P54753 TAS2R20-201ENST00000538986 1381 ntAPPRIS P1 BASIC6.82□□□□□ -1.32
EPHB3P54753 HEPH-203ENST00000419594 3694 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
EPHB3P54753 NOX4-211ENST00000528341 1899 ntTSL 2 BASIC6.81□□□□□ -1.32
EPHB3P54753 SPANXN5-201ENST00000375511 1316 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
EPHB3P54753 CMAHP-202ENST00000377993 1681 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
EPHB3P54753 CASC19-228ENST00000641414 1684 ntBASIC6.81□□□□□ -1.32
EPHB3P54753 AKAP17BP-201ENST00000431706 2719 ntBASIC6.81□□□□□ -1.32
EPHB3P54753 AC107884.1-202ENST00000622955 2703 ntTSL 5 BASIC6.81□□□□□ -1.32
EPHB3P54753 TCP1P3-201ENST00000414406 1498 ntBASIC6.81□□□□□ -1.32
EPHB3P54753 SRSF3-202ENST00000373715 4222 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
EPHB3P54753 ASNSP6-201ENST00000592770 1618 ntBASIC6.81□□□□□ -1.32
EPHB3P54753 Y_RNA.62-201ENST00000362840 99 ntBASIC6.81□□□□□ -1.32
EPHB3P54753 RNA5SP433-201ENST00000364491 114 ntBASIC6.81□□□□□ -1.32
EPHB3P54753 PKIB-203ENST00000368446 556 ntTSL 2 BASIC6.81□□□□□ -1.32
EPHB3P54753 AC117402.1-202ENST00000383686 820 ntTSL 2 BASIC6.81□□□□□ -1.32
EPHB3P54753 POLR1D-202ENST00000399696 668 ntAPPRIS ALT1 TSL 5 BASIC6.81□□□□□ -1.32
EPHB3P54753 NUDT19P3-201ENST00000404698 555 ntBASIC6.81□□□□□ -1.32
EPHB3P54753 AL139805.1-201ENST00000407837 289 ntBASIC6.81□□□□□ -1.32
EPHB3P54753 RN7SKP278-201ENST00000410504 342 ntBASIC6.81□□□□□ -1.32
EPHB3P54753 AL445213.1-201ENST00000412589 747 ntBASIC6.81□□□□□ -1.32
EPHB3P54753 AL365184.1-201ENST00000413801 572 ntTSL 3 BASIC6.81□□□□□ -1.32
EPHB3P54753 NUTM2A-AS1-203ENST00000413961 501 ntTSL 3 BASIC6.81□□□□□ -1.32
EPHB3P54753 UBE2V1P10-201ENST00000414685 269 ntBASIC6.81□□□□□ -1.32
EPHB3P54753 AL158834.2-201ENST00000415731 696 ntTSL 2 BASIC6.81□□□□□ -1.32
EPHB3P54753 AL158050.1-201ENST00000416077 457 ntBASIC6.81□□□□□ -1.32
EPHB3P54753 VNN3-205ENST00000417437 1117 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
EPHB3P54753 RPL23AP85-201ENST00000421838 433 ntBASIC6.81□□□□□ -1.32
EPHB3P54753 LINC01435-201ENST00000425050 722 ntTSL 3 BASIC6.81□□□□□ -1.32
EPHB3P54753 LINC01878-201ENST00000434559 769 ntTSL 3 BASIC6.81□□□□□ -1.32
EPHB3P54753 AC007179.2-206ENST00000434611 467 ntTSL 3 BASIC6.81□□□□□ -1.32
EPHB3P54753 AF127577.2-201ENST00000436429 824 ntTSL 3 BASIC6.81□□□□□ -1.32
EPHB3P54753 FABP5P3-201ENST00000437960 408 ntBASIC6.81□□□□□ -1.32
EPHB3P54753 ARF4P4-201ENST00000439608 520 ntBASIC6.81□□□□□ -1.32
EPHB3P54753 RPL12P11-201ENST00000439970 501 ntBASIC6.81□□□□□ -1.32
EPHB3P54753 XXYLT1-AS2-202ENST00000447975 784 ntTSL 2 BASIC6.81□□□□□ -1.32
EPHB3P54753 OR52J1P-201ENST00000450596 932 ntBASIC6.81□□□□□ -1.32
EPHB3P54753 RPS17P11-201ENST00000474297 293 ntBASIC6.81□□□□□ -1.32
EPHB3P54753 AP002884.1-201ENST00000479691 655 ntBASIC6.81□□□□□ -1.32
EPHB3P54753 RPS3AP43-201ENST00000479743 781 ntBASIC6.81□□□□□ -1.32
EPHB3P54753 AC090543.1-201ENST00000492168 485 ntBASIC6.81□□□□□ -1.32
EPHB3P54753 AC096746.1-201ENST00000501965 1042 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
EPHB3P54753 AC083906.1-201ENST00000509298 406 ntBASIC6.81□□□□□ -1.32
EPHB3P54753 AC008549.1-201ENST00000512900 643 ntBASIC6.81□□□□□ -1.32
EPHB3P54753 AC087360.1-201ENST00000518788 616 ntBASIC6.81□□□□□ -1.32
EPHB3P54753 ODF1-202ENST00000518835 368 ntTSL 3 BASIC6.81□□□□□ -1.32
EPHB3P54753 SUMO2P19-201ENST00000518920 295 ntBASIC6.81□□□□□ -1.32
EPHB3P54753 AC008662.1-201ENST00000521805 674 ntTSL 3 BASIC6.81□□□□□ -1.32
EPHB3P54753 OR56A7P-201ENST00000524865 941 ntBASIC6.81□□□□□ -1.32
EPHB3P54753 COPZ1-205ENST00000548753 778 ntTSL 3 BASIC6.81□□□□□ -1.32
EPHB3P54753 AC020612.3-201ENST00000550644 570 ntTSL 2 BASIC6.81□□□□□ -1.32
EPHB3P54753 AL157871.6-201ENST00000553954 206 ntTSL 2 BASIC6.81□□□□□ -1.32
EPHB3P54753 AL133371.1-201ENST00000555481 764 ntTSL 2 BASIC6.81□□□□□ -1.32
EPHB3P54753 AC092134.1-201ENST00000563690 800 ntTSL 3 BASIC6.81□□□□□ -1.32
EPHB3P54753 AC007346.2-201ENST00000564816 892 ntBASIC6.81□□□□□ -1.32
EPHB3P54753 AL035071.2-201ENST00000565572 459 ntTSL 3 BASIC6.81□□□□□ -1.32
EPHB3P54753 AP001496.3-201ENST00000580230 913 ntBASIC6.81□□□□□ -1.32
EPHB3P54753 AP001011.1-201ENST00000583546 690 ntTSL 3 BASIC6.81□□□□□ -1.32
EPHB3P54753 AC090415.2-201ENST00000584078 374 ntTSL 3 BASIC6.81□□□□□ -1.32
EPHB3P54753 LINC00663-202ENST00000586816 306 ntTSL 2 BASIC6.81□□□□□ -1.32
EPHB3P54753 ZNF682-208ENST00000596019 552 ntTSL 5 BASIC6.81□□□□□ -1.32
EPHB3P54753 AC099785.1-201ENST00000605697 437 ntBASIC6.81□□□□□ -1.32
EPHB3P54753 AC092106.3-201ENST00000611308 722 ntBASIC6.81□□□□□ -1.32
EPHB3P54753 ZNHIT3-208ENST00000619730 926 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
EPHB3P54753 GPR34-203ENST00000620846 1282 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
EPHB3P54753 TTN-AS1-267ENST00000628826 662 ntTSL 5 BASIC6.81□□□□□ -1.32
EPHB3P54753 PRKCH-228ENST00000640011 285 ntTSL 5 BASIC6.81□□□□□ -1.32
EPHB3P54753 EIF2A-202ENST00000406576 1795 ntTSL 2 BASIC6.81□□□□□ -1.32
EPHB3P54753 AC004690.2-201ENST00000472838 1754 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
EPHB3P54753 AC008040.1-202ENST00000483289 6251 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
EPHB3P54753 SLC30A6-201ENST00000282587 5089 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
EPHB3P54753 AC009501.3-201ENST00000605001 1352 ntBASIC6.81□□□□□ -1.32
EPHB3P54753 CASC19-255ENST00000641733 1385 ntBASIC6.81□□□□□ -1.32
EPHB3P54753 RTL9-203ENST00000540313 5225 ntAPPRIS P2 TSL 2 BASIC6.81□□□□□ -1.32
EPHB3P54753 EIF1-203ENST00000469257 2330 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
EPHB3P54753 METTL21EP-202ENST00000605100 2312 ntTSL 2 BASIC6.81□□□□□ -1.32
EPHB3P54753 MEIOC-202ENST00000409464 4067 ntAPPRIS ALT2 TSL 2 BASIC6.81□□□□□ -1.32
EPHB3P54753 DAZ3-202ENST00000382365 3503 ntAPPRIS P5 TSL 1 (best) BASIC6.8□□□□□ -1.32
EPHB3P54753 NEK2P4-201ENST00000425793 1329 ntBASIC6.8□□□□□ -1.32
EPHB3P54753 AL512310.3-201ENST00000547023 1335 ntBASIC6.8□□□□□ -1.32
EPHB3P54753 EOGT-201ENST00000295571 4138 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
Retrieved 100 of 98,524 protein–RNA pairs in 275.1 ms