Protein–RNA interactions for Protein: P53667

LIMK1, LIM domain kinase 1, humanhuman

Predictions only

Length 647 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1P53667 MIR1286-201ENST00000408112 78 ntBASIC6.01□□□□□ -1.45
LIMK1P53667 GAS5-202ENST00000414075 413 ntTSL 2 BASIC6.01□□□□□ -1.45
LIMK1P53667 RPS26P38-201ENST00000414476 348 ntBASIC6.01□□□□□ -1.45
LIMK1P53667 LINC01820-201ENST00000418415 570 ntTSL 2 BASIC6.01□□□□□ -1.45
LIMK1P53667 PPP2R2DP1-201ENST00000420526 637 ntBASIC6.01□□□□□ -1.45
LIMK1P53667 AC021876.1-201ENST00000425959 359 ntBASIC6.01□□□□□ -1.45
LIMK1P53667 AL355390.2-201ENST00000446691 880 ntTSL 5 BASIC6.01□□□□□ -1.45
LIMK1P53667 AL445466.1-201ENST00000448432 357 ntBASIC6.01□□□□□ -1.45
LIMK1P53667 AL035409.1-201ENST00000454305 497 ntTSL 2 BASIC6.01□□□□□ -1.45
LIMK1P53667 AC018742.1-202ENST00000457901 504 ntTSL 3 BASIC6.01□□□□□ -1.45
LIMK1P53667 AC055758.1-201ENST00000494509 569 ntTSL 3 BASIC6.01□□□□□ -1.45
LIMK1P53667 AC108941.2-201ENST00000506796 716 ntAPPRIS P1 TSL 5 BASIC6.01□□□□□ -1.45
LIMK1P53667 C5orf64-204ENST00000507461 535 ntTSL 4 BASIC6.01□□□□□ -1.45
LIMK1P53667 AC130364.2-201ENST00000528639 604 ntBASIC6.01□□□□□ -1.45
LIMK1P53667 EIF1AXP2-201ENST00000555940 413 ntBASIC6.01□□□□□ -1.45
LIMK1P53667 AL356801.1-201ENST00000559320 294 ntBASIC6.01□□□□□ -1.45
LIMK1P53667 AL136311.1-213ENST00000586466 520 ntTSL 5 BASIC6.01□□□□□ -1.45
LIMK1P53667 AL356608.1-201ENST00000610034 820 ntBASIC6.01□□□□□ -1.45
LIMK1P53667 U1.25-201ENST00000614085 162 ntBASIC6.01□□□□□ -1.45
LIMK1P53667 ZNF248-209ENST00000615949 518 ntTSL 5 BASIC6.01□□□□□ -1.45
LIMK1P53667 AL442125.2-201ENST00000619338 418 ntTSL 5 BASIC6.01□□□□□ -1.45
LIMK1P53667 U1.31-201ENST00000620022 160 ntBASIC6.01□□□□□ -1.45
LIMK1P53667 DAOA-212ENST00000640578 378 ntAPPRIS ALT2 TSL 5 BASIC6.01□□□□□ -1.45
LIMK1P53667 UNC79-203ENST00000553484 9100 ntTSL 5 BASIC6.01□□□□□ -1.45
LIMK1P53667 MTCO1P22-201ENST00000604619 1360 ntBASIC6.01□□□□□ -1.45
LIMK1P53667 AC007342.9-201ENST00000623877 1385 ntBASIC6.01□□□□□ -1.45
LIMK1P53667 TOP2B-201ENST00000264331 5358 ntAPPRIS ALT2 TSL 5 BASIC6.01□□□□□ -1.45
LIMK1P53667 ELMO1-207ENST00000442504 3154 ntAPPRIS P1 TSL 2 BASIC6.01□□□□□ -1.45
LIMK1P53667 KRT39-201ENST00000355612 1696 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
LIMK1P53667 LCP2-201ENST00000046794 4678 ntAPPRIS P2 TSL 1 (best) BASIC6.01□□□□□ -1.45
LIMK1P53667 SMARCA2-201ENST00000302401 2242 ntTSL 2 BASIC6.01□□□□□ -1.45
LIMK1P53667 GIGYF2-246ENST00000629305 7878 ntTSL 5 BASIC6.01□□□□□ -1.45
LIMK1P53667 GRAMD1C-208ENST00000472026 1876 ntTSL 2 BASIC6□□□□□ -1.45
LIMK1P53667 OR2M3-202ENST00000641626 9913 ntAPPRIS P1 BASIC6□□□□□ -1.45
LIMK1P53667 CPEB4-202ENST00000334035 6705 ntTSL 1 (best) BASIC6□□□□□ -1.45
LIMK1P53667 NHS-202ENST00000398097 8213 ntTSL 1 (best) BASIC6□□□□□ -1.45
LIMK1P53667 LCA5L-203ENST00000380671 2080 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
LIMK1P53667 LINC02086-202ENST00000492522 2091 ntTSL 5 BASIC6□□□□□ -1.45
LIMK1P53667 GPN1-205ENST00000458167 1618 ntTSL 2 BASIC6□□□□□ -1.45
LIMK1P53667 RABL3-201ENST00000273375 3883 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
LIMK1P53667 LINC01748-203ENST00000634836 3229 ntTSL 5 BASIC6□□□□□ -1.45
LIMK1P53667 ESRRG-203ENST00000361395 5216 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
LIMK1P53667 ESRRG-209ENST00000408911 5216 ntTSL 1 (best) BASIC6□□□□□ -1.45
LIMK1P53667 MYO3B-203ENST00000409044 5448 ntAPPRIS ALT2 TSL 1 (best) BASIC6□□□□□ -1.45
LIMK1P53667 FAM32BP-201ENST00000344033 333 ntBASIC6□□□□□ -1.45
LIMK1P53667 RN7SKP115-201ENST00000363177 317 ntBASIC6□□□□□ -1.45
LIMK1P53667 DAOA-202ENST00000375936 742 ntAPPRIS P3 TSL 1 (best) BASIC6□□□□□ -1.45
LIMK1P53667 RNU1-46P-201ENST00000384425 164 ntBASIC6□□□□□ -1.45
LIMK1P53667 AL354890.1-201ENST00000413730 346 ntBASIC6□□□□□ -1.45
LIMK1P53667 AC084816.1-201ENST00000413794 565 ntTSL 4 BASIC6□□□□□ -1.45
LIMK1P53667 AL139415.1-201ENST00000424862 352 ntBASIC6□□□□□ -1.45
LIMK1P53667 AC007422.1-201ENST00000433065 1008 ntTSL 5 BASIC6□□□□□ -1.45
LIMK1P53667 AC006482.1-201ENST00000448898 273 ntTSL 3 BASIC6□□□□□ -1.45
LIMK1P53667 AC104831.1-201ENST00000470024 444 ntTSL 3 BASIC6□□□□□ -1.45
LIMK1P53667 SH3GLB1-202ENST00000482504 1199 ntTSL 1 (best) BASIC6□□□□□ -1.45
LIMK1P53667 AC138866.2-201ENST00000508650 584 ntBASIC6□□□□□ -1.45
LIMK1P53667 AC021146.10-201ENST00000515628 706 ntBASIC6□□□□□ -1.45
LIMK1P53667 IGKV1D-22-201ENST00000518953 324 ntBASIC6□□□□□ -1.45
LIMK1P53667 AL158058.1-201ENST00000549515 647 ntTSL 2 BASIC6□□□□□ -1.45
LIMK1P53667 RGS6-215ENST00000554782 1110 ntTSL 1 (best) BASIC6□□□□□ -1.45
LIMK1P53667 HNRNPCP1-201ENST00000556181 766 ntBASIC6□□□□□ -1.45
LIMK1P53667 AC040977.1-201ENST00000573222 343 ntTSL 3 BASIC6□□□□□ -1.45
LIMK1P53667 AC006504.7-201ENST00000592806 924 ntTSL 3 BASIC6□□□□□ -1.45
LIMK1P53667 VN1R81P-201ENST00000602085 372 ntBASIC6□□□□□ -1.45
LIMK1P53667 GMFG-212ENST00000602185 423 ntTSL 3 BASIC6□□□□□ -1.45
LIMK1P53667 AL645933.2-201ENST00000606743 1207 ntBASIC6□□□□□ -1.45
LIMK1P53667 AL445465.1-206ENST00000609544 528 ntTSL 5 BASIC6□□□□□ -1.45
LIMK1P53667 AP000904.1-201ENST00000609911 951 ntTSL 3 BASIC6□□□□□ -1.45
LIMK1P53667 AL031658.2-201ENST00000616850 651 ntBASIC6□□□□□ -1.45
LIMK1P53667 AL445670.1-201ENST00000618889 801 ntBASIC6□□□□□ -1.45
LIMK1P53667 AC021766.1-201ENST00000624404 741 ntBASIC6□□□□□ -1.45
LIMK1P53667 OR8G5-202ENST00000641707 1156 ntAPPRIS P1 BASIC6□□□□□ -1.45
LIMK1P53667 EEF1A1P14-201ENST00000421195 1376 ntBASIC6□□□□□ -1.45
LIMK1P53667 AC010127.1-209ENST00000447809 2305 ntTSL 1 (best) BASIC6□□□□□ -1.45
LIMK1P53667 OR6N2-202ENST00000641131 3455 ntAPPRIS P1 BASIC6□□□□□ -1.45
LIMK1P53667 MDM4-217ENST00000621032 5592 ntTSL 2 BASIC6□□□□□ -1.45
LIMK1P53667 AC232271.1-201ENST00000602455 2715 ntBASIC6□□□□□ -1.45
LIMK1P53667 PGM3-215ENST00000616566 5905 ntTSL 2 BASIC6□□□□□ -1.45
LIMK1P53667 GNL2P1-201ENST00000451274 2190 ntBASIC6□□□□□ -1.45
LIMK1P53667 NHS-205ENST00000617601 8163 ntTSL 1 (best) BASIC6□□□□□ -1.45
LIMK1P53667 POLR2B-202ENST00000381227 4108 ntAPPRIS P1 TSL 5 BASIC6□□□□□ -1.45
LIMK1P53667 MRE11-204ENST00000407439 2684 ntTSL 2 BASIC6□□□□□ -1.45
LIMK1P53667 SLCO1C1-208ENST00000545102 2868 ntTSL 2 BASIC6□□□□□ -1.45
LIMK1P53667 POLR1A-201ENST00000263857 12749 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
LIMK1P53667 IQCA1-202ENST00000309507 3155 ntAPPRIS ALT2 TSL 2 BASIC6□□□□□ -1.45
LIMK1P53667 CEACAM1-203ENST00000352591 3170 ntTSL 1 (best) BASIC6□□□□□ -1.45
LIMK1P53667 LUZP2-201ENST00000336930 3553 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
LIMK1P53667 MYBPC1-223ENST00000553190 3777 ntAPPRIS ALT2 TSL 1 (best) BASIC6□□□□□ -1.45
LIMK1P53667 NEK2P2-201ENST00000438441 1338 ntBASIC5.99□□□□□ -1.45
LIMK1P53667 MTCO1P8-201ENST00000416914 1523 ntBASIC5.99□□□□□ -1.45
LIMK1P53667 HYAL4-202ENST00000476325 1616 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
LIMK1P53667 FIRRE-202ENST00000637577 1635 ntTSL 5 BASIC5.99□□□□□ -1.45
LIMK1P53667 CLRN1-AS1-201ENST00000465576 2045 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
LIMK1P53667 AC011815.2-201ENST00000618230 2021 ntBASIC5.99□□□□□ -1.45
LIMK1P53667 MEPE-209ENST00000560249 2206 ntAPPRIS ALT2 TSL 1 (best) BASIC5.99□□□□□ -1.45
LIMK1P53667 AC005480.1-202ENST00000555916 3548 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
LIMK1P53667 MTPAP-201ENST00000263063 5601 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
LIMK1P53667 MMRN1-201ENST00000264790 4967 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
LIMK1P53667 ZC3H14-205ENST00000393514 2195 ntTSL 5 BASIC5.99□□□□□ -1.45
LIMK1P53667 FAR2-201ENST00000182377 2095 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 76 ms