Protein–RNA interactions for Protein: P53618

COPB1, Coatomer subunit beta, humanhuman

Known RBP Predictions only

Length 953 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1P53618 AP002453.1-201ENST00000492327 668 ntBASIC6.42□□□□□ -1.38
COPB1P53618 RPL37P23-201ENST00000492641 294 ntBASIC6.42□□□□□ -1.38
COPB1P53618 AC104779.1-201ENST00000503557 441 ntTSL 3 BASIC6.42□□□□□ -1.38
COPB1P53618 AC011405.1-202ENST00000504658 803 ntTSL 3 BASIC6.42□□□□□ -1.38
COPB1P53618 AC130364.2-201ENST00000528639 604 ntBASIC6.42□□□□□ -1.38
COPB1P53618 LINC02406-201ENST00000553029 546 ntTSL 3 BASIC6.42□□□□□ -1.38
COPB1P53618 AC090888.3-201ENST00000558917 509 ntBASIC6.42□□□□□ -1.38
COPB1P53618 NDUFA5P11-201ENST00000567995 343 ntBASIC6.42□□□□□ -1.38
COPB1P53618 AC010401.2-202ENST00000570663 396 ntTSL 2 BASIC6.42□□□□□ -1.38
COPB1P53618 AC005856.1-201ENST00000585921 286 ntTSL 3 BASIC6.42□□□□□ -1.38
COPB1P53618 AL589935.1-223ENST00000587015 808 ntTSL 5 BASIC6.42□□□□□ -1.38
COPB1P53618 CT45A1-202ENST00000594565 1007 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
COPB1P53618 AP2S1-210ENST00000601649 315 ntTSL 3 BASIC6.42□□□□□ -1.38
COPB1P53618 AC117490.2-201ENST00000610042 594 ntBASIC6.42□□□□□ -1.38
COPB1P53618 OSTC-205ENST00000613215 876 ntTSL 2 BASIC6.42□□□□□ -1.38
COPB1P53618 AL021918.2-201ENST00000613415 194 ntBASIC6.42□□□□□ -1.38
COPB1P53618 AL162233.1-201ENST00000620014 944 ntBASIC6.42□□□□□ -1.38
COPB1P53618 AL683826.1-201ENST00000624104 627 ntBASIC6.42□□□□□ -1.38
COPB1P53618 AL161457.2-201ENST00000629181 630 ntTSL 5 BASIC6.42□□□□□ -1.38
COPB1P53618 AC073488.6-201ENST00000632293 754 ntBASIC6.42□□□□□ -1.38
COPB1P53618 ANK2-226ENST00000612754 6134 ntTSL 5 BASIC6.42□□□□□ -1.38
COPB1P53618 CUBN-202ENST00000377833 11949 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
COPB1P53618 PAPD4-203ENST00000428308 2204 ntAPPRIS P3 TSL 2 BASIC6.42□□□□□ -1.38
COPB1P53618 PDE4D-202ENST00000317118 2599 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
COPB1P53618 ATXN2-202ENST00000389153 3854 ntAPPRIS ALT2 TSL 5 BASIC6.42□□□□□ -1.38
COPB1P53618 RBPJP7-201ENST00000442803 1447 ntBASIC6.42□□□□□ -1.38
COPB1P53618 RBPJP5-201ENST00000449433 1447 ntBASIC6.42□□□□□ -1.38
COPB1P53618 SLC16A6-201ENST00000327268 3807 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
COPB1P53618 AC018628.1-201ENST00000624147 3819 ntBASIC6.41□□□□□ -1.38
COPB1P53618 DSC3-201ENST00000360428 6939 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
COPB1P53618 AC068446.1-201ENST00000556425 1549 ntBASIC6.41□□□□□ -1.38
COPB1P53618 GTDC1-207ENST00000409298 2209 ntTSL 5 BASIC6.41□□□□□ -1.38
COPB1P53618 LGALSL-202ENST00000409537 3298 ntTSL 5 BASIC6.41□□□□□ -1.38
COPB1P53618 PEX5L-202ENST00000392649 8540 ntAPPRIS ALT2 TSL 5 BASIC6.41□□□□□ -1.38
COPB1P53618 LINC01958-201ENST00000637749 1941 ntTSL 5 BASIC6.41□□□□□ -1.38
COPB1P53618 LRRC37A3-202ENST00000334962 2654 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
COPB1P53618 YAF2-202ENST00000380790 1211 ntTSL 2 BASIC6.41□□□□□ -1.38
COPB1P53618 RPL11P3-201ENST00000395256 523 ntBASIC6.41□□□□□ -1.38
COPB1P53618 RNU6-564P-201ENST00000410983 104 ntBASIC6.41□□□□□ -1.38
COPB1P53618 AL357078.2-201ENST00000416486 427 ntBASIC6.41□□□□□ -1.38
COPB1P53618 AC099782.1-201ENST00000425889 474 ntBASIC6.41□□□□□ -1.38
COPB1P53618 AL162385.2-201ENST00000437864 285 ntTSL 3 BASIC6.41□□□□□ -1.38
COPB1P53618 AC009963.4-201ENST00000448535 339 ntBASIC6.41□□□□□ -1.38
COPB1P53618 AC107072.1-201ENST00000449007 110 ntTSL 3 BASIC6.41□□□□□ -1.38
COPB1P53618 AL353718.1-201ENST00000451028 517 ntBASIC6.41□□□□□ -1.38
COPB1P53618 Z83838.1-202ENST00000456225 839 ntBASIC6.41□□□□□ -1.38
COPB1P53618 AC096639.1-201ENST00000456240 347 ntTSL 5 BASIC6.41□□□□□ -1.38
COPB1P53618 AP002371.1-201ENST00000463604 433 ntBASIC6.41□□□□□ -1.38
COPB1P53618 RN7SL269P-201ENST00000467795 305 ntBASIC6.41□□□□□ -1.38
COPB1P53618 AL157777.1-201ENST00000468100 304 ntBASIC6.41□□□□□ -1.38
COPB1P53618 AC023245.1-201ENST00000468501 517 ntBASIC6.41□□□□□ -1.38
COPB1P53618 AC005017.1-201ENST00000482002 490 ntBASIC6.41□□□□□ -1.38
COPB1P53618 AC080013.1-206ENST00000496842 712 ntTSL 2 BASIC6.41□□□□□ -1.38
COPB1P53618 CCDC169-211ENST00000503173 837 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
COPB1P53618 AC113367.2-201ENST00000505749 160 ntBASIC6.41□□□□□ -1.38
COPB1P53618 LINC02360-201ENST00000506195 657 ntTSL 3 BASIC6.41□□□□□ -1.38
COPB1P53618 AC097491.1-201ENST00000507857 672 ntTSL 5 BASIC6.41□□□□□ -1.38
COPB1P53618 AC239584.1-201ENST00000510419 732 ntTSL 5 BASIC6.41□□□□□ -1.38
COPB1P53618 LINC02432-203ENST00000511213 719 ntTSL 2 BASIC6.41□□□□□ -1.38
COPB1P53618 MAST4-IT1-201ENST00000514241 658 ntBASIC6.41□□□□□ -1.38
COPB1P53618 AC011853.1-201ENST00000518911 454 ntBASIC6.41□□□□□ -1.38
COPB1P53618 OR8Q1P-201ENST00000526467 655 ntBASIC6.41□□□□□ -1.38
COPB1P53618 DEFB109F-202ENST00000542600 509 ntTSL 2 BASIC6.41□□□□□ -1.38
COPB1P53618 LINC02400-201ENST00000548210 351 ntTSL 2 BASIC6.41□□□□□ -1.38
COPB1P53618 AC089998.2-201ENST00000551856 277 ntTSL 3 BASIC6.41□□□□□ -1.38
COPB1P53618 AC091544.7-201ENST00000554000 240 ntTSL 3 BASIC6.41□□□□□ -1.38
COPB1P53618 RORA-AS2-202ENST00000561413 576 ntTSL 4 BASIC6.41□□□□□ -1.38
COPB1P53618 AC007346.1-201ENST00000569208 867 ntBASIC6.41□□□□□ -1.38
COPB1P53618 LINC01533-204ENST00000590719 435 ntTSL 5 BASIC6.41□□□□□ -1.38
COPB1P53618 LINC01435-212ENST00000601212 742 ntTSL 5 BASIC6.41□□□□□ -1.38
COPB1P53618 uc_338.29-201ENST00000615099 168 ntBASIC6.41□□□□□ -1.38
COPB1P53618 AC015712.7-201ENST00000615211 635 ntBASIC6.41□□□□□ -1.38
COPB1P53618 AL031658.2-201ENST00000616850 651 ntBASIC6.41□□□□□ -1.38
COPB1P53618 5S_rRNA.29-201ENST00000641250 107 ntBASIC6.41□□□□□ -1.38
COPB1P53618 CASC19-260ENST00000641828 2001 ntBASIC6.41□□□□□ -1.38
COPB1P53618 ASB14-201ENST00000389601 3175 ntAPPRIS ALT2 TSL 5 BASIC6.41□□□□□ -1.38
COPB1P53618 KIAA1328-201ENST00000280020 4853 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
COPB1P53618 DYNC2LI1-201ENST00000260605 1399 ntAPPRIS P3 TSL 1 (best) BASIC6.41□□□□□ -1.38
COPB1P53618 OR2AT4-202ENST00000641504 8661 ntAPPRIS P1 BASIC6.41□□□□□ -1.38
COPB1P53618 AC099654.3-201ENST00000447087 1546 ntBASIC6.4□□□□□ -1.38
COPB1P53618 PSG10P-201ENST00000501199 1500 ntBASIC6.4□□□□□ -1.38
COPB1P53618 ZNF195-201ENST00000005082 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC6.4□□□□□ -1.38
COPB1P53618 AC009962.1-201ENST00000567327 3813 ntBASIC6.4□□□□□ -1.38
COPB1P53618 ZNF227-208ENST00000589005 2943 ntTSL 2 BASIC6.4□□□□□ -1.38
COPB1P53618 UGGT1-201ENST00000259253 10650 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
COPB1P53618 GLYATL1-201ENST00000300079 2068 ntAPPRIS P3 TSL 2 BASIC6.4□□□□□ -1.38
COPB1P53618 LYRM2-208ENST00000523377 5353 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
COPB1P53618 CRB1-203ENST00000367400 4932 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
COPB1P53618 AC012254.3-201ENST00000591183 2117 ntBASIC6.4□□□□□ -1.38
COPB1P53618 SEPT7-203ENST00000399035 4066 ntAPPRIS ALT1 TSL 5 BASIC6.4□□□□□ -1.38
COPB1P53618 SERPINB7-202ENST00000398019 2203 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
COPB1P53618 SELENOWP1-201ENST00000322792 252 ntBASIC6.4□□□□□ -1.38
COPB1P53618 ODF3-202ENST00000342593 386 ntTSL 5 BASIC6.4□□□□□ -1.38
COPB1P53618 SPINK14-201ENST00000356972 294 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
COPB1P53618 MIR323B-201ENST00000385269 82 ntBASIC6.4□□□□□ -1.38
COPB1P53618 LINC02246-202ENST00000418954 717 ntTSL 2 BASIC6.4□□□□□ -1.38
COPB1P53618 AL158013.1-202ENST00000419666 520 ntTSL 5 BASIC6.4□□□□□ -1.38
COPB1P53618 AC007064.3-201ENST00000422608 359 ntBASIC6.4□□□□□ -1.38
COPB1P53618 Z99289.1-206ENST00000425503 393 ntTSL 3 BASIC6.4□□□□□ -1.38
COPB1P53618 AC000124.1-201ENST00000448311 957 ntTSL 2 BASIC6.4□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 1124.7 ms