Protein–RNA interactions for Protein: P48742

LHX1, LIM/homeobox protein Lhx1, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX1P48742 MIR6862-1-201ENST00000613016 70 ntBASIC6.09□□□□□ -1.43
LHX1P48742 MIR6862-2-201ENST00000614755 70 ntBASIC6.09□□□□□ -1.43
LHX1P48742 AP003789.1-201ENST00000617737 605 ntBASIC6.09□□□□□ -1.43
LHX1P48742 LINC02033-201ENST00000623207 971 ntTSL 2 BASIC6.09□□□□□ -1.43
LHX1P48742 CU639417.4-201ENST00000623928 207 ntBASIC6.09□□□□□ -1.43
LHX1P48742 AL691477.1-201ENST00000624398 162 ntBASIC6.09□□□□□ -1.43
LHX1P48742 ARMCX5-201ENST00000246174 2899 ntAPPRIS P1 TSL 2 BASIC6.09□□□□□ -1.43
LHX1P48742 PARD3B-214ENST00000622699 7442 ntTSL 5 BASIC6.09□□□□□ -1.43
LHX1P48742 TTC39C-201ENST00000304621 2304 ntAPPRIS P3 TSL 1 (best) BASIC6.09□□□□□ -1.43
LHX1P48742 ZNF850-202ENST00000591344 7714 ntAPPRIS P3 TSL 1 (best) BASIC6.09□□□□□ -1.44
LHX1P48742 ENPP3-203ENST00000414305 3418 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.44
LHX1P48742 AP004289.1-201ENST00000436307 2205 ntBASIC6.09□□□□□ -1.44
LHX1P48742 NBPF20-205ENST00000622803 3689 ntTSL 5 BASIC6.09□□□□□ -1.44
LHX1P48742 TDRD5-202ENST00000367614 3632 ntAPPRIS P3 TSL 2 BASIC6.08□□□□□ -1.44
LHX1P48742 CPED1-203ENST00000423795 2189 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
LHX1P48742 FAM72B-201ENST00000355228 1773 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
LHX1P48742 KRT222-202ENST00000394052 1712 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
LHX1P48742 ZNF266-207ENST00000592904 4401 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
LHX1P48742 TRIM22-201ENST00000379965 2989 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
LHX1P48742 AL031656.1-202ENST00000457704 1995 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
LHX1P48742 NOSTRIN-201ENST00000317647 2294 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
LHX1P48742 LINC01958-201ENST00000637749 1941 ntTSL 5 BASIC6.08□□□□□ -1.44
LHX1P48742 RNA5SP131-201ENST00000365452 119 ntBASIC6.08□□□□□ -1.44
LHX1P48742 MIR323B-201ENST00000385269 82 ntBASIC6.08□□□□□ -1.44
LHX1P48742 MIR143-201ENST00000385300 106 ntBASIC6.08□□□□□ -1.44
LHX1P48742 FIGN-202ENST00000409634 746 ntTSL 5 BASIC6.08□□□□□ -1.44
LHX1P48742 KCNJ13-202ENST00000409779 1099 ntTSL 2 BASIC6.08□□□□□ -1.44
LHX1P48742 RPS26P38-201ENST00000414476 348 ntBASIC6.08□□□□□ -1.44
LHX1P48742 CFLAR-AS1-201ENST00000415011 1072 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
LHX1P48742 AC092168.2-201ENST00000430586 717 ntTSL 3 BASIC6.08□□□□□ -1.44
LHX1P48742 AC015923.1-201ENST00000435892 305 ntTSL 2 BASIC6.08□□□□□ -1.44
LHX1P48742 LINC00380-201ENST00000442478 353 ntTSL 2 BASIC6.08□□□□□ -1.44
LHX1P48742 EEF1B2P6-201ENST00000445713 673 ntBASIC6.08□□□□□ -1.44
LHX1P48742 AL157385.1-201ENST00000446973 268 ntBASIC6.08□□□□□ -1.44
LHX1P48742 AL359265.3-201ENST00000456125 579 ntTSL 5 BASIC6.08□□□□□ -1.44
LHX1P48742 ATP5J-207ENST00000457143 589 ntTSL 2 BASIC6.08□□□□□ -1.44
LHX1P48742 RPSAP39-201ENST00000467439 883 ntBASIC6.08□□□□□ -1.44
LHX1P48742 LINC02432-203ENST00000511213 719 ntTSL 2 BASIC6.08□□□□□ -1.44
LHX1P48742 AC034238.3-201ENST00000512349 591 ntTSL 4 BASIC6.08□□□□□ -1.44
LHX1P48742 AC064802.1-201ENST00000521523 866 ntTSL 2 BASIC6.08□□□□□ -1.44
LHX1P48742 DPPA3P2-202ENST00000557188 1219 ntBASIC6.08□□□□□ -1.44
LHX1P48742 AC114947.2-202ENST00000569313 643 ntTSL 3 BASIC6.08□□□□□ -1.44
LHX1P48742 AC020909.2-201ENST00000595005 626 ntTSL 2 BASIC6.08□□□□□ -1.44
LHX1P48742 AC004160.1-210ENST00000599875 689 ntTSL 5 BASIC6.08□□□□□ -1.44
LHX1P48742 AC008115.3-201ENST00000614874 549 ntBASIC6.08□□□□□ -1.44
LHX1P48742 AL513314.2-202ENST00000617077 536 ntTSL 5 BASIC6.08□□□□□ -1.44
LHX1P48742 RSU1P2-204ENST00000619977 1240 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
LHX1P48742 AL513314.2-201ENST00000621440 545 ntTSL 5 BASIC6.08□□□□□ -1.44
LHX1P48742 ZSCAN4-201ENST00000318203 2246 ntAPPRIS P1 TSL 2 BASIC6.08□□□□□ -1.44
LHX1P48742 ZNF493-203ENST00000392288 5023 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
LHX1P48742 HEATR1-203ENST00000366582 8447 ntAPPRIS P1 TSL 5 BASIC6.08□□□□□ -1.44
LHX1P48742 DDX1-208ENST00000621973 2183 ntTSL 5 BASIC6.08□□□□□ -1.44
LHX1P48742 ARHGAP20-204ENST00000528829 5880 ntAPPRIS ALT2 TSL 1 (best) BASIC6.08□□□□□ -1.44
LHX1P48742 OR52N5-202ENST00000641181 2778 ntAPPRIS P1 BASIC6.08□□□□□ -1.44
LHX1P48742 MRE11P1-201ENST00000464884 2127 ntBASIC6.08□□□□□ -1.44
LHX1P48742 CEP128-202ENST00000281129 4461 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
LHX1P48742 AC139426.3-201ENST00000605648 2059 ntBASIC6.08□□□□□ -1.44
LHX1P48742 OR5AS1-202ENST00000641320 7860 ntAPPRIS P1 BASIC6.08□□□□□ -1.44
LHX1P48742 DCDC1-207ENST00000452803 1706 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
LHX1P48742 LINC00906-206ENST00000589921 3444 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
LHX1P48742 ENKUR-201ENST00000331161 3382 ntAPPRIS P2 TSL 1 (best) BASIC6.07□□□□□ -1.44
LHX1P48742 DLG1-213ENST00000443183 2516 ntTSL 2 BASIC6.07□□□□□ -1.44
LHX1P48742 UQCC1-208ENST00000397554 3638 ntTSL 2 BASIC6.07□□□□□ -1.44
LHX1P48742 SDAD1-201ENST00000356260 3017 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
LHX1P48742 YES1P1-201ENST00000418510 1628 ntBASIC6.07□□□□□ -1.44
LHX1P48742 SRRM1P3-201ENST00000426911 2678 ntBASIC6.07□□□□□ -1.44
LHX1P48742 SGMS2-203ENST00000394686 2127 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
LHX1P48742 CACNB4-203ENST00000397327 2112 ntTSL 5 BASIC6.07□□□□□ -1.44
LHX1P48742 GIGYF2-246ENST00000629305 7878 ntTSL 5 BASIC6.07□□□□□ -1.44
LHX1P48742 ABCA10-201ENST00000269081 6362 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
LHX1P48742 RNA5SP242-201ENST00000364171 118 ntBASIC6.07□□□□□ -1.44
LHX1P48742 RNA5SP30-201ENST00000365552 115 ntBASIC6.07□□□□□ -1.44
LHX1P48742 LEMD1-203ENST00000367152 741 ntTSL 2 BASIC6.07□□□□□ -1.44
LHX1P48742 MIR130A-201ENST00000385274 89 ntBASIC6.07□□□□□ -1.44
LHX1P48742 GAPDHP42-201ENST00000406848 981 ntBASIC6.07□□□□□ -1.44
LHX1P48742 AL596448.1-201ENST00000415024 392 ntBASIC6.07□□□□□ -1.44
LHX1P48742 NENFP1-201ENST00000419476 466 ntBASIC6.07□□□□□ -1.44
LHX1P48742 BX470102.1-201ENST00000420695 531 ntTSL 2 BASIC6.07□□□□□ -1.44
LHX1P48742 AP001476.3-201ENST00000429512 415 ntTSL 3 BASIC6.07□□□□□ -1.44
LHX1P48742 AC105021.1-201ENST00000455347 590 ntTSL 3 BASIC6.07□□□□□ -1.44
LHX1P48742 AP002371.1-201ENST00000463604 433 ntBASIC6.07□□□□□ -1.44
LHX1P48742 LINC02339-201ENST00000472649 752 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
LHX1P48742 PHC3-208ENST00000481639 1075 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
LHX1P48742 AL136038.1-201ENST00000497246 351 ntBASIC6.07□□□□□ -1.44
LHX1P48742 NRBF2P4-201ENST00000520874 850 ntBASIC6.07□□□□□ -1.44
LHX1P48742 AC104212.3-201ENST00000522044 444 ntTSL 3 BASIC6.07□□□□□ -1.44
LHX1P48742 MOCS2-208ENST00000527216 707 ntTSL 3 BASIC6.07□□□□□ -1.44
LHX1P48742 AC091544.7-201ENST00000554000 240 ntTSL 3 BASIC6.07□□□□□ -1.44
LHX1P48742 AC234775.3-201ENST00000564612 656 ntBASIC6.07□□□□□ -1.44
LHX1P48742 SNORD95-201ENST00000579879 68 ntBASIC6.07□□□□□ -1.44
LHX1P48742 Z98949.1-203ENST00000597284 851 ntTSL 5 BASIC6.07□□□□□ -1.44
LHX1P48742 AC087468.1-201ENST00000604365 630 ntBASIC6.07□□□□□ -1.44
LHX1P48742 AC079791.1-201ENST00000605356 973 ntBASIC6.07□□□□□ -1.44
LHX1P48742 UGP2-232ENST00000640075 567 ntTSL 5 BASIC6.07□□□□□ -1.44
LHX1P48742 ATP6V1A-201ENST00000273398 4591 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
LHX1P48742 LINC00630-201ENST00000416381 2012 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
LHX1P48742 RFX3-212ENST00000617270 9253 ntAPPRIS P1 TSL 2 BASIC6.07□□□□□ -1.44
LHX1P48742 IQCJ-SCHIP1-205ENST00000527095 1410 ntAPPRIS ALT2 TSL 5 BASIC6.07□□□□□ -1.44
LHX1P48742 AF127577.4-201ENST00000432230 5929 ntTSL 5 BASIC6.07□□□□□ -1.44
LHX1P48742 TCF7L2-217ENST00000536810 3953 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 110.8 ms