Protein–RNA interactions for Protein: P48729

CSNK1A1, Casein kinase I isoform alpha, humanhuman

Predictions only

Length 337 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1A1P48729 LMOD3-201ENST00000420581 4086 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
CSNK1A1P48729 TOX3-202ENST00000407228 3124 ntAPPRIS ALT2 TSL 2 BASIC5.14□□□□□ -1.59
CSNK1A1P48729 PPP2R5E-202ENST00000422769 3478 ntTSL 2 BASIC5.14□□□□□ -1.59
CSNK1A1P48729 FGF1-214ENST00000612258 3805 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
CSNK1A1P48729 AADAT-202ENST00000353187 2101 ntAPPRIS P3 TSL 2 BASIC5.14□□□□□ -1.59
CSNK1A1P48729 LINC00615-201ENST00000546725 1406 ntTSL 2 BASIC5.14□□□□□ -1.59
CSNK1A1P48729 ROR1-AS1-202ENST00000424995 2189 ntTSL 2 BASIC5.14□□□□□ -1.59
CSNK1A1P48729 SLC4A7-206ENST00000428386 7385 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
CSNK1A1P48729 TCF4-290ENST00000638154 7801 ntAPPRIS ALT1 TSL 5 BASIC5.13□□□□□ -1.59
CSNK1A1P48729 NOL4-202ENST00000535384 1853 ntTSL 2 BASIC5.13□□□□□ -1.59
CSNK1A1P48729 ADAM21-201ENST00000603540 2658 ntAPPRIS P1 TSL 3 BASIC5.13□□□□□ -1.59
CSNK1A1P48729 SLC16A6-201ENST00000327268 3807 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
CSNK1A1P48729 PCDH15-215ENST00000409834 5401 ntTSL 5 BASIC5.13□□□□□ -1.59
CSNK1A1P48729 EXO1-201ENST00000348581 3192 ntAPPRIS P3 TSL 1 (best) BASIC5.13□□□□□ -1.59
CSNK1A1P48729 MAP2-205ENST00000392194 5303 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
CSNK1A1P48729 ZNF415-203ENST00000500065 2496 ntAPPRIS ALT2 TSL 4 BASIC5.13□□□□□ -1.59
CSNK1A1P48729 MFSD8-239ENST00000641590 2479 ntBASIC5.13□□□□□ -1.59
CSNK1A1P48729 SENP8-202ENST00000542035 1672 ntAPPRIS P1 TSL 2 BASIC5.13□□□□□ -1.59
CSNK1A1P48729 FAM229B-201ENST00000368656 2543 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
CSNK1A1P48729 CARD6-201ENST00000254691 4221 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
CSNK1A1P48729 RN7SKP275-201ENST00000364626 301 ntBASIC5.13□□□□□ -1.59
CSNK1A1P48729 YAF2-202ENST00000380790 1211 ntTSL 2 BASIC5.13□□□□□ -1.59
CSNK1A1P48729 CXADRP1-201ENST00000398098 1095 ntBASIC5.13□□□□□ -1.59
CSNK1A1P48729 HORMAD2-202ENST00000403975 2115 ntAPPRIS P1 TSL 2 BASIC5.13□□□□□ -1.59
CSNK1A1P48729 METTL15P3-201ENST00000415522 1221 ntBASIC5.13□□□□□ -1.59
CSNK1A1P48729 AK4P4-201ENST00000419465 646 ntBASIC5.13□□□□□ -1.59
CSNK1A1P48729 MRPS21P2-201ENST00000424704 264 ntBASIC5.13□□□□□ -1.59
CSNK1A1P48729 AC115283.1-201ENST00000427353 400 ntBASIC5.13□□□□□ -1.59
CSNK1A1P48729 RPL5P2-201ENST00000429598 854 ntBASIC5.13□□□□□ -1.59
CSNK1A1P48729 AC005008.2-201ENST00000431501 715 ntTSL 3 BASIC5.13□□□□□ -1.59
CSNK1A1P48729 AC008063.2-201ENST00000432251 619 ntTSL 2 BASIC5.13□□□□□ -1.59
CSNK1A1P48729 PCBP2P1-201ENST00000437262 977 ntBASIC5.13□□□□□ -1.59
CSNK1A1P48729 AL583854.1-201ENST00000438818 613 ntTSL 5 BASIC5.13□□□□□ -1.59
CSNK1A1P48729 AL136988.2-201ENST00000440729 861 ntTSL 3 BASIC5.13□□□□□ -1.59
CSNK1A1P48729 MOB4-207ENST00000448447 1021 ntTSL 2 BASIC5.13□□□□□ -1.59
CSNK1A1P48729 AC132807.1-201ENST00000449613 458 ntTSL 3 BASIC5.13□□□□□ -1.59
CSNK1A1P48729 AL359839.1-201ENST00000451975 1160 ntBASIC5.13□□□□□ -1.59
CSNK1A1P48729 AC105021.1-201ENST00000455347 590 ntTSL 3 BASIC5.13□□□□□ -1.59
CSNK1A1P48729 RPL12P39-201ENST00000455456 496 ntBASIC5.13□□□□□ -1.59
CSNK1A1P48729 LINC01487-201ENST00000462531 905 ntTSL 2 BASIC5.13□□□□□ -1.59
CSNK1A1P48729 PRB1-202ENST00000500254 775 ntAPPRIS P3 TSL 1 (best) BASIC5.13□□□□□ -1.59
CSNK1A1P48729 AC105420.1-201ENST00000504389 582 ntBASIC5.13□□□□□ -1.59
CSNK1A1P48729 AC112184.1-201ENST00000505179 312 ntBASIC5.13□□□□□ -1.59
CSNK1A1P48729 AC114781.3-201ENST00000512083 142 ntBASIC5.13□□□□□ -1.59
CSNK1A1P48729 NSMCE2-202ENST00000517315 996 ntTSL 3 BASIC5.13□□□□□ -1.59
CSNK1A1P48729 AC060775.1-201ENST00000518241 520 ntBASIC5.13□□□□□ -1.59
CSNK1A1P48729 HMGN2P36-201ENST00000529541 409 ntBASIC5.13□□□□□ -1.59
CSNK1A1P48729 AC134511.1-201ENST00000535721 192 ntTSL 3 BASIC5.13□□□□□ -1.59
CSNK1A1P48729 AC007569.1-202ENST00000547282 303 ntTSL 3 BASIC5.13□□□□□ -1.59
CSNK1A1P48729 AC084757.2-201ENST00000559165 540 ntTSL 2 BASIC5.13□□□□□ -1.59
CSNK1A1P48729 AP001007.3-201ENST00000560744 356 ntTSL 5 BASIC5.13□□□□□ -1.59
CSNK1A1P48729 AC099850.2-201ENST00000577660 557 ntAPPRIS P1 TSL 3 BASIC5.13□□□□□ -1.59
CSNK1A1P48729 LINC01906-201ENST00000582962 499 ntTSL 4 BASIC5.13□□□□□ -1.59
CSNK1A1P48729 AC079315.1-201ENST00000602952 623 ntBASIC5.13□□□□□ -1.59
CSNK1A1P48729 AL138895.2-201ENST00000603019 178 ntBASIC5.13□□□□□ -1.59
CSNK1A1P48729 AC067773.1-201ENST00000603284 1094 ntBASIC5.13□□□□□ -1.59
CSNK1A1P48729 NANOGP3-201ENST00000605855 286 ntBASIC5.13□□□□□ -1.59
CSNK1A1P48729 CXADRP3-202ENST00000617265 1100 ntBASIC5.13□□□□□ -1.59
CSNK1A1P48729 RNA5SP439-201ENST00000617595 124 ntBASIC5.13□□□□□ -1.59
CSNK1A1P48729 NADK2-211ENST00000617628 744 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
CSNK1A1P48729 AL157938.3-201ENST00000502188 3084 ntTSL 4 BASIC5.13□□□□□ -1.59
CSNK1A1P48729 ZNF253-203ENST00000589717 3519 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
CSNK1A1P48729 VPS13C-204ENST00000395898 11012 ntAPPRIS ALT2 TSL 1 (best) BASIC5.13□□□□□ -1.59
CSNK1A1P48729 LRRC36-202ENST00000435835 1765 ntTSL 2 BASIC5.13□□□□□ -1.59
CSNK1A1P48729 AC098679.1-203ENST00000505532 2227 ntTSL 2 BASIC5.13□□□□□ -1.59
CSNK1A1P48729 SAMM50P1-201ENST00000455403 1399 ntBASIC5.13□□□□□ -1.59
CSNK1A1P48729 MSR1-204ENST00000381998 2826 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
CSNK1A1P48729 ACADSB-201ENST00000358776 5859 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
CSNK1A1P48729 PTPRB-202ENST00000334414 12316 ntAPPRIS P4 TSL 1 (best) BASIC5.12□□□□□ -1.59
CSNK1A1P48729 PIGA-206ENST00000542278 3626 ntAPPRIS P1 TSL 5 BASIC5.12□□□□□ -1.59
CSNK1A1P48729 RWDD2A-201ENST00000369724 3744 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
CSNK1A1P48729 KIAA1841-205ENST00000453873 4294 ntAPPRIS P1 TSL 5 BASIC5.12□□□□□ -1.59
CSNK1A1P48729 PSMC6-201ENST00000445930 2188 ntAPPRIS P2 TSL 1 (best) BASIC5.12□□□□□ -1.59
CSNK1A1P48729 NBPF26-202ENST00000611287 2701 ntTSL 5 BASIC5.12□□□□□ -1.59
CSNK1A1P48729 PDE5A-203ENST00000394439 6770 ntAPPRIS ALT2 TSL 5 BASIC5.12□□□□□ -1.59
CSNK1A1P48729 ZNF432-202ENST00000594154 4513 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
CSNK1A1P48729 CEP85L-201ENST00000360290 1736 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
CSNK1A1P48729 SLC17A4-202ENST00000397076 2331 ntTSL 2 BASIC5.12□□□□□ -1.59
CSNK1A1P48729 DDX58-201ENST00000379868 4089 ntTSL 5 BASIC5.12□□□□□ -1.59
CSNK1A1P48729 SLC12A1-201ENST00000330289 1764 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
CSNK1A1P48729 BICRAL-201ENST00000314073 6530 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
CSNK1A1P48729 AL360270.2-201ENST00000562952 5985 ntBASIC5.12□□□□□ -1.59
CSNK1A1P48729 CFAP57-204ENST00000528956 3037 ntTSL 2 BASIC5.12□□□□□ -1.59
CSNK1A1P48729 GVINP1-202ENST00000531871 7271 ntBASIC5.12□□□□□ -1.59
CSNK1A1P48729 ZNF107-205ENST00000613690 5589 ntAPPRIS ALT2 TSL 5 BASIC5.12□□□□□ -1.59
CSNK1A1P48729 POU1F1-201ENST00000344265 1149 ntTSL 5 BASIC5.12□□□□□ -1.59
CSNK1A1P48729 RNA5SP500-201ENST00000364486 119 ntBASIC5.12□□□□□ -1.59
CSNK1A1P48729 RNA5SP91-201ENST00000390902 119 ntBASIC5.12□□□□□ -1.59
CSNK1A1P48729 RN7SKP240-201ENST00000410583 375 ntBASIC5.12□□□□□ -1.59
CSNK1A1P48729 LYST-AS1-201ENST00000412098 521 ntTSL 3 BASIC5.12□□□□□ -1.59
CSNK1A1P48729 AL357752.1-201ENST00000412817 349 ntBASIC5.12□□□□□ -1.59
CSNK1A1P48729 MRPL53P1-201ENST00000414323 319 ntBASIC5.12□□□□□ -1.59
CSNK1A1P48729 LINC00701-201ENST00000418295 742 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
CSNK1A1P48729 AC009506.2-201ENST00000420635 840 ntBASIC5.12□□□□□ -1.59
CSNK1A1P48729 AL035660.1-201ENST00000422041 222 ntBASIC5.12□□□□□ -1.59
CSNK1A1P48729 ATP5A1P8-201ENST00000423669 1291 ntBASIC5.12□□□□□ -1.59
CSNK1A1P48729 AC108066.1-201ENST00000437261 596 ntTSL 4 BASIC5.12□□□□□ -1.59
CSNK1A1P48729 RAET1E-AS1-201ENST00000446954 491 ntTSL 2 BASIC5.12□□□□□ -1.59
CSNK1A1P48729 RPS23P2-201ENST00000463671 415 ntBASIC5.12□□□□□ -1.59
CSNK1A1P48729 PDCL3P4-201ENST00000489621 720 ntBASIC5.12□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 112.6 ms