Protein–RNA interactions for Protein: P46736

BRCC3, Lys-63-specific deubiquitinase BRCC36, humanhuman

Predictions only

Length 316 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3P46736 AC011503.1-201ENST00000596326 1585 ntTSL 2 BASIC6.08□□□□□ -1.44
BRCC3P46736 LINC01981-201ENST00000432163 2833 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
BRCC3P46736 NRG3-202ENST00000372142 3136 ntAPPRIS ALT2 TSL 1 (best) BASIC6.08□□□□□ -1.44
BRCC3P46736 OLFM3-201ENST00000338858 2189 ntAPPRIS ALT1 TSL 1 (best) BASIC6.08□□□□□ -1.44
BRCC3P46736 RNASEL-202ENST00000539397 4046 ntTSL 2 BASIC6.08□□□□□ -1.44
BRCC3P46736 THEMIS-206ENST00000630369 2786 ntAPPRIS ALT2 TSL 1 (best) BASIC6.08□□□□□ -1.44
BRCC3P46736 RUFY3-202ENST00000381006 3098 ntAPPRIS P1 TSL 5 BASIC6.08□□□□□ -1.44
BRCC3P46736 AK3-201ENST00000359883 1536 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
BRCC3P46736 CR788268.1-201ENST00000603931 1809 ntBASIC6.08□□□□□ -1.44
BRCC3P46736 TBC1D32-204ENST00000398212 3824 ntAPPRIS P2 TSL 5 BASIC6.08□□□□□ -1.44
BRCC3P46736 NAV3-201ENST00000397909 9821 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
BRCC3P46736 C15orf41-201ENST00000338183 2578 ntTSL 5 BASIC6.08□□□□□ -1.44
BRCC3P46736 NAT1-203ENST00000517492 2280 ntAPPRIS P1 TSL 2 BASIC6.08□□□□□ -1.44
BRCC3P46736 ARHGAP20-206ENST00000533353 6066 ntAPPRIS ALT2 TSL 1 (best) BASIC6.07□□□□□ -1.44
BRCC3P46736 LIN7C-201ENST00000278193 4688 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
BRCC3P46736 BEND2-201ENST00000380030 1938 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
BRCC3P46736 CD86-204ENST00000469710 1604 ntTSL 2 BASIC6.07□□□□□ -1.44
BRCC3P46736 ZNF160-203ENST00000429604 4336 ntAPPRIS P1 TSL 3 BASIC6.07□□□□□ -1.44
BRCC3P46736 PLCXD3-202ENST00000377801 7704 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
BRCC3P46736 LINC01684-203ENST00000453784 2908 ntTSL 2 BASIC6.07□□□□□ -1.44
BRCC3P46736 TCF7L2-217ENST00000536810 3953 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
BRCC3P46736 TESPA1-203ENST00000524622 4188 ntAPPRIS ALT2 TSL 1 (best) BASIC6.07□□□□□ -1.44
BRCC3P46736 ZNF300P1-202ENST00000520773 3115 ntTSL 5 BASIC6.07□□□□□ -1.44
BRCC3P46736 ROR1-204ENST00000545203 5362 ntAPPRIS ALT2 TSL 5 BASIC6.07□□□□□ -1.44
BRCC3P46736 ZC2HC1B-201ENST00000237275 1002 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
BRCC3P46736 SNORA70.9-201ENST00000384370 135 ntBASIC6.07□□□□□ -1.44
BRCC3P46736 RN7SKP278-201ENST00000410504 342 ntBASIC6.07□□□□□ -1.44
BRCC3P46736 RN7SKP59-201ENST00000410520 314 ntBASIC6.07□□□□□ -1.44
BRCC3P46736 AL359636.2-201ENST00000412262 259 ntTSL 3 BASIC6.07□□□□□ -1.44
BRCC3P46736 NPM1P4-201ENST00000414095 812 ntBASIC6.07□□□□□ -1.44
BRCC3P46736 AC244035.2-201ENST00000425896 630 ntTSL 3 BASIC6.07□□□□□ -1.44
BRCC3P46736 CFL1P1-202ENST00000432948 411 ntBASIC6.07□□□□□ -1.44
BRCC3P46736 AC019185.1-201ENST00000442718 389 ntBASIC6.07□□□□□ -1.44
BRCC3P46736 AL450023.1-201ENST00000450868 751 ntBASIC6.07□□□□□ -1.44
BRCC3P46736 RN7SL547P-201ENST00000490793 290 ntBASIC6.07□□□□□ -1.44
BRCC3P46736 LINC00518-204ENST00000491317 1228 ntTSL 2 BASIC6.07□□□□□ -1.44
BRCC3P46736 TEX49-202ENST00000548380 573 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
BRCC3P46736 BLOC1S6-209ENST00000565409 616 ntTSL 4 BASIC6.07□□□□□ -1.44
BRCC3P46736 AC120349.1-201ENST00000599498 282 ntTSL 5 BASIC6.07□□□□□ -1.44
BRCC3P46736 MTRNR2L3-201ENST00000543500 1539 ntAPPRIS P1 BASIC6.07□□□□□ -1.44
BRCC3P46736 PEX5L-202ENST00000392649 8540 ntAPPRIS ALT2 TSL 5 BASIC6.07□□□□□ -1.44
BRCC3P46736 TOPBP1-201ENST00000260810 5378 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
BRCC3P46736 AL354696.2-201ENST00000619407 1910 ntTSL 2 BASIC6.07□□□□□ -1.44
BRCC3P46736 NXPE4-202ENST00000424261 1687 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
BRCC3P46736 AP004243.1-201ENST00000529108 1433 ntAPPRIS P1 TSL 5 BASIC6.07□□□□□ -1.44
BRCC3P46736 FAM205A-201ENST00000378788 4225 ntAPPRIS P1 TSL 2 BASIC6.07□□□□□ -1.44
BRCC3P46736 LINC00824-203ENST00000520206 2055 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
BRCC3P46736 CASC19-248ENST00000641674 1356 ntBASIC6.06□□□□□ -1.44
BRCC3P46736 PRDM2-206ENST00000413440 6175 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
BRCC3P46736 GDNF-AS1-202ENST00000510986 1941 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
BRCC3P46736 OR5M8-201ENST00000327216 1047 ntAPPRIS P1 BASIC6.06□□□□□ -1.44
BRCC3P46736 RNA5SP234-201ENST00000363916 119 ntBASIC6.06□□□□□ -1.44
BRCC3P46736 BMS1P13-201ENST00000417301 885 ntBASIC6.06□□□□□ -1.44
BRCC3P46736 AC006335.2-201ENST00000437993 330 ntBASIC6.06□□□□□ -1.44
BRCC3P46736 AC007386.1-201ENST00000455212 582 ntBASIC6.06□□□□□ -1.44
BRCC3P46736 AC068196.1-201ENST00000456895 833 ntTSL 3 BASIC6.06□□□□□ -1.44
BRCC3P46736 RPS23P2-201ENST00000463671 415 ntBASIC6.06□□□□□ -1.44
BRCC3P46736 AC068633.1-202ENST00000476460 458 ntTSL 2 BASIC6.06□□□□□ -1.44
BRCC3P46736 AC079080.1-201ENST00000479841 822 ntBASIC6.06□□□□□ -1.44
BRCC3P46736 LINC02040-201ENST00000481004 556 ntTSL 5 BASIC6.06□□□□□ -1.44
BRCC3P46736 LINC02271-202ENST00000506379 596 ntTSL 4 BASIC6.06□□□□□ -1.44
BRCC3P46736 AC106732.1-201ENST00000512458 550 ntTSL 4 BASIC6.06□□□□□ -1.44
BRCC3P46736 AC140125.1-201ENST00000515739 684 ntTSL 5 BASIC6.06□□□□□ -1.44
BRCC3P46736 LINC00589-202ENST00000518623 938 ntTSL 4 BASIC6.06□□□□□ -1.44
BRCC3P46736 NRBF2P4-201ENST00000520874 850 ntBASIC6.06□□□□□ -1.44
BRCC3P46736 ST3GAL3-233ENST00000531816 344 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
BRCC3P46736 CREBZF-209ENST00000534224 545 ntTSL 4 BASIC6.06□□□□□ -1.44
BRCC3P46736 KLRC1-204ENST00000536188 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC6.06□□□□□ -1.44
BRCC3P46736 AC126615.2-201ENST00000553003 515 ntBASIC6.06□□□□□ -1.44
BRCC3P46736 AC022916.4-201ENST00000585646 475 ntTSL 3 BASIC6.06□□□□□ -1.44
BRCC3P46736 LINC01320-210ENST00000626008 929 ntTSL 5 BASIC6.06□□□□□ -1.44
BRCC3P46736 AC005154.1-203ENST00000626245 451 ntTSL 5 BASIC6.06□□□□□ -1.44
BRCC3P46736 AJ009632.2-205ENST00000635225 1169 ntTSL 5 BASIC6.06□□□□□ -1.44
BRCC3P46736 KCNJ16-202ENST00000392670 4009 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
BRCC3P46736 MPDZ-219ENST00000546205 6342 ntAPPRIS ALT2 TSL 5 BASIC6.06□□□□□ -1.44
BRCC3P46736 SERPINA9-204ENST00000424550 1462 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
BRCC3P46736 KBTBD3-201ENST00000526793 3751 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
BRCC3P46736 PRLR-201ENST00000231423 1679 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
BRCC3P46736 ZNF92-203ENST00000431504 2947 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
BRCC3P46736 UGT2B15-201ENST00000338206 2077 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
BRCC3P46736 ZNF630-202ENST00000409324 2455 ntAPPRIS P2 TSL 1 (best) BASIC6.06□□□□□ -1.44
BRCC3P46736 PREPL-201ENST00000260648 3672 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
BRCC3P46736 FGG-205ENST00000407946 1636 ntTSL 5 BASIC6.06□□□□□ -1.44
BRCC3P46736 AC025470.1-201ENST00000510053 2032 ntBASIC6.06□□□□□ -1.44
BRCC3P46736 CLIP4-202ENST00000401605 2322 ntTSL 2 BASIC6.05□□□□□ -1.44
BRCC3P46736 CDH13-209ENST00000567109 8042 ntAPPRIS ALT2 TSL 1 (best) BASIC6.05□□□□□ -1.44
BRCC3P46736 APOL6-201ENST00000409652 10121 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
BRCC3P46736 AC020656.2-201ENST00000613291 5309 ntBASIC6.05□□□□□ -1.44
BRCC3P46736 NOSTRIN-201ENST00000317647 2294 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
BRCC3P46736 EEF1A1P30-201ENST00000429708 1315 ntBASIC6.05□□□□□ -1.44
BRCC3P46736 BX322639.1-201ENST00000609841 6590 ntTSL 4 BASIC6.05□□□□□ -1.44
BRCC3P46736 TRPM6-202ENST00000360774 8425 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
BRCC3P46736 AC027279.1-201ENST00000568885 4284 ntBASIC6.05□□□□□ -1.44
BRCC3P46736 AL050403.1-201ENST00000448859 2006 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
BRCC3P46736 OR2AE1-201ENST00000316368 1071 ntAPPRIS P1 BASIC6.05□□□□□ -1.44
BRCC3P46736 SNORD1C-201ENST00000363315 78 ntBASIC6.05□□□□□ -1.44
BRCC3P46736 AC012499.1-201ENST00000412133 741 ntTSL 5 BASIC6.05□□□□□ -1.44
BRCC3P46736 RPL35AP24-201ENST00000413846 330 ntBASIC6.05□□□□□ -1.44
BRCC3P46736 CASP5-203ENST00000418434 1023 ntTSL 5 BASIC6.05□□□□□ -1.44
BRCC3P46736 AL390243.1-201ENST00000422038 708 ntTSL 2 BASIC6.05□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 98.6 ms