Protein–RNA interactions for Protein: P43307

SSR1, Translocon-associated protein subunit alpha, humanhuman

Known RBP Predictions only

Length 286 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1P43307 AL160286.3-201ENST00000569644 3294 ntTSL 2 BASIC6.22□□□□□ -1.41
SSR1P43307 C3orf14-201ENST00000232519 690 ntAPPRIS P1 TSL 3 BASIC6.22□□□□□ -1.41
SSR1P43307 AL050305.1-201ENST00000399993 1230 ntBASIC6.22□□□□□ -1.41
SSR1P43307 AL121977.1-201ENST00000401636 979 ntBASIC6.22□□□□□ -1.41
SSR1P43307 AL109610.1-201ENST00000414598 431 ntTSL 3 BASIC6.22□□□□□ -1.41
SSR1P43307 AL359885.1-201ENST00000415786 903 ntBASIC6.22□□□□□ -1.41
SSR1P43307 NPM1P18-201ENST00000434232 732 ntBASIC6.22□□□□□ -1.41
SSR1P43307 AC073410.1-201ENST00000435125 589 ntBASIC6.22□□□□□ -1.41
SSR1P43307 MTND6P5-201ENST00000448266 512 ntBASIC6.22□□□□□ -1.41
SSR1P43307 AL590399.3-202ENST00000448491 495 ntTSL 5 BASIC6.22□□□□□ -1.41
SSR1P43307 MACROD2-IT1-201ENST00000448536 665 ntTSL 5 BASIC6.22□□□□□ -1.41
SSR1P43307 AKR1C2-203ENST00000455190 1098 ntTSL 2 BASIC6.22□□□□□ -1.41
SSR1P43307 AC098818.1-201ENST00000478593 252 ntBASIC6.22□□□□□ -1.41
SSR1P43307 DUBR-205ENST00000495228 411 ntTSL 2 BASIC6.22□□□□□ -1.41
SSR1P43307 AC008957.1-202ENST00000512329 681 ntTSL 3 BASIC6.22□□□□□ -1.41
SSR1P43307 RPS27AP18-201ENST00000515536 459 ntBASIC6.22□□□□□ -1.41
SSR1P43307 AP001893.1-201ENST00000532866 362 ntTSL 5 BASIC6.22□□□□□ -1.41
SSR1P43307 C3orf14-207ENST00000542214 768 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
SSR1P43307 AC078864.1-201ENST00000547538 512 ntTSL 4 BASIC6.22□□□□□ -1.41
SSR1P43307 AL132989.1-201ENST00000557322 576 ntTSL 3 BASIC6.22□□□□□ -1.41
SSR1P43307 AC021483.1-201ENST00000560760 539 ntTSL 3 BASIC6.22□□□□□ -1.41
SSR1P43307 THSD4-AS1-201ENST00000561571 554 ntTSL 5 BASIC6.22□□□□□ -1.41
SSR1P43307 AC012370.2-201ENST00000597541 1080 ntTSL 5 BASIC6.22□□□□□ -1.41
SSR1P43307 AC008750.7-201ENST00000600765 559 ntTSL 4 BASIC6.22□□□□□ -1.41
SSR1P43307 AC073389.3-201ENST00000609434 935 ntBASIC6.22□□□□□ -1.41
SSR1P43307 Metazoa_SRP.35-201ENST00000611402 288 ntBASIC6.22□□□□□ -1.41
SSR1P43307 uc_338.31-201ENST00000615595 186 ntBASIC6.22□□□□□ -1.41
SSR1P43307 AL121890.2-201ENST00000617644 465 ntBASIC6.22□□□□□ -1.41
SSR1P43307 FP236315.3-201ENST00000623587 307 ntTSL 2 BASIC6.22□□□□□ -1.41
SSR1P43307 MMP8-201ENST00000236826 3056 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
SSR1P43307 SYNCRIP-204ENST00000616122 6764 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
SSR1P43307 PROX1-205ENST00000498508 8498 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
SSR1P43307 LDAH-212ENST00000619656 3663 ntTSL 2 BASIC6.22□□□□□ -1.41
SSR1P43307 CSMD3-204ENST00000455883 12485 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
SSR1P43307 SLC12A1-205ENST00000558405 3426 ntAPPRIS P3 TSL 1 (best) BASIC6.22□□□□□ -1.41
SSR1P43307 AC011933.2-201ENST00000578539 2790 ntBASIC6.22□□□□□ -1.41
SSR1P43307 RC3H1-202ENST00000367694 3775 ntAPPRIS ALT1 TSL 2 BASIC6.21□□□□□ -1.41
SSR1P43307 RGPD1-206ENST00000641458 5271 ntAPPRIS ALT2 BASIC6.21□□□□□ -1.41
SSR1P43307 AP004607.3-201ENST00000530354 3915 ntBASIC6.21□□□□□ -1.41
SSR1P43307 IKZF2-207ENST00000434687 3888 ntAPPRIS P2 TSL 5 BASIC6.21□□□□□ -1.41
SSR1P43307 RNA5SP211-201ENST00000365516 117 ntBASIC6.21□□□□□ -1.42
SSR1P43307 MIR137-201ENST00000385223 102 ntBASIC6.21□□□□□ -1.42
SSR1P43307 DCN-202ENST00000393155 2133 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
SSR1P43307 RBBP4P5-201ENST00000398583 1266 ntBASIC6.21□□□□□ -1.42
SSR1P43307 AL358178.1-201ENST00000407698 397 ntBASIC6.21□□□□□ -1.42
SSR1P43307 RNA5SP431-201ENST00000410312 120 ntBASIC6.21□□□□□ -1.42
SSR1P43307 RNA5SP198-201ENST00000410376 127 ntBASIC6.21□□□□□ -1.42
SSR1P43307 AC245096.1-201ENST00000413104 546 ntBASIC6.21□□□□□ -1.42
SSR1P43307 AL355581.1-201ENST00000415964 830 ntTSL 2 BASIC6.21□□□□□ -1.42
SSR1P43307 LINC01114-201ENST00000421071 482 ntTSL 3 BASIC6.21□□□□□ -1.42
SSR1P43307 AL137071.1-201ENST00000422150 243 ntTSL 3 BASIC6.21□□□□□ -1.42
SSR1P43307 AL162727.2-201ENST00000428429 395 ntTSL 3 BASIC6.21□□□□□ -1.42
SSR1P43307 LINC00380-201ENST00000442478 353 ntTSL 2 BASIC6.21□□□□□ -1.42
SSR1P43307 TRIM60P16-201ENST00000444048 694 ntBASIC6.21□□□□□ -1.42
SSR1P43307 RNU1-88P-201ENST00000459274 128 ntBASIC6.21□□□□□ -1.42
SSR1P43307 OR7E99P-201ENST00000505750 922 ntBASIC6.21□□□□□ -1.42
SSR1P43307 RCHY1-206ENST00000507014 650 ntTSL 3 BASIC6.21□□□□□ -1.42
SSR1P43307 JCHAIN-204ENST00000510437 640 ntAPPRIS P1 TSL 3 BASIC6.21□□□□□ -1.42
SSR1P43307 MIR2117-201ENST00000516780 80 ntBASIC6.21□□□□□ -1.42
SSR1P43307 RAD21-204ENST00000518055 896 ntTSL 2 BASIC6.21□□□□□ -1.42
SSR1P43307 AC110056.1-201ENST00000525759 911 ntBASIC6.21□□□□□ -1.42
SSR1P43307 AP002370.2-201ENST00000531424 545 ntTSL 3 BASIC6.21□□□□□ -1.42
SSR1P43307 AC090424.1-201ENST00000535243 736 ntBASIC6.21□□□□□ -1.42
SSR1P43307 ASB8-203ENST00000535988 679 ntTSL 2 BASIC6.21□□□□□ -1.42
SSR1P43307 GARSP1-201ENST00000570895 719 ntBASIC6.21□□□□□ -1.42
SSR1P43307 STARD6-202ENST00000577499 696 ntTSL 2 BASIC6.21□□□□□ -1.42
SSR1P43307 AC005703.3-201ENST00000579159 373 ntTSL 3 BASIC6.21□□□□□ -1.42
SSR1P43307 ARGFXP2-201ENST00000579304 949 ntBASIC6.21□□□□□ -1.42
SSR1P43307 AC138207.8-204ENST00000579588 527 ntBASIC6.21□□□□□ -1.42
SSR1P43307 MIR4502-201ENST00000580432 81 ntBASIC6.21□□□□□ -1.42
SSR1P43307 MIR5010-201ENST00000582846 120 ntBASIC6.21□□□□□ -1.42
SSR1P43307 LINC01533-201ENST00000585739 616 ntTSL 5 BASIC6.21□□□□□ -1.42
SSR1P43307 APOC2-205ENST00000592257 444 ntTSL 3 BASIC6.21□□□□□ -1.42
SSR1P43307 AC124856.1-201ENST00000600819 896 ntBASIC6.21□□□□□ -1.42
SSR1P43307 MALAT1-214ENST00000618925 424 ntTSL 5 BASIC6.21□□□□□ -1.42
SSR1P43307 AC073488.3-201ENST00000631611 778 ntBASIC6.21□□□□□ -1.42
SSR1P43307 ZNF782-208ENST00000535338 3296 ntAPPRIS P1 TSL 3 BASIC6.21□□□□□ -1.42
SSR1P43307 CTAGE5-201ENST00000280082 2554 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
SSR1P43307 CLVS1-201ENST00000325897 3486 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
SSR1P43307 GNL2P1-201ENST00000451274 2190 ntBASIC6.21□□□□□ -1.42
SSR1P43307 ESRRG-204ENST00000361525 5363 ntAPPRIS P1 TSL 5 BASIC6.21□□□□□ -1.42
SSR1P43307 CDC42BPA-204ENST00000366767 9320 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
SSR1P43307 DNAH5-201ENST00000265104 15633 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
SSR1P43307 SLCO1C1-201ENST00000266509 3365 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
SSR1P43307 ZFYVE9-202ENST00000357206 4567 ntAPPRIS ALT1 TSL 1 (best) BASIC6.21□□□□□ -1.42
SSR1P43307 NDUFA5-207ENST00000471770 5608 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
SSR1P43307 AGO3-203ENST00000373191 19687 ntAPPRIS P1 TSL 2 BASIC6.2□□□□□ -1.42
SSR1P43307 ZNF347-201ENST00000334197 7960 ntAPPRIS P3 TSL 1 (best) BASIC6.2□□□□□ -1.42
SSR1P43307 LINC00504-201ENST00000505089 4672 ntTSL 2 BASIC6.2□□□□□ -1.42
SSR1P43307 PSG10P-201ENST00000501199 1500 ntBASIC6.2□□□□□ -1.42
SSR1P43307 MTRNR2L3-201ENST00000543500 1539 ntAPPRIS P1 BASIC6.2□□□□□ -1.42
SSR1P43307 OR6C75-202ENST00000641576 4569 ntAPPRIS P1 BASIC6.2□□□□□ -1.42
SSR1P43307 AC018809.2-201ENST00000602436 3823 ntBASIC6.2□□□□□ -1.42
SSR1P43307 CEACAM1-201ENST00000161559 3519 ntAPPRIS P3 TSL 1 (best) BASIC6.2□□□□□ -1.42
SSR1P43307 ARHGAP18-201ENST00000368149 4462 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
SSR1P43307 AL162456.1-201ENST00000634535 2006 ntBASIC6.2□□□□□ -1.42
SSR1P43307 KRT222-202ENST00000394052 1712 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
SSR1P43307 AC008627.1-201ENST00000517511 1704 ntBASIC6.2□□□□□ -1.42
SSR1P43307 RN7SKP69-201ENST00000365390 305 ntBASIC6.2□□□□□ -1.42
SSR1P43307 APOOL-201ENST00000373173 1279 ntAPPRIS P2 TSL 1 (best) BASIC6.2□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 68.2 ms