Protein–RNA interactions for Protein: P35499

SCN4A, Sodium channel protein type 4 subunit alpha, humanhuman

Predictions only

Length 1,836 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4AP35499 AC092647.3-201ENST00000443044 633 ntBASIC6.69□□□□□ -1.34
SCN4AP35499 TRY2P-201ENST00000448860 689 ntBASIC6.69□□□□□ -1.34
SCN4AP35499 LINC00601-201ENST00000456514 1168 ntTSL 3 BASIC6.69□□□□□ -1.34
SCN4AP35499 RN7SL385P-201ENST00000468873 276 ntBASIC6.69□□□□□ -1.34
SCN4AP35499 NDUFA5P9-201ENST00000472609 340 ntBASIC6.69□□□□□ -1.34
SCN4AP35499 OR4A40P-201ENST00000533878 948 ntBASIC6.69□□□□□ -1.34
SCN4AP35499 AC090424.1-201ENST00000535243 736 ntBASIC6.69□□□□□ -1.34
SCN4AP35499 DPPA3P2-201ENST00000553589 478 ntBASIC6.69□□□□□ -1.34
SCN4AP35499 AC127381.1-201ENST00000555979 939 ntBASIC6.69□□□□□ -1.34
SCN4AP35499 AF107885.2-202ENST00000557653 448 ntTSL 5 BASIC6.69□□□□□ -1.34
SCN4AP35499 LINC01904-201ENST00000564872 861 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
SCN4AP35499 AC209154.1-201ENST00000582156 337 ntBASIC6.69□□□□□ -1.34
SCN4AP35499 AC211433.1-206ENST00000595409 733 ntTSL 5 BASIC6.69□□□□□ -1.34
SCN4AP35499 AC027334.1-201ENST00000603257 310 ntBASIC6.69□□□□□ -1.34
SCN4AP35499 OR2M2-202ENST00000641211 1229 ntAPPRIS P1 BASIC6.69□□□□□ -1.34
SCN4AP35499 OR2M2-203ENST00000641836 1151 ntAPPRIS P1 BASIC6.69□□□□□ -1.34
SCN4AP35499 ITGA2-201ENST00000296585 7869 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
SCN4AP35499 ZFY-202ENST00000383052 5113 ntAPPRIS P1 TSL 5 BASIC6.68□□□□□ -1.34
SCN4AP35499 MAPK10-371ENST00000641952 5209 ntBASIC6.68□□□□□ -1.34
SCN4AP35499 FZD3-204ENST00000537916 13740 ntAPPRIS P1 TSL 2 BASIC6.68□□□□□ -1.34
SCN4AP35499 POLR2B-202ENST00000381227 4108 ntAPPRIS P1 TSL 5 BASIC6.68□□□□□ -1.34
SCN4AP35499 LEPROT-206ENST00000613538 4625 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
SCN4AP35499 TDO2-208ENST00000536354 1701 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
SCN4AP35499 HYDIN2-203ENST00000614586 13885 ntBASIC6.68□□□□□ -1.34
SCN4AP35499 LINC01920-201ENST00000441356 2528 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
SCN4AP35499 PHACTR4-201ENST00000373836 3107 ntAPPRIS P4 TSL 5 BASIC6.68□□□□□ -1.34
SCN4AP35499 IFRD1-217ENST00000621379 3232 ntTSL 2 BASIC6.68□□□□□ -1.34
SCN4AP35499 AL008638.3-201ENST00000623027 5182 ntBASIC6.68□□□□□ -1.34
SCN4AP35499 AP3B1-204ENST00000519295 3986 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
SCN4AP35499 MIR3681HG-201ENST00000412294 2183 ntTSL 2 BASIC6.68□□□□□ -1.34
SCN4AP35499 C1orf132-203ENST00000608023 15145 ntTSL 5 BASIC6.68□□□□□ -1.34
SCN4AP35499 TCP11-207ENST00000418521 1575 ntAPPRIS ALT2 TSL 5 BASIC6.68□□□□□ -1.34
SCN4AP35499 PSMC6-219ENST00000612399 1590 ntAPPRIS P2 TSL 1 (best) BASIC6.68□□□□□ -1.34
SCN4AP35499 KIAA0040-206ENST00000619513 4340 ntTSL 2 BASIC6.68□□□□□ -1.34
SCN4AP35499 SH3BGR-203ENST00000380634 816 ntTSL 5 BASIC6.68□□□□□ -1.34
SCN4AP35499 MANSC4-201ENST00000381273 1023 ntAPPRIS P1 TSL 5 BASIC6.68□□□□□ -1.34
SCN4AP35499 AL031123.1-201ENST00000432823 568 ntTSL 2 BASIC6.68□□□□□ -1.34
SCN4AP35499 LINC01781-202ENST00000443104 591 ntTSL 2 BASIC6.68□□□□□ -1.34
SCN4AP35499 AL022319.1-201ENST00000458183 1167 ntBASIC6.68□□□□□ -1.34
SCN4AP35499 DUBR-205ENST00000495228 411 ntTSL 2 BASIC6.68□□□□□ -1.34
SCN4AP35499 MAL2-207ENST00000522828 603 ntTSL 3 BASIC6.68□□□□□ -1.34
SCN4AP35499 AC244502.2-201ENST00000543361 851 ntBASIC6.68□□□□□ -1.34
SCN4AP35499 Z98949.1-211ENST00000596813 773 ntTSL 5 BASIC6.68□□□□□ -1.34
SCN4AP35499 AC091193.1-201ENST00000604640 448 ntBASIC6.68□□□□□ -1.34
SCN4AP35499 DUXB-201ENST00000633875 1079 ntAPPRIS P1 TSL 3 BASIC6.68□□□□□ -1.34
SCN4AP35499 OR2T29-202ENST00000641069 2637 ntAPPRIS P1 BASIC6.68□□□□□ -1.34
SCN4AP35499 WASHC4-214ENST00000620430 5807 ntAPPRIS ALT1 TSL 1 (best) BASIC6.68□□□□□ -1.34
SCN4AP35499 RIOK2-202ENST00000508447 2149 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
SCN4AP35499 NOX4-214ENST00000532825 2039 ntTSL 2 BASIC6.68□□□□□ -1.34
SCN4AP35499 CTAGE5-217ENST00000557038 2869 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
SCN4AP35499 LUZP1-203ENST00000418342 8421 ntAPPRIS P1 TSL 5 BASIC6.68□□□□□ -1.34
SCN4AP35499 TNPO1P2-201ENST00000426249 2665 ntBASIC6.68□□□□□ -1.34
SCN4AP35499 FLRT3-201ENST00000341420 3971 ntAPPRIS P1 TSL 2 BASIC6.68□□□□□ -1.34
SCN4AP35499 VIT-206ENST00000457137 1344 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
SCN4AP35499 KIF20A-205ENST00000508792 2935 ntTSL 2 BASIC6.68□□□□□ -1.34
SCN4AP35499 TMTC2-204ENST00000549919 6211 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
SCN4AP35499 ZFP37-201ENST00000374227 6266 ntAPPRIS P3 TSL 1 (best) BASIC6.67□□□□□ -1.34
SCN4AP35499 AC006511.3-201ENST00000624929 1783 ntBASIC6.67□□□□□ -1.34
SCN4AP35499 CSNK1G1-204ENST00000606793 1658 ntTSL 5 BASIC6.67□□□□□ -1.34
SCN4AP35499 THAP6-201ENST00000311638 3549 ntAPPRIS P3 TSL 1 (best) BASIC6.67□□□□□ -1.34
SCN4AP35499 ZNF184-202ENST00000377419 2899 ntAPPRIS P1 TSL 4 BASIC6.67□□□□□ -1.34
SCN4AP35499 RPL37-201ENST00000274242 7686 ntAPPRIS P2 TSL 1 (best) BASIC6.67□□□□□ -1.34
SCN4AP35499 PSG1-206ENST00000595356 1903 ntAPPRIS ALT2 TSL 1 (best) BASIC6.67□□□□□ -1.34
SCN4AP35499 FAM186A-201ENST00000327337 7127 ntAPPRIS P2 TSL 5 BASIC6.67□□□□□ -1.34
SCN4AP35499 EMC2-201ENST00000220853 1243 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
SCN4AP35499 ZNF486-201ENST00000335117 3837 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
SCN4AP35499 PPP3R1-203ENST00000409752 851 ntTSL 3 BASIC6.67□□□□□ -1.34
SCN4AP35499 RNA5SP487-201ENST00000410186 122 ntBASIC6.67□□□□□ -1.34
SCN4AP35499 AL731661.2-201ENST00000448824 806 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
SCN4AP35499 RN7SL165P-201ENST00000477476 291 ntBASIC6.67□□□□□ -1.34
SCN4AP35499 PHC3-208ENST00000481639 1075 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
SCN4AP35499 AC011396.3-201ENST00000508845 512 ntTSL 3 BASIC6.67□□□□□ -1.34
SCN4AP35499 JCHAIN-204ENST00000510437 640 ntAPPRIS P1 TSL 3 BASIC6.67□□□□□ -1.34
SCN4AP35499 RN7SKP147-201ENST00000517154 244 ntBASIC6.67□□□□□ -1.34
SCN4AP35499 AP003028.1-203ENST00000525832 444 ntTSL 3 BASIC6.67□□□□□ -1.34
SCN4AP35499 AP001267.3-204ENST00000528578 423 ntTSL 3 BASIC6.67□□□□□ -1.34
SCN4AP35499 AC073569.1-201ENST00000548469 667 ntTSL 2 BASIC6.67□□□□□ -1.34
SCN4AP35499 RPL26-204ENST00000578812 1002 ntTSL 2 BASIC6.67□□□□□ -1.34
SCN4AP35499 AP005242.1-201ENST00000583946 467 ntTSL 3 BASIC6.67□□□□□ -1.34
SCN4AP35499 OR52B4-201ENST00000624801 1124 ntAPPRIS P1 BASIC6.67□□□□□ -1.34
SCN4AP35499 SUPT3H-206ENST00000637763 498 ntTSL 3 BASIC6.67□□□□□ -1.34
SCN4AP35499 LMO7-202ENST00000341547 7237 ntAPPRIS P3 TSL 1 (best) BASIC6.67□□□□□ -1.34
SCN4AP35499 FNDC7-201ENST00000370017 3332 ntAPPRIS P1 TSL 5 BASIC6.67□□□□□ -1.34
SCN4AP35499 ZNF737-201ENST00000427401 2867 ntAPPRIS P1 TSL 2 BASIC6.67□□□□□ -1.34
SCN4AP35499 DOCK11P1-201ENST00000553480 5932 ntBASIC6.67□□□□□ -1.34
SCN4AP35499 OPRM1-215ENST00000520708 1519 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
SCN4AP35499 RRS1-AS1-201ENST00000499642 4366 ntTSL 2 BASIC6.67□□□□□ -1.34
SCN4AP35499 DTNA-227ENST00000597599 1869 ntAPPRIS ALT2 TSL 2 BASIC6.67□□□□□ -1.34
SCN4AP35499 PTPRT-209ENST00000612229 11285 ntTSL 5 BASIC6.67□□□□□ -1.34
SCN4AP35499 RAP1GDS1-206ENST00000453712 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC6.67□□□□□ -1.34
SCN4AP35499 GABRQ-201ENST00000598523 6172 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
SCN4AP35499 MCFD2-202ENST00000409105 4210 ntAPPRIS P1 TSL 5 BASIC6.67□□□□□ -1.34
SCN4AP35499 ADGRL3-206ENST00000507164 4982 ntTSL 5 BASIC6.67□□□□□ -1.34
SCN4AP35499 INTS6P1-201ENST00000504674 2530 ntBASIC6.67□□□□□ -1.34
SCN4AP35499 MAGEB16-204ENST00000399989 1818 ntAPPRIS P2 TSL 5 BASIC6.67□□□□□ -1.34
SCN4AP35499 DAZ4-207ENST00000634662 1832 ntAPPRIS ALT2 TSL 5 BASIC6.67□□□□□ -1.34
SCN4AP35499 MEIS1-209ENST00000488550 5111 ntAPPRIS ALT1 TSL 1 (best) BASIC6.67□□□□□ -1.34
SCN4AP35499 SF3B1-201ENST00000335508 6526 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
SCN4AP35499 AC123769.2-201ENST00000624332 5984 ntBASIC6.67□□□□□ -1.34
SCN4AP35499 RN7SKP113-201ENST00000363891 295 ntBASIC6.66□□□□□ -1.34
Retrieved 100 of 98,524 protein–RNA pairs in 87.1 ms