Protein–RNA interactions for Protein: P33076

CIITA, MHC class II transactivator, humanhuman

Predictions only

Length 1,130 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CIITAP33076 CPB2-AS1-201ENST00000415033 747 ntTSL 3 BASIC6.55□□□□□ -1.36
CIITAP33076 NME1P1-201ENST00000420914 382 ntBASIC6.55□□□□□ -1.36
CIITAP33076 RPS6P14-201ENST00000425165 719 ntBASIC6.55□□□□□ -1.36
CIITAP33076 HMGB1P32-201ENST00000425971 565 ntBASIC6.55□□□□□ -1.36
CIITAP33076 AC099063.1-201ENST00000437128 324 ntTSL 5 BASIC6.55□□□□□ -1.36
CIITAP33076 ITGA9-AS1-207ENST00000445429 532 ntTSL 5 BASIC6.55□□□□□ -1.36
CIITAP33076 AC087501.1-201ENST00000445617 715 ntTSL 5 BASIC6.55□□□□□ -1.36
CIITAP33076 AL500527.1-201ENST00000448532 255 ntBASIC6.55□□□□□ -1.36
CIITAP33076 RSU1P1-201ENST00000453416 441 ntBASIC6.55□□□□□ -1.36
CIITAP33076 RNU1-88P-201ENST00000459274 128 ntBASIC6.55□□□□□ -1.36
CIITAP33076 AC079080.1-201ENST00000479841 822 ntBASIC6.55□□□□□ -1.36
CIITAP33076 RN7SL273P-201ENST00000481561 299 ntBASIC6.55□□□□□ -1.36
CIITAP33076 AC022215.1-201ENST00000481770 362 ntBASIC6.55□□□□□ -1.36
CIITAP33076 RN7SL570P-201ENST00000484405 292 ntBASIC6.55□□□□□ -1.36
CIITAP33076 PPIAP19-201ENST00000486414 492 ntBASIC6.55□□□□□ -1.36
CIITAP33076 AC073610.1-201ENST00000489971 396 ntBASIC6.55□□□□□ -1.36
CIITAP33076 LINC00518-204ENST00000491317 1228 ntTSL 2 BASIC6.55□□□□□ -1.36
CIITAP33076 AC092916.1-201ENST00000497896 411 ntTSL 3 BASIC6.55□□□□□ -1.36
CIITAP33076 AC105384.2-201ENST00000508433 640 ntBASIC6.55□□□□□ -1.36
CIITAP33076 UGT2A3P7-201ENST00000510485 734 ntBASIC6.55□□□□□ -1.36
CIITAP33076 SCARNA6.1-201ENST00000516989 238 ntBASIC6.55□□□□□ -1.36
CIITAP33076 AC021678.3-201ENST00000517893 476 ntBASIC6.55□□□□□ -1.36
CIITAP33076 AC079089.1-202ENST00000528800 1256 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
CIITAP33076 GPRC5D-AS1-205ENST00000540198 404 ntTSL 5 BASIC6.55□□□□□ -1.36
CIITAP33076 LINC02327-205ENST00000550990 472 ntTSL 3 BASIC6.55□□□□□ -1.36
CIITAP33076 AC009803.1-202ENST00000551940 544 ntTSL 4 BASIC6.55□□□□□ -1.36
CIITAP33076 FRMD6-AS2-201ENST00000556617 548 ntTSL 4 BASIC6.55□□□□□ -1.36
CIITAP33076 LINC02345-203ENST00000558897 405 ntTSL 3 BASIC6.55□□□□□ -1.36
CIITAP33076 AC063977.5-201ENST00000601044 974 ntBASIC6.55□□□□□ -1.36
CIITAP33076 ASNSD1-208ENST00000607690 535 ntTSL 2 BASIC6.55□□□□□ -1.36
CIITAP33076 AL391597.1-201ENST00000618707 694 ntBASIC6.55□□□□□ -1.36
CIITAP33076 AC127024.6-201ENST00000621598 424 ntBASIC6.55□□□□□ -1.36
CIITAP33076 Metazoa_SRP.130-201ENST00000622625 267 ntBASIC6.55□□□□□ -1.36
CIITAP33076 PIGX-210ENST00000639143 831 ntAPPRIS ALT2 TSL 2 BASIC6.55□□□□□ -1.36
CIITAP33076 IGLV10-54-202ENST00000640991 351 ntTSL 5 BASIC6.55□□□□□ -1.36
CIITAP33076 MIR193BHG-214ENST00000641765 509 ntBASIC6.55□□□□□ -1.36
CIITAP33076 CALN1-203ENST00000395276 9189 ntAPPRIS P3 TSL 1 (best) BASIC6.55□□□□□ -1.36
CIITAP33076 FMN1-212ENST00000616417 13529 ntAPPRIS ALT2 TSL 5 BASIC6.55□□□□□ -1.36
CIITAP33076 DNHD1-201ENST00000254579 14862 ntAPPRIS P1 TSL 5 BASIC6.55□□□□□ -1.36
CIITAP33076 OR6C4-202ENST00000641569 5141 ntAPPRIS P1 BASIC6.55□□□□□ -1.36
CIITAP33076 ESRRG-206ENST00000366938 5274 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
CIITAP33076 CYBB-201ENST00000378588 4324 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
CIITAP33076 MRE11-203ENST00000393241 2604 ntAPPRIS ALT1 TSL 5 BASIC6.55□□□□□ -1.36
CIITAP33076 PIGN-247ENST00000640540 4720 ntTSL 5 BASIC6.55□□□□□ -1.36
CIITAP33076 DCAF8L1-201ENST00000441525 3457 ntAPPRIS P1 BASIC6.55□□□□□ -1.36
CIITAP33076 SELENOI-205ENST00000613142 8126 ntAPPRIS ALT1 TSL 5 BASIC6.55□□□□□ -1.36
CIITAP33076 ADAM21-201ENST00000603540 2658 ntAPPRIS P1 TSL 3 BASIC6.54□□□□□ -1.36
CIITAP33076 AL591135.1-201ENST00000401578 5914 ntBASIC6.54□□□□□ -1.36
CIITAP33076 THRB-IT1-201ENST00000425296 1754 ntTSL 2 BASIC6.54□□□□□ -1.36
CIITAP33076 AP4S1-212ENST00000622409 4113 ntAPPRIS P1 TSL 3 BASIC6.54□□□□□ -1.36
CIITAP33076 C6orf163-202ENST00000388923 1308 ntAPPRIS P1 TSL 5 BASIC6.54□□□□□ -1.36
CIITAP33076 LZTFL1-215ENST00000536047 4342 ntTSL 2 BASIC6.54□□□□□ -1.36
CIITAP33076 SDAD1-201ENST00000356260 3017 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
CIITAP33076 PLEKHA1-201ENST00000368988 3872 ntTSL 5 BASIC6.54□□□□□ -1.36
CIITAP33076 ZNF300P1-202ENST00000520773 3115 ntTSL 5 BASIC6.54□□□□□ -1.36
CIITAP33076 PRH2-201ENST00000381847 641 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
CIITAP33076 KRTAP29-1-201ENST00000391353 1026 ntAPPRIS P1 BASIC6.54□□□□□ -1.36
CIITAP33076 HMGB1P20-201ENST00000402555 677 ntBASIC6.54□□□□□ -1.36
CIITAP33076 AL355300.1-201ENST00000412439 187 ntTSL 3 BASIC6.54□□□□□ -1.36
CIITAP33076 TSSK4-203ENST00000428351 576 ntTSL 2 BASIC6.54□□□□□ -1.36
CIITAP33076 MRPS21P3-201ENST00000436696 262 ntBASIC6.54□□□□□ -1.36
CIITAP33076 AC016724.1-201ENST00000453215 421 ntBASIC6.54□□□□□ -1.36
CIITAP33076 AC013549.1-201ENST00000454086 566 ntTSL 3 BASIC6.54□□□□□ -1.36
CIITAP33076 RPS27AP2-201ENST00000457576 465 ntBASIC6.54□□□□□ -1.36
CIITAP33076 PEX5L-AS1-201ENST00000466064 827 ntTSL 2 BASIC6.54□□□□□ -1.36
CIITAP33076 PHC3-208ENST00000481639 1075 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
CIITAP33076 AADACP1-204ENST00000483636 1285 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
CIITAP33076 RPS3AP15-201ENST00000483874 781 ntBASIC6.54□□□□□ -1.36
CIITAP33076 CRNDE-201ENST00000501177 614 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
CIITAP33076 AC122710.1-201ENST00000510622 553 ntTSL 5 BASIC6.54□□□□□ -1.36
CIITAP33076 RNU4-18P-201ENST00000516751 149 ntBASIC6.54□□□□□ -1.36
CIITAP33076 NSMCE2-202ENST00000517315 996 ntTSL 3 BASIC6.54□□□□□ -1.36
CIITAP33076 AL157938.2-209ENST00000589128 792 ntTSL 2 BASIC6.54□□□□□ -1.36
CIITAP33076 AC008521.2-201ENST00000591021 259 ntBASIC6.54□□□□□ -1.36
CIITAP33076 AC245128.3-201ENST00000594721 748 ntBASIC6.54□□□□□ -1.36
CIITAP33076 DARS-AS1-217ENST00000599279 544 ntTSL 5 BASIC6.54□□□□□ -1.36
CIITAP33076 AL513314.2-206ENST00000617276 434 ntTSL 5 BASIC6.54□□□□□ -1.36
CIITAP33076 AC103703.1-201ENST00000634783 663 ntBASIC6.54□□□□□ -1.36
CIITAP33076 RFC1-217ENST00000639695 867 ntTSL 5 BASIC6.54□□□□□ -1.36
CIITAP33076 ZNF160-203ENST00000429604 4336 ntAPPRIS P1 TSL 3 BASIC6.54□□□□□ -1.36
CIITAP33076 TDRD5-202ENST00000367614 3632 ntAPPRIS P3 TSL 2 BASIC6.54□□□□□ -1.36
CIITAP33076 NOS1-201ENST00000317775 12158 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
CIITAP33076 C3orf35-203ENST00000425564 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC6.54□□□□□ -1.36
CIITAP33076 FAM197Y8-201ENST00000426661 2340 ntTSL 2 BASIC6.54□□□□□ -1.36
CIITAP33076 FAM197Y6-202ENST00000442145 2340 ntTSL 2 BASIC6.54□□□□□ -1.36
CIITAP33076 ALG10B-201ENST00000308742 10253 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
CIITAP33076 ZNF195-201ENST00000005082 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC6.54□□□□□ -1.36
CIITAP33076 NOL8-221ENST00000542053 3393 ntTSL 5 BASIC6.54□□□□□ -1.36
CIITAP33076 AC007842.1-201ENST00000597336 2039 ntBASIC6.54□□□□□ -1.36
CIITAP33076 RALYL-206ENST00000521376 1457 ntTSL 5 BASIC6.53□□□□□ -1.36
CIITAP33076 LINC01375-201ENST00000428485 1860 ntTSL 2 BASIC6.53□□□□□ -1.36
CIITAP33076 PREPL-216ENST00000541738 6049 ntTSL 2 BASIC6.53□□□□□ -1.36
CIITAP33076 TCF7L2-219ENST00000542695 4136 ntTSL 5 BASIC6.53□□□□□ -1.36
CIITAP33076 HORMAD2-202ENST00000403975 2115 ntAPPRIS P1 TSL 2 BASIC6.53□□□□□ -1.36
CIITAP33076 AC233968.1-201ENST00000611212 1300 ntBASIC6.53□□□□□ -1.36
CIITAP33076 AL731532.1-201ENST00000623972 4236 ntBASIC6.53□□□□□ -1.36
CIITAP33076 SLC26A3-201ENST00000340010 2863 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
CIITAP33076 TTC39C-201ENST00000304621 2304 ntAPPRIS P3 TSL 1 (best) BASIC6.53□□□□□ -1.36
CIITAP33076 CPED1-203ENST00000423795 2189 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
CIITAP33076 RLN1-201ENST00000223862 967 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
Retrieved 100 of 98,524 protein–RNA pairs in 102.8 ms