Protein–RNA interactions for Protein: P31269

HOXA9, Homeobox protein Hox-A9, humanhuman

Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA9P31269 RN7SL727P-201ENST00000482164 296 ntBASIC6.02□□□□□ -1.45
HOXA9P31269 PPP1R11P1-201ENST00000486095 376 ntBASIC6.02□□□□□ -1.45
HOXA9P31269 RN7SL30P-201ENST00000488416 306 ntBASIC6.02□□□□□ -1.45
HOXA9P31269 RPS3A-210ENST00000512690 845 ntTSL 3 BASIC6.02□□□□□ -1.45
HOXA9P31269 MIR2117-201ENST00000516780 80 ntBASIC6.02□□□□□ -1.45
HOXA9P31269 AC008536.1-201ENST00000602872 669 ntBASIC6.02□□□□□ -1.45
HOXA9P31269 AL352984.2-202ENST00000613699 155 ntBASIC6.02□□□□□ -1.45
HOXA9P31269 AC090607.5-201ENST00000615692 224 ntBASIC6.02□□□□□ -1.45
HOXA9P31269 AC021422.1-201ENST00000621212 473 ntBASIC6.02□□□□□ -1.45
HOXA9P31269 MIR6730-201ENST00000622213 67 ntBASIC6.02□□□□□ -1.45
HOXA9P31269 AC021766.1-201ENST00000624404 741 ntBASIC6.02□□□□□ -1.45
HOXA9P31269 SLC8A1-AS1-239ENST00000631142 623 ntTSL 5 BASIC6.02□□□□□ -1.45
HOXA9P31269 DLG1-213ENST00000443183 2516 ntTSL 2 BASIC6.02□□□□□ -1.45
HOXA9P31269 ZSCAN26-201ENST00000316606 2362 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
HOXA9P31269 ENKUR-201ENST00000331161 3382 ntAPPRIS P2 TSL 1 (best) BASIC6.02□□□□□ -1.45
HOXA9P31269 C9orf135-AS1-201ENST00000439418 1375 ntTSL 2 BASIC6.02□□□□□ -1.45
HOXA9P31269 ZNF699-203ENST00000591998 3358 ntAPPRIS P1 TSL 5 BASIC6.02□□□□□ -1.45
HOXA9P31269 ATXN7-208ENST00000484332 2741 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
HOXA9P31269 AC098679.1-203ENST00000505532 2227 ntTSL 2 BASIC6.02□□□□□ -1.45
HOXA9P31269 FRK-201ENST00000606080 13230 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
HOXA9P31269 KCNJ15-201ENST00000328656 8399 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
HOXA9P31269 AL592429.1-201ENST00000403909 1473 ntBASIC6.02□□□□□ -1.45
HOXA9P31269 MYBPC1-214ENST00000549145 4031 ntAPPRIS ALT2 TSL 5 BASIC6.02□□□□□ -1.45
HOXA9P31269 PABPC1P6-201ENST00000445594 1829 ntBASIC6.02□□□□□ -1.45
HOXA9P31269 GTDC1-204ENST00000392869 10514 ntAPPRIS P1 TSL 5 BASIC6.01□□□□□ -1.45
HOXA9P31269 MUC4-215ENST00000475231 16273 ntAPPRIS ALT2 TSL 5 BASIC6.01□□□□□ -1.45
HOXA9P31269 IL23R-201ENST00000347310 2912 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
HOXA9P31269 IFIT1B-201ENST00000371809 1972 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
HOXA9P31269 PIGN-220ENST00000638167 4195 ntTSL 5 BASIC6.01□□□□□ -1.45
HOXA9P31269 KIF16B-202ENST00000355755 606 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
HOXA9P31269 RNA5SP183-201ENST00000362452 119 ntBASIC6.01□□□□□ -1.45
HOXA9P31269 RNA5SP319-201ENST00000362768 119 ntBASIC6.01□□□□□ -1.45
HOXA9P31269 RNA5SP234-201ENST00000363916 119 ntBASIC6.01□□□□□ -1.45
HOXA9P31269 NIFKP3-201ENST00000417799 865 ntBASIC6.01□□□□□ -1.45
HOXA9P31269 LINC01203-201ENST00000419566 580 ntTSL 2 BASIC6.01□□□□□ -1.45
HOXA9P31269 LINC00458-201ENST00000423442 1060 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
HOXA9P31269 ALG13-AS1-201ENST00000430794 195 ntTSL 5 BASIC6.01□□□□□ -1.45
HOXA9P31269 LINC01448-201ENST00000455947 1171 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
HOXA9P31269 SLC25A51P1-201ENST00000468432 871 ntBASIC6.01□□□□□ -1.45
HOXA9P31269 LINC02040-201ENST00000481004 556 ntTSL 5 BASIC6.01□□□□□ -1.45
HOXA9P31269 AL035690.1-201ENST00000490892 383 ntBASIC6.01□□□□□ -1.45
HOXA9P31269 AC093763.2-201ENST00000505334 1223 ntBASIC6.01□□□□□ -1.45
HOXA9P31269 AC011396.3-201ENST00000508845 512 ntTSL 3 BASIC6.01□□□□□ -1.45
HOXA9P31269 AC018709.1-201ENST00000509111 700 ntAPPRIS P1 TSL 3 BASIC6.01□□□□□ -1.45
HOXA9P31269 AC006296.1-201ENST00000514401 591 ntTSL 2 BASIC6.01□□□□□ -1.45
HOXA9P31269 RN7SKP288-201ENST00000516227 268 ntBASIC6.01□□□□□ -1.45
HOXA9P31269 HNF1A-AS1-203ENST00000537361 659 ntTSL 3 BASIC6.01□□□□□ -1.45
HOXA9P31269 AC073964.1-201ENST00000558938 308 ntTSL 3 BASIC6.01□□□□□ -1.45
HOXA9P31269 ANKRD20A5P-203ENST00000580200 566 ntTSL 5 BASIC6.01□□□□□ -1.45
HOXA9P31269 LINC00663-202ENST00000586816 306 ntTSL 2 BASIC6.01□□□□□ -1.45
HOXA9P31269 AL356580.1-201ENST00000604129 159 ntTSL 5 BASIC6.01□□□□□ -1.45
HOXA9P31269 SUGT1P3-202ENST00000604259 383 ntBASIC6.01□□□□□ -1.45
HOXA9P31269 AC092944.2-201ENST00000605443 889 ntBASIC6.01□□□□□ -1.45
HOXA9P31269 AL359513.1-201ENST00000614364 557 ntBASIC6.01□□□□□ -1.45
HOXA9P31269 ASAH1-224ENST00000636269 685 ntTSL 3 BASIC6.01□□□□□ -1.45
HOXA9P31269 CACNA1E-204ENST00000367567 14757 ntAPPRIS ALT2 TSL 5 BASIC6.01□□□□□ -1.45
HOXA9P31269 AC114876.1-201ENST00000490962 1366 ntBASIC6.01□□□□□ -1.45
HOXA9P31269 OR5B2-202ENST00000641342 2184 ntAPPRIS P1 BASIC6.01□□□□□ -1.45
HOXA9P31269 NLRP11-201ENST00000589093 3417 ntAPPRIS P2 TSL 1 (best) BASIC6.01□□□□□ -1.45
HOXA9P31269 FCHSD2-201ENST00000311172 4340 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
HOXA9P31269 AC120036.2-201ENST00000509729 1474 ntBASIC6.01□□□□□ -1.45
HOXA9P31269 VPS35-201ENST00000299138 6790 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
HOXA9P31269 EEF1A1P30-201ENST00000429708 1315 ntBASIC6□□□□□ -1.45
HOXA9P31269 GPR65-201ENST00000267549 4522 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
HOXA9P31269 LRRC37B-204ENST00000543378 3091 ntAPPRIS ALT2 TSL 2 BASIC6□□□□□ -1.45
HOXA9P31269 RNF20-202ENST00000389120 3940 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
HOXA9P31269 ZNF227-208ENST00000589005 2943 ntTSL 2 BASIC6□□□□□ -1.45
HOXA9P31269 SNORA74A-201ENST00000364089 198 ntBASIC6□□□□□ -1.45
HOXA9P31269 TEX36-201ENST00000368821 922 ntAPPRIS P3 TSL 1 (best) BASIC6□□□□□ -1.45
HOXA9P31269 OR51B6-201ENST00000380219 939 ntAPPRIS P1 BASIC6□□□□□ -1.45
HOXA9P31269 MIR937-201ENST00000401271 86 ntBASIC6□□□□□ -1.45
HOXA9P31269 AL021153.1-201ENST00000427360 308 ntTSL 3 BASIC6□□□□□ -1.45
HOXA9P31269 TMEM196-204ENST00000433641 768 ntTSL 1 (best) BASIC6□□□□□ -1.45
HOXA9P31269 UBE2L5P-201ENST00000436446 465 ntAPPRIS P1 BASIC6□□□□□ -1.45
HOXA9P31269 AC096775.1-201ENST00000437724 448 ntBASIC6□□□□□ -1.45
HOXA9P31269 AL122019.1-201ENST00000438575 798 ntTSL 3 BASIC6□□□□□ -1.45
HOXA9P31269 AP000365.1-201ENST00000438850 546 ntTSL 4 BASIC6□□□□□ -1.45
HOXA9P31269 RANP1-206ENST00000455094 651 ntBASIC6□□□□□ -1.45
HOXA9P31269 AC107391.1-201ENST00000514966 412 ntTSL 2 BASIC6□□□□□ -1.45
HOXA9P31269 RN7SKP67-201ENST00000515905 235 ntBASIC6□□□□□ -1.45
HOXA9P31269 AL121594.2-201ENST00000541658 472 ntBASIC6□□□□□ -1.45
HOXA9P31269 AC244502.2-201ENST00000543361 851 ntBASIC6□□□□□ -1.45
HOXA9P31269 MORF4L1-205ENST00000558502 855 ntTSL 3 BASIC6□□□□□ -1.45
HOXA9P31269 AC007346.2-201ENST00000564816 892 ntBASIC6□□□□□ -1.45
HOXA9P31269 AL133410.1-201ENST00000574939 546 ntTSL 3 BASIC6□□□□□ -1.45
HOXA9P31269 AC005702.2-201ENST00000591035 481 ntAPPRIS P1 TSL 3 BASIC6□□□□□ -1.45
HOXA9P31269 Z98949.1-204ENST00000595102 731 ntTSL 5 BASIC6□□□□□ -1.45
HOXA9P31269 AC003682.1-201ENST00000599190 462 ntTSL 2 BASIC6□□□□□ -1.45
HOXA9P31269 BNIP3P32-201ENST00000600015 554 ntBASIC6□□□□□ -1.45
HOXA9P31269 AL512329.2-201ENST00000607350 548 ntBASIC6□□□□□ -1.45
HOXA9P31269 MLLT10-217ENST00000631589 4955 ntAPPRIS ALT2 TSL 5 BASIC6□□□□□ -1.45
HOXA9P31269 MARCH7-201ENST00000259050 5922 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
HOXA9P31269 CDC5L-201ENST00000371477 6423 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
HOXA9P31269 DLG2-207ENST00000398309 7890 ntTSL 1 (best) BASIC6□□□□□ -1.45
HOXA9P31269 SPATA17-201ENST00000366933 5818 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
HOXA9P31269 ZNF480-205ENST00000595962 4738 ntAPPRIS P3 TSL 1 (best) BASIC6□□□□□ -1.45
HOXA9P31269 VCAM1-201ENST00000294728 3083 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
HOXA9P31269 DICER1-202ENST00000393063 10220 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
HOXA9P31269 FBXL21-201ENST00000297158 1305 ntBASIC5.99□□□□□ -1.45
HOXA9P31269 LINC01568-202ENST00000555721 1325 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 93.9 ms