Protein–RNA interactions for Protein: P29400

COL4A5, Collagen alpha-5(IV) chain, humanhuman

Predictions only

Length 1,685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5P29400 C2orf73-203ENST00000405749 576 ntTSL 4 BASIC6.58□□□□□ -1.36
COL4A5P29400 AL590139.1-201ENST00000416267 400 ntBASIC6.58□□□□□ -1.36
COL4A5P29400 AL138760.1-201ENST00000423283 435 ntTSL 3 BASIC6.58□□□□□ -1.36
COL4A5P29400 AC093655.2-201ENST00000425735 631 ntBASIC6.58□□□□□ -1.36
COL4A5P29400 ARPP21-218ENST00000438071 1103 ntTSL 3 BASIC6.58□□□□□ -1.36
COL4A5P29400 MIR4432HG-202ENST00000453476 703 ntTSL 3 BASIC6.58□□□□□ -1.36
COL4A5P29400 AL445687.2-201ENST00000458156 728 ntBASIC6.58□□□□□ -1.36
COL4A5P29400 GCSAM-204ENST00000484193 1036 ntAPPRIS ALT1 TSL 2 BASIC6.58□□□□□ -1.36
COL4A5P29400 AC011389.1-201ENST00000509170 594 ntTSL 4 BASIC6.58□□□□□ -1.36
COL4A5P29400 RN7SKP253-201ENST00000516424 309 ntBASIC6.58□□□□□ -1.36
COL4A5P29400 AC134349.2-201ENST00000535136 910 ntBASIC6.58□□□□□ -1.36
COL4A5P29400 AC093799.2-201ENST00000610062 578 ntBASIC6.58□□□□□ -1.36
COL4A5P29400 Metazoa_SRP.172-201ENST00000621807 265 ntBASIC6.58□□□□□ -1.36
COL4A5P29400 AC244517.5-203ENST00000624778 517 ntTSL 2 BASIC6.58□□□□□ -1.36
COL4A5P29400 MIR7641-1-201ENST00000627518 61 ntBASIC6.58□□□□□ -1.36
COL4A5P29400 GVQW2-203ENST00000641401 327 ntAPPRIS P1 BASIC6.58□□□□□ -1.36
COL4A5P29400 ERI2-206ENST00000563117 2903 ntTSL 2 BASIC6.58□□□□□ -1.36
COL4A5P29400 ANKRD12-203ENST00000400020 9115 ntAPPRIS ALT2 TSL 1 (best) BASIC6.58□□□□□ -1.36
COL4A5P29400 OR10A2-202ENST00000641461 5390 ntAPPRIS P1 BASIC6.58□□□□□ -1.36
COL4A5P29400 CLEC7A-205ENST00000353231 2446 ntAPPRIS P3 TSL 1 (best) BASIC6.58□□□□□ -1.36
COL4A5P29400 ZNF761-203ENST00000454407 3967 ntAPPRIS P1 TSL 5 BASIC6.58□□□□□ -1.36
COL4A5P29400 CLCC1-205ENST00000369969 4343 ntTSL 5 BASIC6.57□□□□□ -1.36
COL4A5P29400 TRAM2-201ENST00000182527 6908 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
COL4A5P29400 SGO2-201ENST00000357799 4214 ntAPPRIS P2 TSL 1 (best) BASIC6.57□□□□□ -1.36
COL4A5P29400 AC022034.1-201ENST00000512867 2156 ntBASIC6.57□□□□□ -1.36
COL4A5P29400 APOL4-203ENST00000352371 3227 ntAPPRIS P4 TSL 1 (best) BASIC6.57□□□□□ -1.36
COL4A5P29400 TNPO1-201ENST00000337273 11183 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
COL4A5P29400 VEGFD-201ENST00000297904 2037 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
COL4A5P29400 CFAP54-202ENST00000524981 9766 ntAPPRIS P2 TSL 5 BASIC6.57□□□□□ -1.36
COL4A5P29400 OR8D4-201ENST00000321355 1331 ntAPPRIS P1 BASIC6.57□□□□□ -1.36
COL4A5P29400 CRYAB-201ENST00000227251 848 ntAPPRIS P1 TSL 5 BASIC6.57□□□□□ -1.36
COL4A5P29400 OR2G3-201ENST00000320002 930 ntAPPRIS P1 BASIC6.57□□□□□ -1.36
COL4A5P29400 IGLV7-43-201ENST00000390298 385 ntAPPRIS P1 BASIC6.57□□□□□ -1.36
COL4A5P29400 AC104634.1-201ENST00000452720 462 ntBASIC6.57□□□□□ -1.36
COL4A5P29400 OSTCP1-201ENST00000455507 450 ntBASIC6.57□□□□□ -1.36
COL4A5P29400 AC093267.1-201ENST00000489176 961 ntBASIC6.57□□□□□ -1.36
COL4A5P29400 AC093607.1-202ENST00000499715 559 ntTSL 4 BASIC6.57□□□□□ -1.36
COL4A5P29400 EIF3KP3-201ENST00000514461 639 ntBASIC6.57□□□□□ -1.36
COL4A5P29400 AC144548.2-201ENST00000550231 946 ntTSL 3 BASIC6.57□□□□□ -1.36
COL4A5P29400 LINS1-207ENST00000560133 1196 ntTSL 2 BASIC6.57□□□□□ -1.36
COL4A5P29400 SHMT1-211ENST00000618902 378 ntTSL 5 BASIC6.57□□□□□ -1.36
COL4A5P29400 AC109462.4-201ENST00000637882 581 ntTSL 5 BASIC6.57□□□□□ -1.36
COL4A5P29400 MT-RNR2-201ENST00000387347 1559 ntBASIC6.57□□□□□ -1.36
COL4A5P29400 AC068870.1-201ENST00000563737 2455 ntBASIC6.57□□□□□ -1.36
COL4A5P29400 ZNF724-201ENST00000418100 2764 ntAPPRIS P1 TSL 2 BASIC6.57□□□□□ -1.36
COL4A5P29400 HSPA8P14-201ENST00000552265 1805 ntBASIC6.57□□□□□ -1.36
COL4A5P29400 FANCM-201ENST00000267430 7111 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
COL4A5P29400 LINC00347-202ENST00000594461 2371 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
COL4A5P29400 TMED10-201ENST00000303575 4127 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
COL4A5P29400 AC013268.3-201ENST00000262716 2324 ntBASIC6.57□□□□□ -1.36
COL4A5P29400 AC005034.3-201ENST00000604845 1747 ntBASIC6.57□□□□□ -1.36
COL4A5P29400 AL031651.1-201ENST00000615357 1438 ntBASIC6.57□□□□□ -1.36
COL4A5P29400 ANKS1B-216ENST00000549558 2268 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
COL4A5P29400 IFT74-204ENST00000443698 2163 ntAPPRIS P1 TSL 5 BASIC6.56□□□□□ -1.36
COL4A5P29400 IRF5P1-201ENST00000504852 2164 ntBASIC6.56□□□□□ -1.36
COL4A5P29400 CUZD1-205ENST00000368904 2903 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
COL4A5P29400 GOLGB1-201ENST00000340645 11187 ntAPPRIS P3 TSL 1 (best) BASIC6.56□□□□□ -1.36
COL4A5P29400 LINC02119-201ENST00000508853 2573 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
COL4A5P29400 RNA5SP505-201ENST00000364748 108 ntBASIC6.56□□□□□ -1.36
COL4A5P29400 AL359378.2-201ENST00000415575 746 ntTSL 2 BASIC6.56□□□□□ -1.36
COL4A5P29400 AL591468.1-201ENST00000417932 573 ntTSL 3 BASIC6.56□□□□□ -1.36
COL4A5P29400 AC019050.1-201ENST00000418508 492 ntBASIC6.56□□□□□ -1.36
COL4A5P29400 NANOGP9-201ENST00000439890 892 ntBASIC6.56□□□□□ -1.36
COL4A5P29400 GAPDHP25-201ENST00000447061 1001 ntBASIC6.56□□□□□ -1.36
COL4A5P29400 DUBR-205ENST00000495228 411 ntTSL 2 BASIC6.56□□□□□ -1.36
COL4A5P29400 AC127526.3-201ENST00000534291 450 ntTSL 3 BASIC6.56□□□□□ -1.36
COL4A5P29400 AC092112.1-201ENST00000538329 640 ntTSL 3 BASIC6.56□□□□□ -1.36
COL4A5P29400 AC092364.1-202ENST00000593824 565 ntTSL 4 BASIC6.56□□□□□ -1.36
COL4A5P29400 AC015660.5-201ENST00000623238 564 ntBASIC6.56□□□□□ -1.36
COL4A5P29400 AC112694.2-201ENST00000623697 768 ntBASIC6.56□□□□□ -1.36
COL4A5P29400 SYNE3-205ENST00000557275 13488 ntAPPRIS ALT1 TSL 2 BASIC6.56□□□□□ -1.36
COL4A5P29400 KLHL5-203ENST00000381930 3288 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
COL4A5P29400 SH3D19-201ENST00000304527 5273 ntAPPRIS P3 TSL 2 BASIC6.56□□□□□ -1.36
COL4A5P29400 IKZF2-201ENST00000342002 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC6.56□□□□□ -1.36
COL4A5P29400 SLC15A2-205ENST00000489711 5673 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
COL4A5P29400 LINC00704-201ENST00000430998 1478 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
COL4A5P29400 KIAA1958-203ENST00000536272 7650 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
COL4A5P29400 AL359195.2-201ENST00000623657 4412 ntBASIC6.56□□□□□ -1.36
COL4A5P29400 AL589993.1-201ENST00000407450 2524 ntBASIC6.56□□□□□ -1.36
COL4A5P29400 SPOCK1-201ENST00000282223 4488 ntTSL 5 BASIC6.56□□□□□ -1.36
COL4A5P29400 AGBL1-201ENST00000441037 3551 ntAPPRIS ALT2 TSL 5 BASIC6.56□□□□□ -1.36
COL4A5P29400 ZNF300P1-202ENST00000520773 3115 ntTSL 5 BASIC6.56□□□□□ -1.36
COL4A5P29400 MMACHC-201ENST00000401061 5296 ntAPPRIS P1 TSL 2 BASIC6.56□□□□□ -1.36
COL4A5P29400 GABRR1-203ENST00000454853 2820 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
COL4A5P29400 ELSPBP1-201ENST00000339841 1052 ntAPPRIS P2 TSL 1 (best) BASIC6.55□□□□□ -1.36
COL4A5P29400 MIR192-201ENST00000384915 110 ntBASIC6.55□□□□□ -1.36
COL4A5P29400 MGAT2P2-201ENST00000427194 797 ntBASIC6.55□□□□□ -1.36
COL4A5P29400 AL133268.3-201ENST00000428903 577 ntTSL 5 BASIC6.55□□□□□ -1.36
COL4A5P29400 FSIP2-AS1-201ENST00000429929 440 ntTSL 3 BASIC6.55□□□□□ -1.36
COL4A5P29400 ARPP21-215ENST00000432682 1015 ntTSL 5 BASIC6.55□□□□□ -1.36
COL4A5P29400 AC008072.1-201ENST00000434254 824 ntBASIC6.55□□□□□ -1.36
COL4A5P29400 FSIP2-AS1-202ENST00000436557 689 ntTSL 3 BASIC6.55□□□□□ -1.36
COL4A5P29400 LINC01645-201ENST00000451341 491 ntTSL 3 BASIC6.55□□□□□ -1.36
COL4A5P29400 HNRNPDLP2-201ENST00000455248 751 ntBASIC6.55□□□□□ -1.36
COL4A5P29400 NECTIN3-AS1-205ENST00000491709 792 ntTSL 3 BASIC6.55□□□□□ -1.36
COL4A5P29400 AP001267.3-204ENST00000528578 423 ntTSL 3 BASIC6.55□□□□□ -1.36
COL4A5P29400 AC005000.1-201ENST00000536192 288 ntBASIC6.55□□□□□ -1.36
COL4A5P29400 AC009117.1-201ENST00000563948 554 ntBASIC6.55□□□□□ -1.36
COL4A5P29400 MVP-219ENST00000629059 120 ntTSL 5 BASIC6.55□□□□□ -1.36
COL4A5P29400 LINC00700-201ENST00000413603 2097 ntTSL 2 BASIC6.55□□□□□ -1.36
Retrieved 100 of 98,524 protein–RNA pairs in 105 ms