Protein–RNA interactions for Protein: P28068

HLA-DMB, HLA class II histocompatibility antigen, DM beta chain, humanhuman

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMBP28068 AC144530.1-201ENST00000452862 555 ntBASIC4.4□□□□□ -1.71
HLA-DMBP28068 AC099344.3-201ENST00000454489 626 ntTSL 3 BASIC4.4□□□□□ -1.71
HLA-DMBP28068 AC105021.1-201ENST00000455347 590 ntTSL 3 BASIC4.4□□□□□ -1.71
HLA-DMBP28068 AC068631.1-205ENST00000455926 409 ntTSL 3 BASIC4.4□□□□□ -1.71
HLA-DMBP28068 ATP5J-207ENST00000457143 589 ntTSL 2 BASIC4.4□□□□□ -1.71
HLA-DMBP28068 AL122019.1-202ENST00000458070 546 ntTSL 5 BASIC4.4□□□□□ -1.71
HLA-DMBP28068 LINC02360-201ENST00000506195 657 ntTSL 3 BASIC4.4□□□□□ -1.71
HLA-DMBP28068 MOCS2-206ENST00000510818 1251 ntTSL 5 BASIC4.4□□□□□ -1.71
HLA-DMBP28068 LINC02506-201ENST00000513211 734 ntTSL 3 BASIC4.4□□□□□ -1.71
HLA-DMBP28068 AC027343.2-201ENST00000513219 343 ntTSL 3 BASIC4.4□□□□□ -1.71
HLA-DMBP28068 IGKV3D-25-201ENST00000519599 235 ntBASIC4.4□□□□□ -1.71
HLA-DMBP28068 IGLV3-30-201ENST00000524362 298 ntBASIC4.4□□□□□ -1.71
HLA-DMBP28068 OR4A42P-201ENST00000531397 938 ntBASIC4.4□□□□□ -1.71
HLA-DMBP28068 AC103996.3-201ENST00000553477 442 ntTSL 3 BASIC4.4□□□□□ -1.71
HLA-DMBP28068 AC020704.1-201ENST00000559394 454 ntTSL 3 BASIC4.4□□□□□ -1.71
HLA-DMBP28068 TMEM159-205ENST00000572599 713 ntAPPRIS P1 TSL 5 BASIC4.4□□□□□ -1.71
HLA-DMBP28068 AC010401.3-201ENST00000576600 582 ntTSL 4 BASIC4.4□□□□□ -1.71
HLA-DMBP28068 AP005119.1-201ENST00000580956 292 ntBASIC4.4□□□□□ -1.71
HLA-DMBP28068 MOCS2-210ENST00000584946 736 ntTSL 5 BASIC4.4□□□□□ -1.71
HLA-DMBP28068 AC243967.1-201ENST00000598976 578 ntAPPRIS P1 TSL 5 BASIC4.4□□□□□ -1.71
HLA-DMBP28068 ZNF208-204ENST00000599916 740 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
HLA-DMBP28068 AC006363.1-201ENST00000603806 463 ntBASIC4.4□□□□□ -1.71
HLA-DMBP28068 AL365181.4-201ENST00000609800 547 ntBASIC4.4□□□□□ -1.71
HLA-DMBP28068 AL136228.1-201ENST00000622221 319 ntBASIC4.4□□□□□ -1.71
HLA-DMBP28068 AC129778.1-202ENST00000623812 261 ntBASIC4.4□□□□□ -1.71
HLA-DMBP28068 AL591379.1-207ENST00000635982 261 ntBASIC4.4□□□□□ -1.71
HLA-DMBP28068 AMYH02020865.1-205ENST00000636189 261 ntBASIC4.4□□□□□ -1.71
HLA-DMBP28068 AL391117.1-201ENST00000640003 1186 ntTSL 5 BASIC4.4□□□□□ -1.71
HLA-DMBP28068 PLS3-201ENST00000289290 2277 ntTSL 2 BASIC4.4□□□□□ -1.71
HLA-DMBP28068 AC007750.1-202ENST00000418968 4098 ntTSL 5 BASIC4.4□□□□□ -1.71
HLA-DMBP28068 BICRAL-201ENST00000314073 6530 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
HLA-DMBP28068 AK9-204ENST00000424296 6326 ntAPPRIS P1 TSL 5 BASIC4.4□□□□□ -1.71
HLA-DMBP28068 GEN1-202ENST00000381254 6367 ntAPPRIS P1 TSL 5 BASIC4.4□□□□□ -1.71
HLA-DMBP28068 AC012254.3-201ENST00000591183 2117 ntBASIC4.4□□□□□ -1.71
HLA-DMBP28068 OR5AQ1P-203ENST00000641818 1529 ntBASIC4.4□□□□□ -1.71
HLA-DMBP28068 SLC9B1P1-201ENST00000331172 1337 ntBASIC4.4□□□□□ -1.71
HLA-DMBP28068 ANGPTL5-201ENST00000334289 2368 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
HLA-DMBP28068 LINC01677-205ENST00000635636 2362 ntTSL 5 BASIC4.4□□□□□ -1.71
HLA-DMBP28068 ZNF260-204ENST00000592282 5055 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
HLA-DMBP28068 CCDC169-204ENST00000379864 5944 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
HLA-DMBP28068 SLFN5-201ENST00000299977 10591 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
HLA-DMBP28068 IFT52-202ENST00000373039 1599 ntAPPRIS P1 TSL 5 BASIC4.4□□□□□ -1.71
HLA-DMBP28068 LARP4-203ENST00000398473 6427 ntAPPRIS P3 TSL 1 (best) BASIC4.4□□□□□ -1.71
HLA-DMBP28068 AC004158.1-201ENST00000564508 4319 ntBASIC4.4□□□□□ -1.71
HLA-DMBP28068 CTAGE5-217ENST00000557038 2869 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
HLA-DMBP28068 LINC00615-201ENST00000546725 1406 ntTSL 2 BASIC4.39□□□□□ -1.71
HLA-DMBP28068 NOVA1-213ENST00000574031 1431 ntTSL 2 BASIC4.39□□□□□ -1.71
HLA-DMBP28068 DYRK1A-202ENST00000339659 8654 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
HLA-DMBP28068 AC109446.4-201ENST00000623235 2755 ntBASIC4.39□□□□□ -1.71
HLA-DMBP28068 PDE4D-202ENST00000317118 2599 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
HLA-DMBP28068 PPP1R9A-206ENST00000433360 5369 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
HLA-DMBP28068 MECOM-201ENST00000264674 4900 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
HLA-DMBP28068 OR51G2-202ENST00000641926 3326 ntAPPRIS P1 BASIC4.39□□□□□ -1.71
HLA-DMBP28068 SCN2A-201ENST00000283256 8660 ntAPPRIS P5 TSL 1 (best) BASIC4.39□□□□□ -1.71
HLA-DMBP28068 TAF13-201ENST00000338366 813 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
HLA-DMBP28068 PTPN20-208ENST00000395727 790 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
HLA-DMBP28068 TMBIM4-203ENST00000398033 844 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
HLA-DMBP28068 BTBD9-203ENST00000403056 1155 ntTSL 5 BASIC4.39□□□□□ -1.71
HLA-DMBP28068 KIF4CP-201ENST00000422742 1279 ntBASIC4.39□□□□□ -1.71
HLA-DMBP28068 HNRNPA1P29-201ENST00000426409 879 ntBASIC4.39□□□□□ -1.71
HLA-DMBP28068 ATP6V1E1P1-201ENST00000439215 681 ntBASIC4.39□□□□□ -1.71
HLA-DMBP28068 BMS1P10-201ENST00000443754 1120 ntBASIC4.39□□□□□ -1.71
HLA-DMBP28068 AL353804.1-201ENST00000444482 451 ntTSL 5 BASIC4.39□□□□□ -1.71
HLA-DMBP28068 ACA64.1-201ENST00000459171 127 ntBASIC4.39□□□□□ -1.71
HLA-DMBP28068 RNU1-88P-201ENST00000459274 128 ntBASIC4.39□□□□□ -1.71
HLA-DMBP28068 AC023245.1-201ENST00000468501 517 ntBASIC4.39□□□□□ -1.71
HLA-DMBP28068 PHC3-208ENST00000481639 1075 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
HLA-DMBP28068 AC008443.2-201ENST00000499096 566 ntTSL 2 BASIC4.39□□□□□ -1.71
HLA-DMBP28068 AC004069.1-201ENST00000504082 549 ntTSL 4 BASIC4.39□□□□□ -1.71
HLA-DMBP28068 UGT2A3P7-201ENST00000510485 734 ntBASIC4.39□□□□□ -1.71
HLA-DMBP28068 AC010260.1-201ENST00000511484 664 ntTSL 3 BASIC4.39□□□□□ -1.71
HLA-DMBP28068 AC091185.1-201ENST00000523840 528 ntTSL 3 BASIC4.39□□□□□ -1.71
HLA-DMBP28068 AC090692.1-202ENST00000525363 607 ntTSL 4 BASIC4.39□□□□□ -1.71
HLA-DMBP28068 AC134511.1-201ENST00000535721 192 ntTSL 3 BASIC4.39□□□□□ -1.71
HLA-DMBP28068 TCEANC-205ENST00000544987 1146 ntTSL 5 BASIC4.39□□□□□ -1.71
HLA-DMBP28068 AC012555.2-201ENST00000549448 413 ntTSL 3 BASIC4.39□□□□□ -1.71
HLA-DMBP28068 INO80-AS1-201ENST00000558967 312 ntTSL 5 BASIC4.39□□□□□ -1.71
HLA-DMBP28068 AC087286.2-201ENST00000558980 660 ntTSL 3 BASIC4.39□□□□□ -1.71
HLA-DMBP28068 AC018558.1-201ENST00000562591 459 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
HLA-DMBP28068 AC087501.3-201ENST00000576477 513 ntTSL 5 BASIC4.39□□□□□ -1.71
HLA-DMBP28068 AL589935.1-223ENST00000587015 808 ntTSL 5 BASIC4.39□□□□□ -1.71
HLA-DMBP28068 AL136084.2-212ENST00000589976 654 ntTSL 5 BASIC4.39□□□□□ -1.71
HLA-DMBP28068 AC010503.3-201ENST00000594355 540 ntBASIC4.39□□□□□ -1.71
HLA-DMBP28068 AL117336.3-201ENST00000603160 1107 ntTSL 3 BASIC4.39□□□□□ -1.71
HLA-DMBP28068 AL096712.1-201ENST00000614561 159 ntBASIC4.39□□□□□ -1.71
HLA-DMBP28068 AC245014.3-201ENST00000618589 347 ntBASIC4.39□□□□□ -1.71
HLA-DMBP28068 AC092683.1-207ENST00000620051 837 ntTSL 2 BASIC4.39□□□□□ -1.71
HLA-DMBP28068 PCBP1-AS1-282ENST00000625783 826 ntTSL 5 BASIC4.39□□□□□ -1.71
HLA-DMBP28068 AC079776.5-201ENST00000641920 211 ntBASIC4.39□□□□□ -1.71
HLA-DMBP28068 SCN2A-203ENST00000375437 8792 ntAPPRIS ALT1 TSL 5 BASIC4.39□□□□□ -1.71
HLA-DMBP28068 PINCR-201ENST00000440955 2228 ntTSL 2 BASIC4.39□□□□□ -1.71
HLA-DMBP28068 ZNF677-201ENST00000333952 3422 ntAPPRIS P1 TSL 2 BASIC4.39□□□□□ -1.71
HLA-DMBP28068 SLFN12L-205ENST00000628453 1767 ntAPPRIS ALT2 TSL 5 BASIC4.39□□□□□ -1.71
HLA-DMBP28068 PDE10A-203ENST00000539869 4401 ntAPPRIS ALT2 TSL 1 (best) BASIC4.39□□□□□ -1.71
HLA-DMBP28068 KIAA1841-205ENST00000453873 4294 ntAPPRIS P1 TSL 5 BASIC4.39□□□□□ -1.71
HLA-DMBP28068 ZFX-211ENST00000539115 6801 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
HLA-DMBP28068 SPATA5-201ENST00000274008 8137 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
HLA-DMBP28068 AC007557.3-201ENST00000418591 3135 ntTSL 2 BASIC4.39□□□□□ -1.71
HLA-DMBP28068 CASC15-207ENST00000607048 1634 ntTSL 2 BASIC4.39□□□□□ -1.71
HLA-DMBP28068 CFL2-201ENST00000298159 6747 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 149 ms