Protein–RNA interactions for Protein: P22362

CCL1, C-C motif chemokine 1, humanhuman

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL1P22362 HIF1AN-201ENST00000299163 13011 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
CCL1P22362 RFC1-201ENST00000349703 4859 ntAPPRIS P3 TSL 1 (best) BASIC4.84□□□□□ -1.63
CCL1P22362 RFC1-202ENST00000381897 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC4.84□□□□□ -1.63
CCL1P22362 AKAP6-212ENST00000557272 4601 ntTSL 5 BASIC4.84□□□□□ -1.63
CCL1P22362 CD96-202ENST00000352690 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC4.84□□□□□ -1.63
CCL1P22362 HDAC9-203ENST00000406072 4102 ntTSL 5 BASIC4.84□□□□□ -1.63
CCL1P22362 AC007750.1-202ENST00000418968 4098 ntTSL 5 BASIC4.84□□□□□ -1.63
CCL1P22362 VPS50-202ENST00000305866 3613 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
CCL1P22362 LYVE1-201ENST00000256178 3273 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
CCL1P22362 RRM1-201ENST00000300738 3076 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
CCL1P22362 AP001605.1-201ENST00000420186 2603 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
CCL1P22362 EPS8-207ENST00000540613 2204 ntTSL 2 BASIC4.84□□□□□ -1.63
CCL1P22362 DCN-202ENST00000393155 2133 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
CCL1P22362 GLYATL1-201ENST00000300079 2068 ntAPPRIS P3 TSL 2 BASIC4.84□□□□□ -1.63
CCL1P22362 GTF2IP4-201ENST00000453092 2054 ntBASIC4.84□□□□□ -1.63
CCL1P22362 DBT-201ENST00000370131 1521 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
CCL1P22362 SLMAP-208ENST00000449503 4027 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
CCL1P22362 INSIG2-208ENST00000614681 1347 ntTSL 5 BASIC4.84□□□□□ -1.63
CCL1P22362 ATP1B4-201ENST00000218008 3868 ntAPPRIS ALT1 TSL 1 (best) BASIC4.84□□□□□ -1.63
CCL1P22362 IGLV3-10-201ENST00000390315 382 ntAPPRIS P1 BASIC4.84□□□□□ -1.63
CCL1P22362 LSM5-203ENST00000409782 649 ntTSL 5 BASIC4.84□□□□□ -1.63
CCL1P22362 AC007161.1-204ENST00000423039 460 ntBASIC4.84□□□□□ -1.63
CCL1P22362 AL353608.2-201ENST00000425587 340 ntTSL 5 BASIC4.84□□□□□ -1.63
CCL1P22362 RPL7P56-201ENST00000429441 717 ntBASIC4.84□□□□□ -1.63
CCL1P22362 AC008063.2-201ENST00000432251 619 ntTSL 2 BASIC4.84□□□□□ -1.63
CCL1P22362 AMYP1-201ENST00000440059 1023 ntBASIC4.84□□□□□ -1.63
CCL1P22362 AL590764.1-201ENST00000450860 726 ntTSL 3 BASIC4.84□□□□□ -1.63
CCL1P22362 AL359839.1-201ENST00000451975 1160 ntBASIC4.84□□□□□ -1.63
CCL1P22362 AC099344.3-201ENST00000454489 626 ntTSL 3 BASIC4.84□□□□□ -1.63
CCL1P22362 AC104339.1-201ENST00000465478 348 ntBASIC4.84□□□□□ -1.63
CCL1P22362 AC122718.2-201ENST00000505325 591 ntBASIC4.84□□□□□ -1.63
CCL1P22362 AC105919.1-201ENST00000507203 393 ntTSL 3 BASIC4.84□□□□□ -1.63
CCL1P22362 AC018680.1-201ENST00000513332 875 ntTSL 3 BASIC4.84□□□□□ -1.63
CCL1P22362 OR5H7P-201ENST00000514084 930 ntBASIC4.84□□□□□ -1.63
CCL1P22362 AC026894.1-201ENST00000532930 850 ntTSL 3 BASIC4.84□□□□□ -1.63
CCL1P22362 DPPA2P4-201ENST00000563717 878 ntBASIC4.84□□□□□ -1.63
CCL1P22362 AC090403.1-204ENST00000582893 572 ntTSL 4 BASIC4.84□□□□□ -1.63
CCL1P22362 AL683826.1-201ENST00000624104 627 ntBASIC4.84□□□□□ -1.63
CCL1P22362 PIGX-210ENST00000639143 831 ntAPPRIS ALT2 TSL 2 BASIC4.84□□□□□ -1.63
CCL1P22362 C1orf27-201ENST00000287859 3792 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
CCL1P22362 EPHA4-202ENST00000409854 3454 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
CCL1P22362 PCAT19-201ENST00000588495 3472 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
CCL1P22362 SLC1A2-203ENST00000395753 11689 ntAPPRIS ALT1 TSL 2 BASIC4.84□□□□□ -1.63
CCL1P22362 SYNJ2BP-201ENST00000256366 7015 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
CCL1P22362 MKKS-202ENST00000399054 2663 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
CCL1P22362 PTPRD-205ENST00000397611 8242 ntTSL 5 BASIC4.84□□□□□ -1.64
CCL1P22362 NHSL2-204ENST00000631375 12593 ntTSL 5 BASIC4.84□□□□□ -1.64
CCL1P22362 RIMS2-209ENST00000507740 8002 ntTSL 1 (best) BASIC4.84□□□□□ -1.64
CCL1P22362 OR6C4-203ENST00000641851 4989 ntAPPRIS P1 BASIC4.84□□□□□ -1.64
CCL1P22362 SMARCE1-208ENST00000474246 2124 ntTSL 1 (best) BASIC4.84□□□□□ -1.64
CCL1P22362 ABI2-204ENST00000295851 22209 ntTSL 1 (best) BASIC4.84□□□□□ -1.64
CCL1P22362 AL355306.2-206ENST00000635233 1903 ntTSL 5 BASIC4.84□□□□□ -1.64
CCL1P22362 PTBP3-207ENST00000458258 7995 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
CCL1P22362 CYP2C8-210ENST00000535898 1799 ntTSL 2 BASIC4.83□□□□□ -1.64
CCL1P22362 FHL1-218ENST00000543669 2878 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
CCL1P22362 MYO5A-201ENST00000356338 11971 ntAPPRIS ALT1 TSL 1 (best) BASIC4.83□□□□□ -1.64
CCL1P22362 MATR3-230ENST00000394800 5513 ntTSL 5 BASIC4.83□□□□□ -1.64
CCL1P22362 CAP1P2-201ENST00000417455 1409 ntBASIC4.83□□□□□ -1.64
CCL1P22362 MTX3-204ENST00000617335 6155 ntTSL 2 BASIC4.83□□□□□ -1.64
CCL1P22362 OR10G4-203ENST00000641722 3301 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
CCL1P22362 OR52A5-201ENST00000307388 3973 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
CCL1P22362 OR52A5-202ENST00000642125 3993 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
CCL1P22362 CLEC2D-201ENST00000261339 465 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
CCL1P22362 OR11H6-201ENST00000315519 993 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
CCL1P22362 TMSB4XP2-201ENST00000335179 210 ntBASIC4.83□□□□□ -1.64
CCL1P22362 RN7SKP69-201ENST00000365390 305 ntBASIC4.83□□□□□ -1.64
CCL1P22362 SUGT1P2-201ENST00000379452 992 ntBASIC4.83□□□□□ -1.64
CCL1P22362 SNORA5.1-201ENST00000384275 131 ntBASIC4.83□□□□□ -1.64
CCL1P22362 AL009179.1-201ENST00000406085 265 ntBASIC4.83□□□□□ -1.64
CCL1P22362 AL445190.1-201ENST00000416448 288 ntTSL 5 BASIC4.83□□□□□ -1.64
CCL1P22362 HAO2-IT1-201ENST00000419144 311 ntTSL 5 BASIC4.83□□□□□ -1.64
CCL1P22362 NME1P1-201ENST00000420914 382 ntBASIC4.83□□□□□ -1.64
CCL1P22362 SETP9-201ENST00000423837 832 ntBASIC4.83□□□□□ -1.64
CCL1P22362 AL136131.2-201ENST00000424283 348 ntTSL 3 BASIC4.83□□□□□ -1.64
CCL1P22362 AC023481.1-201ENST00000435368 938 ntTSL 3 BASIC4.83□□□□□ -1.64
CCL1P22362 AL358876.1-201ENST00000453364 1075 ntBASIC4.83□□□□□ -1.64
CCL1P22362 CBX1P2-201ENST00000453841 458 ntBASIC4.83□□□□□ -1.64
CCL1P22362 AC118758.1-202ENST00000454719 225 ntBASIC4.83□□□□□ -1.64
CCL1P22362 TAAR4P-201ENST00000454843 1039 ntBASIC4.83□□□□□ -1.64
CCL1P22362 AC092349.1-201ENST00000504903 310 ntBASIC4.83□□□□□ -1.64
CCL1P22362 AC010451.1-201ENST00000509057 556 ntTSL 3 BASIC4.83□□□□□ -1.64
CCL1P22362 AC008592.4-201ENST00000509999 450 ntTSL 3 BASIC4.83□□□□□ -1.64
CCL1P22362 CENPK-210ENST00000510354 1124 ntTSL 5 BASIC4.83□□□□□ -1.64
CCL1P22362 ANAPC10-213ENST00000512680 505 ntTSL 3 BASIC4.83□□□□□ -1.64
CCL1P22362 RNU4ATAC18P-201ENST00000516179 126 ntBASIC4.83□□□□□ -1.64
CCL1P22362 RN7SKP183-201ENST00000517169 324 ntBASIC4.83□□□□□ -1.64
CCL1P22362 DCN-210ENST00000547568 823 ntTSL 3 BASIC4.83□□□□□ -1.64
CCL1P22362 AC090109.1-201ENST00000548885 819 ntTSL 3 BASIC4.83□□□□□ -1.64
CCL1P22362 AC055874.1-201ENST00000561458 479 ntTSL 2 BASIC4.83□□□□□ -1.64
CCL1P22362 AC027216.1-201ENST00000577726 685 ntBASIC4.83□□□□□ -1.64
CCL1P22362 AC090227.1-201ENST00000590532 936 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
CCL1P22362 RMDN2-AS1-203ENST00000601029 613 ntTSL 5 BASIC4.83□□□□□ -1.64
CCL1P22362 AC243654.3-201ENST00000617427 735 ntTSL 5 BASIC4.83□□□□□ -1.64
CCL1P22362 AL031665.2-201ENST00000620712 209 ntTSL 3 BASIC4.83□□□□□ -1.64
CCL1P22362 uc_338.7-201ENST00000621834 124 ntBASIC4.83□□□□□ -1.64
CCL1P22362 LINC02033-201ENST00000623207 971 ntTSL 2 BASIC4.83□□□□□ -1.64
CCL1P22362 AC129778.1-202ENST00000623812 261 ntBASIC4.83□□□□□ -1.64
CCL1P22362 PCBP1-AS1-286ENST00000625888 765 ntTSL 5 BASIC4.83□□□□□ -1.64
CCL1P22362 AL591379.1-207ENST00000635982 261 ntBASIC4.83□□□□□ -1.64
CCL1P22362 AMYH02020865.1-205ENST00000636189 261 ntBASIC4.83□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 85.4 ms