Protein–RNA interactions for Protein: P20700

LMNB1, Lamin-B1, humanhuman

Predictions only

Length 586 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1P20700 AL157400.1-201ENST00000428166 368 ntTSL 5 BASIC7.85□□□□□ -1.15
LMNB1P20700 GNGT1-203ENST00000429473 538 ntAPPRIS P1 TSL 1 (best) BASIC7.85□□□□□ -1.15
LMNB1P20700 LINC01857-201ENST00000429730 492 ntTSL 2 BASIC7.85□□□□□ -1.15
LMNB1P20700 AL022310.1-201ENST00000436974 690 ntTSL 2 BASIC7.85□□□□□ -1.15
LMNB1P20700 AL139161.2-201ENST00000438371 740 ntTSL 3 BASIC7.85□□□□□ -1.15
LMNB1P20700 AC092168.1-201ENST00000443030 236 ntTSL 5 BASIC7.85□□□□□ -1.15
LMNB1P20700 AC099342.1-201ENST00000446399 1124 ntTSL 3 BASIC7.85□□□□□ -1.15
LMNB1P20700 AL133351.3-201ENST00000454998 193 ntBASIC7.85□□□□□ -1.15
LMNB1P20700 LINC01072-201ENST00000455848 431 ntTSL 3 BASIC7.85□□□□□ -1.15
LMNB1P20700 RN7SL369P-201ENST00000477138 299 ntBASIC7.85□□□□□ -1.15
LMNB1P20700 AC063943.2-201ENST00000495697 534 ntBASIC7.85□□□□□ -1.15
LMNB1P20700 AC008443.2-201ENST00000499096 566 ntTSL 2 BASIC7.85□□□□□ -1.15
LMNB1P20700 AC026719.1-201ENST00000506059 456 ntTSL 3 BASIC7.85□□□□□ -1.15
LMNB1P20700 LINC02466-202ENST00000509105 653 ntTSL 3 BASIC7.85□□□□□ -1.15
LMNB1P20700 NPY1R-204ENST00000509586 1017 ntTSL 2 BASIC7.85□□□□□ -1.15
LMNB1P20700 AC021193.1-201ENST00000511607 420 ntBASIC7.85□□□□□ -1.15
LMNB1P20700 AC114781.3-201ENST00000512083 142 ntBASIC7.85□□□□□ -1.15
LMNB1P20700 AC112191.2-201ENST00000522428 333 ntBASIC7.85□□□□□ -1.15
LMNB1P20700 AC079600.1-201ENST00000550326 297 ntBASIC7.85□□□□□ -1.15
LMNB1P20700 DUXAP6-201ENST00000553858 601 ntBASIC7.85□□□□□ -1.15
LMNB1P20700 AC009558.2-201ENST00000558258 396 ntTSL 2 BASIC7.85□□□□□ -1.15
LMNB1P20700 AC025918.2-201ENST00000558683 763 ntBASIC7.85□□□□□ -1.15
LMNB1P20700 AC027808.1-201ENST00000560873 683 ntTSL 3 BASIC7.85□□□□□ -1.15
LMNB1P20700 AC009094.1-201ENST00000564443 426 ntBASIC7.85□□□□□ -1.15
LMNB1P20700 AC010735.1-201ENST00000567305 1026 ntBASIC7.85□□□□□ -1.15
LMNB1P20700 AC124283.4-201ENST00000581815 456 ntBASIC7.85□□□□□ -1.15
LMNB1P20700 ZRANB2-AS2-212ENST00000590186 686 ntTSL 5 BASIC7.85□□□□□ -1.15
LMNB1P20700 CCDC58P3-201ENST00000590792 430 ntBASIC7.85□□□□□ -1.15
LMNB1P20700 ZNF528-211ENST00000598192 625 ntTSL 3 BASIC7.85□□□□□ -1.15
LMNB1P20700 MTCO3P22-201ENST00000603219 784 ntBASIC7.85□□□□□ -1.15
LMNB1P20700 QTRT1P1-201ENST00000604344 1078 ntBASIC7.85□□□□□ -1.15
LMNB1P20700 AC025588.2-201ENST00000604851 466 ntBASIC7.85□□□□□ -1.15
LMNB1P20700 AC092142.2-201ENST00000614642 354 ntTSL 3 BASIC7.85□□□□□ -1.15
LMNB1P20700 AL512652.1-201ENST00000619006 500 ntBASIC7.85□□□□□ -1.15
LMNB1P20700 AP000577.1-201ENST00000624366 878 ntBASIC7.85□□□□□ -1.15
LMNB1P20700 AL157778.1-201ENST00000626665 729 ntTSL 3 BASIC7.85□□□□□ -1.15
LMNB1P20700 AL358154.1-201ENST00000627075 444 ntTSL 3 BASIC7.85□□□□□ -1.15
LMNB1P20700 LINC01440-210ENST00000629744 541 ntTSL 5 BASIC7.85□□□□□ -1.15
LMNB1P20700 AC099329.1-203ENST00000629885 767 ntTSL 5 BASIC7.85□□□□□ -1.15
LMNB1P20700 FRG1EP-201ENST00000634469 770 ntBASIC7.85□□□□□ -1.15
LMNB1P20700 MIR3974-201ENST00000637126 96 ntBASIC7.85□□□□□ -1.15
LMNB1P20700 NDC80-201ENST00000261597 2172 ntAPPRIS P1 TSL 1 (best) BASIC7.85□□□□□ -1.15
LMNB1P20700 IFT80-225ENST00000496589 3073 ntTSL 2 BASIC7.85□□□□□ -1.15
LMNB1P20700 SH3D19-210ENST00000514152 5107 ntAPPRIS ALT1 TSL 2 BASIC7.85□□□□□ -1.15
LMNB1P20700 AL353743.3-201ENST00000442109 1468 ntBASIC7.85□□□□□ -1.15
LMNB1P20700 RGPD3-201ENST00000304514 5510 ntAPPRIS ALT2 TSL 2 BASIC7.85□□□□□ -1.15
LMNB1P20700 ALPK2-201ENST00000361673 7303 ntAPPRIS P1 TSL 1 (best) BASIC7.85□□□□□ -1.15
LMNB1P20700 CTNND1-218ENST00000528232 5745 ntTSL 1 (best) BASIC7.85□□□□□ -1.15
LMNB1P20700 LINC01602-201ENST00000522992 2109 ntTSL 1 (best) BASIC7.85□□□□□ -1.15
LMNB1P20700 NOX4-211ENST00000528341 1899 ntTSL 2 BASIC7.85□□□□□ -1.15
LMNB1P20700 AC023245.2-201ENST00000530760 2978 ntBASIC7.85□□□□□ -1.15
LMNB1P20700 UVRAG-205ENST00000528420 2463 ntTSL 2 BASIC7.85□□□□□ -1.15
LMNB1P20700 STIL-203ENST00000371877 5009 ntAPPRIS ALT2 TSL 1 (best) BASIC7.85□□□□□ -1.15
LMNB1P20700 BUB1-202ENST00000409311 3287 ntTSL 1 (best) BASIC7.84□□□□□ -1.15
LMNB1P20700 OSGEPL1-207ENST00000522700 1779 ntAPPRIS P1 TSL 1 (best) BASIC7.84□□□□□ -1.15
LMNB1P20700 ZNF214-204ENST00000536068 2562 ntAPPRIS P1 TSL 1 (best) BASIC7.84□□□□□ -1.15
LMNB1P20700 AC034111.1-201ENST00000562143 3770 ntBASIC7.84□□□□□ -1.15
LMNB1P20700 ARHGAP28-201ENST00000262227 5369 ntAPPRIS ALT2 TSL 1 (best) BASIC7.84□□□□□ -1.15
LMNB1P20700 ZNF14-201ENST00000344099 2949 ntAPPRIS P1 TSL 1 (best) BASIC7.84□□□□□ -1.15
LMNB1P20700 DLG2-230ENST00000532653 2891 ntAPPRIS ALT2 TSL 1 (best) BASIC7.84□□□□□ -1.15
LMNB1P20700 SMAD1-202ENST00000394092 1658 ntAPPRIS P1 TSL 1 (best) BASIC7.84□□□□□ -1.15
LMNB1P20700 ZNF484-204ENST00000395506 4031 ntTSL 3 BASIC7.84□□□□□ -1.15
LMNB1P20700 EMC2-201ENST00000220853 1243 ntAPPRIS P1 TSL 1 (best) BASIC7.84□□□□□ -1.15
LMNB1P20700 RPL9-201ENST00000295955 750 ntAPPRIS P1 TSL 1 (best) BASIC7.84□□□□□ -1.15
LMNB1P20700 RNA5SP443-201ENST00000363083 132 ntBASIC7.84□□□□□ -1.15
LMNB1P20700 Y_RNA.169-201ENST00000363745 96 ntBASIC7.84□□□□□ -1.15
LMNB1P20700 KRTAP29-1-201ENST00000391353 1026 ntAPPRIS P1 BASIC7.84□□□□□ -1.15
LMNB1P20700 SEPT7P8-201ENST00000413308 775 ntBASIC7.84□□□□□ -1.15
LMNB1P20700 AC093157.2-201ENST00000414686 671 ntTSL 5 BASIC7.84□□□□□ -1.15
LMNB1P20700 AL596247.1-201ENST00000416076 442 ntTSL 3 BASIC7.84□□□□□ -1.15
LMNB1P20700 LANCL1-AS1-201ENST00000416344 714 ntTSL 3 BASIC7.84□□□□□ -1.15
LMNB1P20700 SOS1-IT1-201ENST00000420644 539 ntTSL 5 BASIC7.84□□□□□ -1.15
LMNB1P20700 OR5M12P-201ENST00000423388 929 ntBASIC7.84□□□□□ -1.15
LMNB1P20700 AC093422.3-201ENST00000428506 305 ntBASIC7.84□□□□□ -1.15
LMNB1P20700 HIGD1AP4-201ENST00000430194 280 ntBASIC7.84□□□□□ -1.15
LMNB1P20700 MORF4L1P5-201ENST00000433352 961 ntBASIC7.84□□□□□ -1.15
LMNB1P20700 AC064862.4-201ENST00000442180 334 ntBASIC7.84□□□□□ -1.15
LMNB1P20700 AL512785.1-201ENST00000447899 517 ntTSL 3 BASIC7.84□□□□□ -1.15
LMNB1P20700 AL157371.1-201ENST00000451910 394 ntTSL 3 BASIC7.84□□□□□ -1.15
LMNB1P20700 NAALADL2-AS3-202ENST00000453180 413 ntTSL 3 BASIC7.84□□□□□ -1.15
LMNB1P20700 AL023581.2-201ENST00000454588 552 ntTSL 2 BASIC7.84□□□□□ -1.15
LMNB1P20700 RN7SL515P-201ENST00000463999 297 ntBASIC7.84□□□□□ -1.15
LMNB1P20700 AC021074.2-201ENST00000468434 172 ntBASIC7.84□□□□□ -1.15
LMNB1P20700 FAM104B-204ENST00000472571 1109 ntAPPRIS ALT2 TSL 1 (best) BASIC7.84□□□□□ -1.15
LMNB1P20700 EFCAB10-203ENST00000480514 740 ntAPPRIS ALT1 TSL 1 (best) BASIC7.84□□□□□ -1.15
LMNB1P20700 Metazoa_SRP.158-201ENST00000487171 294 ntBASIC7.84□□□□□ -1.15
LMNB1P20700 AC100802.1-201ENST00000519197 1026 ntTSL 3 BASIC7.84□□□□□ -1.15
LMNB1P20700 IGHV4-55-201ENST00000520889 368 ntBASIC7.84□□□□□ -1.15
LMNB1P20700 KBTBD3-204ENST00000531482 874 ntTSL 3 BASIC7.84□□□□□ -1.15
LMNB1P20700 AC063926.1-201ENST00000539532 415 ntTSL 2 BASIC7.84□□□□□ -1.15
LMNB1P20700 C3orf14-207ENST00000542214 768 ntAPPRIS P1 TSL 1 (best) BASIC7.84□□□□□ -1.15
LMNB1P20700 AC008147.3-201ENST00000548666 354 ntBASIC7.84□□□□□ -1.15
LMNB1P20700 AC089998.2-201ENST00000551856 277 ntTSL 3 BASIC7.84□□□□□ -1.15
LMNB1P20700 AC090607.1-201ENST00000560057 449 ntTSL 3 BASIC7.84□□□□□ -1.15
LMNB1P20700 AC036103.1-201ENST00000563846 823 ntTSL 5 BASIC7.84□□□□□ -1.15
LMNB1P20700 AP005136.1-201ENST00000579765 429 ntBASIC7.84□□□□□ -1.15
LMNB1P20700 AC011824.3-201ENST00000585093 563 ntTSL 4 BASIC7.84□□□□□ -1.15
LMNB1P20700 AC007673.1-201ENST00000590604 1100 ntTSL 5 BASIC7.84□□□□□ -1.15
LMNB1P20700 ZNF283-207ENST00000593164 1260 ntTSL 1 (best) BASIC7.84□□□□□ -1.15
LMNB1P20700 AL132655.1-201ENST00000601795 1153 ntTSL 3 BASIC7.84□□□□□ -1.15
Retrieved 100 of 98,524 protein–RNA pairs in 86.2 ms