Protein–RNA interactions for Protein: P06400

RB1, Retinoblastoma-associated protein, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RB1P06400 HMGN2P47-201ENST00000559378 272 ntBASIC6.3□□□□□ -1.4
RB1P06400 DPPA2P4-201ENST00000563717 878 ntBASIC6.3□□□□□ -1.4
RB1P06400 AC015720.2-201ENST00000567709 334 ntBASIC6.3□□□□□ -1.4
RB1P06400 ODF4-202ENST00000584943 804 ntAPPRIS ALT2 TSL 1 (best) BASIC6.3□□□□□ -1.4
RB1P06400 AC006504.7-201ENST00000592806 924 ntTSL 3 BASIC6.3□□□□□ -1.4
RB1P06400 FKBP1AP1-201ENST00000594588 318 ntBASIC6.3□□□□□ -1.4
RB1P06400 Z98949.1-210ENST00000597548 766 ntTSL 5 BASIC6.3□□□□□ -1.4
RB1P06400 AL513314.2-202ENST00000617077 536 ntTSL 5 BASIC6.3□□□□□ -1.4
RB1P06400 METTL15-211ENST00000634762 718 ntTSL 5 BASIC6.3□□□□□ -1.4
RB1P06400 AP000550.3-201ENST00000637734 379 ntBASIC6.3□□□□□ -1.4
RB1P06400 AXDND1-201ENST00000367618 3642 ntAPPRIS P2 TSL 1 (best) BASIC6.3□□□□□ -1.4
RB1P06400 CCDC129-211ENST00000615280 4142 ntAPPRIS ALT2 TSL 2 BASIC6.3□□□□□ -1.4
RB1P06400 OFD1P8Y-201ENST00000449148 1433 ntBASIC6.3□□□□□ -1.4
RB1P06400 CAMK2D-202ENST00000342666 1940 ntTSL 5 BASIC6.3□□□□□ -1.4
RB1P06400 CDC42BPA-201ENST00000334218 10134 ntTSL 5 BASIC6.3□□□□□ -1.4
RB1P06400 OSBPL9-205ENST00000447887 2940 ntTSL 2 BASIC6.3□□□□□ -1.4
RB1P06400 LINC01297-204ENST00000621052 4222 ntTSL 5 BASIC6.3□□□□□ -1.4
RB1P06400 AC005034.3-201ENST00000604845 1747 ntBASIC6.3□□□□□ -1.4
RB1P06400 TNPO1P2-201ENST00000426249 2665 ntBASIC6.3□□□□□ -1.4
RB1P06400 ALG10B-201ENST00000308742 10253 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
RB1P06400 TAF7L-203ENST00000372907 2341 ntAPPRIS P3 TSL 1 (best) BASIC6.3□□□□□ -1.4
RB1P06400 CLIP4-202ENST00000401605 2322 ntTSL 2 BASIC6.3□□□□□ -1.4
RB1P06400 FANCD2-205ENST00000431693 2450 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
RB1P06400 NSD1-201ENST00000347982 7688 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
RB1P06400 SEMA3A-204ENST00000436949 2550 ntAPPRIS P1 TSL 5 BASIC6.29□□□□□ -1.4
RB1P06400 AL592429.1-201ENST00000403909 1473 ntBASIC6.29□□□□□ -1.4
RB1P06400 OR5T1-202ENST00000641665 1471 ntAPPRIS P1 BASIC6.29□□□□□ -1.4
RB1P06400 YES1P1-201ENST00000418510 1628 ntBASIC6.29□□□□□ -1.4
RB1P06400 AMOT-206ENST00000524145 3330 ntAPPRIS ALT2 TSL 5 BASIC6.29□□□□□ -1.4
RB1P06400 AC096921.2-201ENST00000561507 1916 ntBASIC6.29□□□□□ -1.4
RB1P06400 ACOD1-202ENST00000449753 2097 ntAPPRIS ALT2 TSL 3 BASIC6.29□□□□□ -1.4
RB1P06400 TEX41-210ENST00000451774 2098 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
RB1P06400 TTC37-201ENST00000358746 5706 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
RB1P06400 YTHDC1-207ENST00000579690 2983 ntAPPRIS ALT2 TSL 5 BASIC6.29□□□□□ -1.4
RB1P06400 ZNF254-208ENST00000616028 3886 ntTSL 4 BASIC6.29□□□□□ -1.4
RB1P06400 CASP10-202ENST00000286186 5928 ntAPPRIS P4 TSL 1 (best) BASIC6.29□□□□□ -1.4
RB1P06400 EXD1-201ENST00000314992 2942 ntAPPRIS P3 TSL 1 (best) BASIC6.29□□□□□ -1.4
RB1P06400 ELMOD2-201ENST00000323570 4409 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
RB1P06400 RNU4-23P-201ENST00000362839 140 ntBASIC6.29□□□□□ -1.4
RB1P06400 RAET1L-202ENST00000367341 1285 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
RB1P06400 CAV1-204ENST00000393470 598 ntTSL 4 BASIC6.29□□□□□ -1.4
RB1P06400 GTF3C3-202ENST00000409364 1736 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
RB1P06400 AC099677.3-201ENST00000427081 395 ntBASIC6.29□□□□□ -1.4
RB1P06400 LINC01501-201ENST00000427523 409 ntTSL 3 BASIC6.29□□□□□ -1.4
RB1P06400 RPL34P27-201ENST00000428810 349 ntBASIC6.29□□□□□ -1.4
RB1P06400 Z98257.1-202ENST00000431027 2493 ntTSL 5 BASIC6.29□□□□□ -1.4
RB1P06400 AL139280.1-201ENST00000436340 463 ntTSL 3 BASIC6.29□□□□□ -1.4
RB1P06400 AL450996.1-201ENST00000445574 1202 ntBASIC6.29□□□□□ -1.4
RB1P06400 OR6C72P-201ENST00000451403 892 ntBASIC6.29□□□□□ -1.4
RB1P06400 FRG2FP-204ENST00000453982 852 ntBASIC6.29□□□□□ -1.4
RB1P06400 RAB28P2-201ENST00000454299 641 ntBASIC6.29□□□□□ -1.4
RB1P06400 RN7SL352P-201ENST00000466002 277 ntBASIC6.29□□□□□ -1.4
RB1P06400 RPL23AP40-201ENST00000487630 390 ntBASIC6.29□□□□□ -1.4
RB1P06400 AC117386.2-203ENST00000489690 557 ntTSL 3 BASIC6.29□□□□□ -1.4
RB1P06400 AC007370.1-201ENST00000503163 316 ntTSL 2 BASIC6.29□□□□□ -1.4
RB1P06400 PTPRO-208ENST00000542557 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC6.29□□□□□ -1.4
RB1P06400 AL049874.4-201ENST00000557593 255 ntBASIC6.29□□□□□ -1.4
RB1P06400 AC009145.2-201ENST00000562685 377 ntTSL 3 BASIC6.29□□□□□ -1.4
RB1P06400 AL157831.2-201ENST00000564681 3095 ntBASIC6.29□□□□□ -1.4
RB1P06400 AL583832.1-201ENST00000603227 784 ntBASIC6.29□□□□□ -1.4
RB1P06400 Z98949.1-220ENST00000609809 804 ntTSL 5 BASIC6.29□□□□□ -1.4
RB1P06400 AC008115.4-201ENST00000619780 775 ntBASIC6.29□□□□□ -1.4
RB1P06400 AC022919.1-201ENST00000624979 626 ntBASIC6.29□□□□□ -1.4
RB1P06400 AL359094.1-201ENST00000627944 566 ntTSL 5 BASIC6.29□□□□□ -1.4
RB1P06400 LINC01708-202ENST00000634316 859 ntTSL 5 BASIC6.29□□□□□ -1.4
RB1P06400 NUMB-204ENST00000535282 3198 ntAPPRIS ALT1 TSL 5 BASIC6.29□□□□□ -1.4
RB1P06400 ARMCX5-201ENST00000246174 2899 ntAPPRIS P1 TSL 2 BASIC6.29□□□□□ -1.4
RB1P06400 AC006213.6-201ENST00000623722 4179 ntBASIC6.29□□□□□ -1.4
RB1P06400 BPIFC-204ENST00000534972 1809 ntTSL 5 BASIC6.29□□□□□ -1.4
RB1P06400 XRCC5-201ENST00000392132 3428 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
RB1P06400 RALYL-211ENST00000523850 1684 ntTSL 2 BASIC6.29□□□□□ -1.4
RB1P06400 ZNF813-201ENST00000396403 6151 ntAPPRIS P1 TSL 3 BASIC6.29□□□□□ -1.4
RB1P06400 CLEC12A-205ENST00000434319 1515 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
RB1P06400 CCDC18-AS1-205ENST00000421202 2973 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
RB1P06400 ZNF254-207ENST00000613065 4244 ntTSL 3 BASIC6.29□□□□□ -1.4
RB1P06400 AFP-201ENST00000226359 1914 ntTSL 5 BASIC6.29□□□□□ -1.4
RB1P06400 KLHL41-201ENST00000284669 2464 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
RB1P06400 VNN2-206ENST00000525270 1608 ntAPPRIS ALT2 TSL 2 BASIC6.28□□□□□ -1.4
RB1P06400 DAZ2-203ENST00000382424 3853 ntAPPRIS ALT2 TSL 5 BASIC6.28□□□□□ -1.4
RB1P06400 SH3D19-201ENST00000304527 5273 ntAPPRIS P3 TSL 2 BASIC6.28□□□□□ -1.4
RB1P06400 AL662795.2-201ENST00000624252 3706 ntBASIC6.28□□□□□ -1.4
RB1P06400 NEGR1-202ENST00000357731 12811 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
RB1P06400 SAMMSON-210ENST00000641260 1308 ntBASIC6.28□□□□□ -1.4
RB1P06400 KLHL13-202ENST00000371876 5331 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
RB1P06400 LMO3-235ENST00000616247 3227 ntTSL 5 BASIC6.28□□□□□ -1.4
RB1P06400 CD200R1L-204ENST00000488794 1597 ntAPPRIS ALT2 TSL 5 BASIC6.28□□□□□ -1.4
RB1P06400 STAU2-210ENST00000521210 1950 ntTSL 2 BASIC6.28□□□□□ -1.4
RB1P06400 PABPC1P6-201ENST00000445594 1829 ntBASIC6.28□□□□□ -1.4
RB1P06400 AGBL4-201ENST00000334103 881 ntTSL 5 BASIC6.28□□□□□ -1.4
RB1P06400 EEF1A1P29-201ENST00000416082 1096 ntBASIC6.28□□□□□ -1.4
RB1P06400 AC113412.1-201ENST00000425840 504 ntBASIC6.28□□□□□ -1.4
RB1P06400 AC006455.6-201ENST00000426192 893 ntBASIC6.28□□□□□ -1.4
RB1P06400 MIR646HG-202ENST00000426753 651 ntTSL 2 BASIC6.28□□□□□ -1.4
RB1P06400 FMO7P-201ENST00000436045 768 ntBASIC6.28□□□□□ -1.4
RB1P06400 AL354793.1-201ENST00000446028 713 ntTSL 3 BASIC6.28□□□□□ -1.4
RB1P06400 HMGN1P8-201ENST00000463578 288 ntBASIC6.28□□□□□ -1.4
RB1P06400 LINC01332-201ENST00000506612 502 ntTSL 4 BASIC6.28□□□□□ -1.4
RB1P06400 GOLGA5P1-201ENST00000507317 980 ntBASIC6.28□□□□□ -1.4
RB1P06400 AC018709.1-201ENST00000509111 700 ntAPPRIS P1 TSL 3 BASIC6.28□□□□□ -1.4
RB1P06400 SCARNA6.1-201ENST00000516989 238 ntBASIC6.28□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 73.4 ms