Protein–RNA interactions for Protein: P02462

COL4A1, Collagen alpha-1(IV) chain, humanhuman

Predictions only

Length 1,669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A1P02462 TRBV2-201ENST00000455382 421 ntAPPRIS P1 BASIC6.65□□□□□ -1.35
COL4A1P02462 FTH1P8-201ENST00000498161 514 ntBASIC6.65□□□□□ -1.35
COL4A1P02462 LINC02499-201ENST00000502291 763 ntTSL 3 BASIC6.65□□□□□ -1.35
COL4A1P02462 RPL37-204ENST00000508493 553 ntAPPRIS ALT1 TSL 1 (best) BASIC6.65□□□□□ -1.35
COL4A1P02462 AC010230.1-201ENST00000514115 443 ntTSL 3 BASIC6.65□□□□□ -1.35
COL4A1P02462 AP005436.1-201ENST00000531454 488 ntTSL 2 BASIC6.65□□□□□ -1.35
COL4A1P02462 HAGLR-211ENST00000549329 609 ntTSL 4 BASIC6.65□□□□□ -1.35
COL4A1P02462 U1.25-201ENST00000614085 162 ntBASIC6.65□□□□□ -1.35
COL4A1P02462 U1.34-201ENST00000618578 162 ntBASIC6.65□□□□□ -1.35
COL4A1P02462 PXT1-202ENST00000619547 619 ntAPPRIS ALT2 TSL 1 (best) BASIC6.65□□□□□ -1.35
COL4A1P02462 U1.31-201ENST00000620022 160 ntBASIC6.65□□□□□ -1.35
COL4A1P02462 AP002799.1-201ENST00000623552 423 ntBASIC6.65□□□□□ -1.35
COL4A1P02462 ZNF521-203ENST00000538137 4253 ntAPPRIS P1 TSL 2 BASIC6.64□□□□□ -1.35
COL4A1P02462 RBBP4-202ENST00000373493 7943 ntAPPRIS P3 TSL 1 (best) BASIC6.64□□□□□ -1.35
COL4A1P02462 DTNA-204ENST00000348997 4518 ntAPPRIS P3 TSL 1 (best) BASIC6.64□□□□□ -1.35
COL4A1P02462 LINC01361-202ENST00000452834 1526 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
COL4A1P02462 TXNRD1-205ENST00000503506 3930 ntAPPRIS P2 TSL 1 (best) BASIC6.64□□□□□ -1.35
COL4A1P02462 GPRIN3-202ENST00000609438 14244 ntAPPRIS P1 TSL 2 BASIC6.64□□□□□ -1.35
COL4A1P02462 NFIB-218ENST00000636432 1953 ntTSL 5 BASIC6.64□□□□□ -1.35
COL4A1P02462 CLASP1-202ENST00000397587 7915 ntTSL 5 BASIC6.64□□□□□ -1.35
COL4A1P02462 NAV2-203ENST00000396085 11000 ntAPPRIS P4 TSL 5 BASIC6.64□□□□□ -1.35
COL4A1P02462 CASP8-203ENST00000323492 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC6.64□□□□□ -1.35
COL4A1P02462 MTOR-202ENST00000376838 4017 ntTSL 2 BASIC6.64□□□□□ -1.35
COL4A1P02462 KIAA1841-205ENST00000453873 4294 ntAPPRIS P1 TSL 5 BASIC6.64□□□□□ -1.35
COL4A1P02462 ZCCHC2-204ENST00000586834 4765 ntAPPRIS ALT2 TSL 1 (best) BASIC6.64□□□□□ -1.35
COL4A1P02462 ENTPD1-205ENST00000453258 5044 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
COL4A1P02462 EPB41L2-220ENST00000528282 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC6.64□□□□□ -1.35
COL4A1P02462 MAVS-201ENST00000416600 11596 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
COL4A1P02462 CFAP57-208ENST00000610710 4162 ntTSL 5 BASIC6.64□□□□□ -1.35
COL4A1P02462 PAICS-201ENST00000264221 3339 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
COL4A1P02462 DNM1L-203ENST00000381000 4397 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
COL4A1P02462 HMGB1-203ENST00000341423 5485 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
COL4A1P02462 LRBA-209ENST00000510413 10032 ntAPPRIS ALT2 TSL 1 (best) BASIC6.64□□□□□ -1.35
COL4A1P02462 FCHSD2-201ENST00000311172 4340 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
COL4A1P02462 NPM1-202ENST00000351986 1237 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
COL4A1P02462 RNA5SP487-201ENST00000410186 122 ntBASIC6.64□□□□□ -1.35
COL4A1P02462 RPS26P38-201ENST00000414476 348 ntBASIC6.64□□□□□ -1.35
COL4A1P02462 KRT8P51-201ENST00000438938 274 ntBASIC6.64□□□□□ -1.35
COL4A1P02462 RPL34P20-201ENST00000442771 351 ntBASIC6.64□□□□□ -1.35
COL4A1P02462 CENPK-210ENST00000510354 1124 ntTSL 5 BASIC6.64□□□□□ -1.35
COL4A1P02462 AAGAB-203ENST00000542650 1015 ntTSL 2 BASIC6.64□□□□□ -1.35
COL4A1P02462 UBL5-207ENST00000590068 390 ntAPPRIS P1 TSL 5 BASIC6.64□□□□□ -1.35
COL4A1P02462 NANOGP3-201ENST00000605855 286 ntBASIC6.64□□□□□ -1.35
COL4A1P02462 AC087632.1-216ENST00000625619 487 ntAPPRIS P1 TSL 3 BASIC6.64□□□□□ -1.35
COL4A1P02462 USP37-205ENST00000454775 5019 ntAPPRIS P1 TSL 2 BASIC6.64□□□□□ -1.35
COL4A1P02462 TMPRSS11BNL-202ENST00000510782 3202 ntTSL 2 BASIC6.64□□□□□ -1.35
COL4A1P02462 IL1RAP-202ENST00000317757 5413 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
COL4A1P02462 ALKBH3-AS1-201ENST00000499194 1906 ntTSL 2 BASIC6.63□□□□□ -1.35
COL4A1P02462 AC112255.1-201ENST00000624070 2493 ntBASIC6.63□□□□□ -1.35
COL4A1P02462 ESRRG-205ENST00000366937 5365 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
COL4A1P02462 ZNF224-201ENST00000336976 3980 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
COL4A1P02462 KCNMB2-204ENST00000432997 2552 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
COL4A1P02462 KLRD1-203ENST00000350274 3165 ntAPPRIS ALT2 TSL 1 (best) BASIC6.63□□□□□ -1.35
COL4A1P02462 AC006288.1-201ENST00000565320 1463 ntTSL 3 BASIC6.63□□□□□ -1.35
COL4A1P02462 MOSPD2-201ENST00000380492 4163 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
COL4A1P02462 LGALS8-220ENST00000526634 1852 ntAPPRIS ALT2 TSL 5 BASIC6.63□□□□□ -1.35
COL4A1P02462 CLASP2-213ENST00000480013 5972 ntTSL 5 BASIC6.63□□□□□ -1.35
COL4A1P02462 SLC12A1-202ENST00000380993 4707 ntAPPRIS P3 TSL 5 BASIC6.63□□□□□ -1.35
COL4A1P02462 SNORA17.1-201ENST00000362945 126 ntBASIC6.63□□□□□ -1.35
COL4A1P02462 LINC02476-202ENST00000431071 559 ntTSL 4 BASIC6.63□□□□□ -1.35
COL4A1P02462 SDCBP-205ENST00000447267 772 ntTSL 3 BASIC6.63□□□□□ -1.35
COL4A1P02462 RPS3AP41-201ENST00000462701 778 ntBASIC6.63□□□□□ -1.35
COL4A1P02462 ST13P12-201ENST00000508958 1094 ntBASIC6.63□□□□□ -1.35
COL4A1P02462 AC013644.1-202ENST00000523166 499 ntTSL 2 BASIC6.63□□□□□ -1.35
COL4A1P02462 OR4A43P-201ENST00000532938 908 ntBASIC6.63□□□□□ -1.35
COL4A1P02462 AC134349.2-201ENST00000535136 910 ntBASIC6.63□□□□□ -1.35
COL4A1P02462 USP3-AS1-202ENST00000559357 455 ntTSL 2 BASIC6.63□□□□□ -1.35
COL4A1P02462 POU1F1-203ENST00000560656 647 ntTSL 5 BASIC6.63□□□□□ -1.35
COL4A1P02462 AP005230.1-203ENST00000582086 887 ntTSL 2 BASIC6.63□□□□□ -1.35
COL4A1P02462 GMFG-202ENST00000594700 397 ntTSL 2 BASIC6.63□□□□□ -1.35
COL4A1P02462 LINC00254-202ENST00000633813 439 ntTSL 3 BASIC6.63□□□□□ -1.35
COL4A1P02462 MYOCOS-202ENST00000636788 1039 ntAPPRIS ALT2 TSL 5 BASIC6.63□□□□□ -1.35
COL4A1P02462 ACACA-231ENST00000614428 9554 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
COL4A1P02462 FGF13-201ENST00000305414 1939 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
COL4A1P02462 BPIFC-201ENST00000300399 1980 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
COL4A1P02462 ZNF320-205ENST00000595635 6448 ntAPPRIS P1 TSL 2 BASIC6.63□□□□□ -1.35
COL4A1P02462 OR52N5-202ENST00000641181 2778 ntAPPRIS P1 BASIC6.63□□□□□ -1.35
COL4A1P02462 CCAR1-217ENST00000543719 3521 ntTSL 5 BASIC6.63□□□□□ -1.35
COL4A1P02462 AP004243.1-201ENST00000529108 1433 ntAPPRIS P1 TSL 5 BASIC6.63□□□□□ -1.35
COL4A1P02462 NEDD9-202ENST00000379446 4536 ntAPPRIS P3 TSL 1 (best) BASIC6.63□□□□□ -1.35
COL4A1P02462 RUFY3-202ENST00000381006 3098 ntAPPRIS P1 TSL 5 BASIC6.62□□□□□ -1.35
COL4A1P02462 RPTN-201ENST00000316073 3569 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
COL4A1P02462 CACNB4-239ENST00000636947 5575 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
COL4A1P02462 NDUFA4-201ENST00000339600 2130 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
COL4A1P02462 RNA5SP87-201ENST00000384155 118 ntBASIC6.62□□□□□ -1.35
COL4A1P02462 AL645733.1-201ENST00000402250 217 ntBASIC6.62□□□□□ -1.35
COL4A1P02462 AL360081.1-201ENST00000428299 555 ntBASIC6.62□□□□□ -1.35
COL4A1P02462 ATP13A4-AS1-202ENST00000431512 394 ntTSL 3 BASIC6.62□□□□□ -1.35
COL4A1P02462 PARGP1-202ENST00000440803 790 ntTSL 2 BASIC6.62□□□□□ -1.35
COL4A1P02462 AL451063.1-201ENST00000450164 1133 ntBASIC6.62□□□□□ -1.35
COL4A1P02462 AC068489.1-201ENST00000453706 261 ntTSL 5 BASIC6.62□□□□□ -1.35
COL4A1P02462 AL035446.1-201ENST00000455011 453 ntTSL 5 BASIC6.62□□□□□ -1.35
COL4A1P02462 AC108161.1-201ENST00000461060 402 ntBASIC6.62□□□□□ -1.35
COL4A1P02462 AC016651.1-201ENST00000502680 822 ntTSL 3 BASIC6.62□□□□□ -1.35
COL4A1P02462 CDH12P4-201ENST00000517835 295 ntBASIC6.62□□□□□ -1.35
COL4A1P02462 CDH12P3-201ENST00000517935 295 ntBASIC6.62□□□□□ -1.35
COL4A1P02462 CDH12P1-201ENST00000518435 295 ntBASIC6.62□□□□□ -1.35
COL4A1P02462 AP001922.4-201ENST00000526967 290 ntBASIC6.62□□□□□ -1.35
COL4A1P02462 ATPAF1-210ENST00000532925 998 ntTSL 2 BASIC6.62□□□□□ -1.35
COL4A1P02462 AC027667.1-201ENST00000545814 304 ntBASIC6.62□□□□□ -1.35
Retrieved 100 of 98,524 protein–RNA pairs in 137.3 ms