Protein–RNA interactions for Protein: P02452

COL1A1, Collagen alpha-1(I) chain, humanhuman

Predicted RBP Predictions only

Length 1,464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1P02452 TMEM196-203ENST00000422233 775 ntTSL 5 BASIC6.75□□□□□ -1.33
COL1A1P02452 AL157834.1-201ENST00000422744 420 ntTSL 3 BASIC6.75□□□□□ -1.33
COL1A1P02452 AC108075.1-201ENST00000424692 529 ntBASIC6.75□□□□□ -1.33
COL1A1P02452 AL390879.1-201ENST00000439143 386 ntBASIC6.75□□□□□ -1.33
COL1A1P02452 RPL7P45-201ENST00000455851 743 ntBASIC6.75□□□□□ -1.33
COL1A1P02452 AC115223.1-201ENST00000466377 870 ntBASIC6.75□□□□□ -1.33
COL1A1P02452 AC004453.1-201ENST00000487895 408 ntBASIC6.75□□□□□ -1.33
COL1A1P02452 MYLK-AS2-201ENST00000510827 500 ntTSL 3 BASIC6.75□□□□□ -1.33
COL1A1P02452 AC040914.1-201ENST00000518674 318 ntTSL 3 BASIC6.75□□□□□ -1.33
COL1A1P02452 LINC02310-201ENST00000556762 572 ntTSL 4 BASIC6.75□□□□□ -1.33
COL1A1P02452 LINC02345-203ENST00000558897 405 ntTSL 3 BASIC6.75□□□□□ -1.33
COL1A1P02452 AL049539.1-201ENST00000611964 459 ntBASIC6.75□□□□□ -1.33
COL1A1P02452 AP003789.1-201ENST00000617737 605 ntBASIC6.75□□□□□ -1.33
COL1A1P02452 LINC02246-206ENST00000630211 712 ntTSL 5 BASIC6.75□□□□□ -1.33
COL1A1P02452 ZNF462-201ENST00000277225 10414 ntAPPRIS P2 TSL 1 (best) BASIC6.75□□□□□ -1.33
COL1A1P02452 AC006206.1-201ENST00000544842 3387 ntBASIC6.75□□□□□ -1.33
COL1A1P02452 GBA3-206ENST00000610628 2154 ntAPPRIS ALT2 TSL 5 BASIC6.75□□□□□ -1.33
COL1A1P02452 AL162456.1-201ENST00000634535 2006 ntBASIC6.75□□□□□ -1.33
COL1A1P02452 RBMS2-201ENST00000262031 8382 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
COL1A1P02452 RBPJ-202ENST00000342320 5761 ntAPPRIS P3 TSL 1 (best) BASIC6.75□□□□□ -1.33
COL1A1P02452 SLC9A6-212ENST00000637195 4858 ntTSL 5 BASIC6.75□□□□□ -1.33
COL1A1P02452 FAM240A-201ENST00000444264 1826 ntAPPRIS P2 TSL 2 BASIC6.75□□□□□ -1.33
COL1A1P02452 FAM240A-202ENST00000640551 1826 ntAPPRIS ALT2 TSL 2 BASIC6.75□□□□□ -1.33
COL1A1P02452 MIR4500HG-201ENST00000436290 1675 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
COL1A1P02452 ARID5B-201ENST00000279873 7891 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
COL1A1P02452 NAT1-208ENST00000520546 1446 ntAPPRIS P1 BASIC6.74□□□□□ -1.33
COL1A1P02452 OR9Q2-202ENST00000641291 3774 ntAPPRIS P1 BASIC6.74□□□□□ -1.33
COL1A1P02452 THEMIS-206ENST00000630369 2786 ntAPPRIS ALT2 TSL 1 (best) BASIC6.74□□□□□ -1.33
COL1A1P02452 EPC2-201ENST00000258484 3649 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
COL1A1P02452 FCHSD2-201ENST00000311172 4340 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
COL1A1P02452 MIR550A3-201ENST00000390735 95 ntBASIC6.74□□□□□ -1.33
COL1A1P02452 CACNB4-203ENST00000397327 2112 ntTSL 5 BASIC6.74□□□□□ -1.33
COL1A1P02452 RPL23AP17-201ENST00000401064 499 ntBASIC6.74□□□□□ -1.33
COL1A1P02452 RN7SL447P-201ENST00000494711 245 ntBASIC6.74□□□□□ -1.33
COL1A1P02452 snoU109.5-201ENST00000516231 132 ntBASIC6.74□□□□□ -1.33
COL1A1P02452 LINC01609-202ENST00000522778 566 ntTSL 2 BASIC6.74□□□□□ -1.33
COL1A1P02452 AC027804.1-201ENST00000534653 529 ntTSL 2 BASIC6.74□□□□□ -1.33
COL1A1P02452 AC092078.1-201ENST00000558370 325 ntTSL 3 BASIC6.74□□□□□ -1.33
COL1A1P02452 AL513327.3-201ENST00000602618 469 ntBASIC6.74□□□□□ -1.33
COL1A1P02452 MYPN-204ENST00000540630 5707 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
COL1A1P02452 ZBTB38-202ENST00000441582 3662 ntAPPRIS P1 TSL 2 BASIC6.74□□□□□ -1.33
COL1A1P02452 SATL1-202ENST00000509231 2224 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
COL1A1P02452 PREPL-216ENST00000541738 6049 ntTSL 2 BASIC6.74□□□□□ -1.33
COL1A1P02452 MDM4-205ENST00000391947 10008 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
COL1A1P02452 TRPC4-202ENST00000355779 2784 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
COL1A1P02452 TRPC4-204ENST00000379673 2760 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
COL1A1P02452 ASCC1-203ENST00000342444 2270 ntTSL 2 BASIC6.74□□□□□ -1.33
COL1A1P02452 LINC00906-206ENST00000589921 3444 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
COL1A1P02452 KIAA0232-202ENST00000425103 7771 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
COL1A1P02452 NELL2-201ENST00000333837 2943 ntTSL 2 BASIC6.74□□□□□ -1.33
COL1A1P02452 TRIM6-205ENST00000445329 2951 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
COL1A1P02452 DROSHA-212ENST00000511367 5305 ntAPPRIS P4 TSL 1 (best) BASIC6.73□□□□□ -1.33
COL1A1P02452 WDCP-201ENST00000295148 3817 ntAPPRIS P3 TSL 2 BASIC6.73□□□□□ -1.33
COL1A1P02452 HNMT-203ENST00000329366 835 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
COL1A1P02452 MTND4LP17-201ENST00000414607 293 ntBASIC6.73□□□□□ -1.33
COL1A1P02452 AC022535.1-201ENST00000420082 691 ntTSL 3 BASIC6.73□□□□□ -1.33
COL1A1P02452 AC007161.1-204ENST00000423039 460 ntBASIC6.73□□□□□ -1.33
COL1A1P02452 LINC01740-201ENST00000423842 332 ntTSL 2 BASIC6.73□□□□□ -1.33
COL1A1P02452 AL021408.1-201ENST00000430428 552 ntTSL 4 BASIC6.73□□□□□ -1.33
COL1A1P02452 VN1R54P-201ENST00000435210 1049 ntBASIC6.73□□□□□ -1.33
COL1A1P02452 RPS17P5-201ENST00000498293 408 ntBASIC6.73□□□□□ -1.33
COL1A1P02452 PGAM1P13-201ENST00000507497 754 ntBASIC6.73□□□□□ -1.33
COL1A1P02452 AC079226.2-201ENST00000509283 518 ntTSL 2 BASIC6.73□□□□□ -1.33
COL1A1P02452 RN7SKP248-201ENST00000516278 305 ntBASIC6.73□□□□□ -1.33
COL1A1P02452 MS4A6A-210ENST00000529054 1160 ntTSL 5 BASIC6.73□□□□□ -1.33
COL1A1P02452 BLZF2P-201ENST00000553776 1130 ntBASIC6.73□□□□□ -1.33
COL1A1P02452 AC087190.2-201ENST00000565648 731 ntTSL 3 BASIC6.73□□□□□ -1.33
COL1A1P02452 AL163952.1-202ENST00000569625 600 ntBASIC6.73□□□□□ -1.33
COL1A1P02452 SETSIP-202ENST00000596516 909 ntAPPRIS P2 BASIC6.73□□□□□ -1.33
COL1A1P02452 AC239809.3-208ENST00000611452 531 ntTSL 5 BASIC6.73□□□□□ -1.33
COL1A1P02452 WBP1LP8-201ENST00000617401 327 ntBASIC6.73□□□□□ -1.33
COL1A1P02452 AC009093.5-201ENST00000620963 359 ntTSL 2 BASIC6.73□□□□□ -1.33
COL1A1P02452 AC073342.3-201ENST00000624211 193 ntBASIC6.73□□□□□ -1.33
COL1A1P02452 LAMTOR5-AS1-233ENST00000625451 470 ntTSL 5 BASIC6.73□□□□□ -1.33
COL1A1P02452 LRRC7-203ENST00000370958 2375 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
COL1A1P02452 CD47-201ENST00000355354 5020 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
COL1A1P02452 LINC01684-203ENST00000453784 2908 ntTSL 2 BASIC6.73□□□□□ -1.33
COL1A1P02452 TMTC2-204ENST00000549919 6211 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
COL1A1P02452 SORBS1-202ENST00000306402 5858 ntAPPRIS ALT2 TSL 1 (best) BASIC6.73□□□□□ -1.33
COL1A1P02452 ACACA-240ENST00000617649 7912 ntTSL 5 BASIC6.73□□□□□ -1.33
COL1A1P02452 PSD3-218ENST00000523619 8145 ntAPPRIS ALT2 TSL 1 (best) BASIC6.73□□□□□ -1.33
COL1A1P02452 AC092828.1-201ENST00000501211 5391 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
COL1A1P02452 SAMD3-204ENST00000439090 2093 ntAPPRIS P1 TSL 2 BASIC6.73□□□□□ -1.33
COL1A1P02452 BRWD1-203ENST00000342449 12929 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
COL1A1P02452 FRMD4B-210ENST00000478263 3761 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
COL1A1P02452 TANK-205ENST00000405852 2155 ntTSL 5 BASIC6.73□□□□□ -1.33
COL1A1P02452 UNC13B-209ENST00000635942 14550 ntAPPRIS ALT2 TSL 5 BASIC6.73□□□□□ -1.33
COL1A1P02452 ZNF253-203ENST00000589717 3519 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
COL1A1P02452 PHC3-203ENST00000467570 2595 ntTSL 2 BASIC6.73□□□□□ -1.33
COL1A1P02452 PTPRD-206ENST00000397617 8248 ntTSL 5 BASIC6.73□□□□□ -1.33
COL1A1P02452 PPIL1-201ENST00000373699 1739 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
COL1A1P02452 DPP8-210ENST00000559233 2953 ntAPPRIS P4 TSL 2 BASIC6.73□□□□□ -1.33
COL1A1P02452 ESRRG-205ENST00000366937 5365 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
COL1A1P02452 GPR65-201ENST00000267549 4522 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
COL1A1P02452 OR2J3-202ENST00000641151 3297 ntAPPRIS P1 BASIC6.73□□□□□ -1.33
COL1A1P02452 PAK3-202ENST00000360648 2241 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
COL1A1P02452 TRAPPC6B-201ENST00000330149 3242 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
COL1A1P02452 PSG11-201ENST00000306322 990 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
COL1A1P02452 VN1R21P-201ENST00000426703 765 ntBASIC6.73□□□□□ -1.33
COL1A1P02452 CRIP1P1-201ENST00000427567 185 ntBASIC6.73□□□□□ -1.33
Retrieved 100 of 98,524 protein–RNA pairs in 108.1 ms