Protein–RNA interactions for Protein: O60232

SSSCA1, Sjoegren syndrome/scleroderma autoantigen 1, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1O60232 LINC00894-203ENST00000432696 298 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
SSSCA1O60232 RPL19P16-201ENST00000433839 588 ntBASIC4.51□□□□□ -1.69
SSSCA1O60232 AL353662.1-201ENST00000439099 327 ntBASIC4.51□□□□□ -1.69
SSSCA1O60232 AL354793.1-201ENST00000446028 713 ntTSL 3 BASIC4.51□□□□□ -1.69
SSSCA1O60232 RN7SL393P-201ENST00000463588 296 ntBASIC4.51□□□□□ -1.69
SSSCA1O60232 CAMTA1-205ENST00000467404 546 ntTSL 3 BASIC4.51□□□□□ -1.69
SSSCA1O60232 AC117386.1-201ENST00000474444 606 ntTSL 4 BASIC4.51□□□□□ -1.69
SSSCA1O60232 MYL12BP2-201ENST00000503948 512 ntBASIC4.51□□□□□ -1.69
SSSCA1O60232 CSNK1A1P3-201ENST00000504105 330 ntBASIC4.51□□□□□ -1.69
SSSCA1O60232 ENPP7P11-201ENST00000505915 627 ntBASIC4.51□□□□□ -1.69
SSSCA1O60232 AC091912.1-201ENST00000511351 248 ntBASIC4.51□□□□□ -1.69
SSSCA1O60232 AC098976.1-201ENST00000513014 541 ntBASIC4.51□□□□□ -1.69
SSSCA1O60232 SPRY4-AS1-205ENST00000514303 152 ntTSL 3 BASIC4.51□□□□□ -1.69
SSSCA1O60232 AC112242.1-201ENST00000515805 406 ntTSL 3 BASIC4.51□□□□□ -1.69
SSSCA1O60232 RNA5SP75-201ENST00000516841 111 ntBASIC4.51□□□□□ -1.69
SSSCA1O60232 AC092709.1-201ENST00000521355 1045 ntBASIC4.51□□□□□ -1.69
SSSCA1O60232 BCAS2P1-201ENST00000528022 632 ntBASIC4.51□□□□□ -1.69
SSSCA1O60232 TRIM51DP-201ENST00000529746 596 ntBASIC4.51□□□□□ -1.69
SSSCA1O60232 CDKN3-206ENST00000541304 1070 ntTSL 2 BASIC4.51□□□□□ -1.69
SSSCA1O60232 AC078922.1-201ENST00000547547 434 ntTSL 3 BASIC4.51□□□□□ -1.69
SSSCA1O60232 AC015660.3-201ENST00000559569 198 ntTSL 3 BASIC4.51□□□□□ -1.69
SSSCA1O60232 AC021483.1-201ENST00000560760 539 ntTSL 3 BASIC4.51□□□□□ -1.69
SSSCA1O60232 AC096996.1-201ENST00000563813 325 ntBASIC4.51□□□□□ -1.69
SSSCA1O60232 AC055855.2-201ENST00000565993 500 ntTSL 2 BASIC4.51□□□□□ -1.69
SSSCA1O60232 PRPF19P1-201ENST00000584766 898 ntBASIC4.51□□□□□ -1.69
SSSCA1O60232 AC011891.2-201ENST00000604949 397 ntBASIC4.51□□□□□ -1.69
SSSCA1O60232 AL589182.1-201ENST00000611785 320 ntTSL 5 BASIC4.51□□□□□ -1.69
SSSCA1O60232 OSTC-205ENST00000613215 876 ntTSL 2 BASIC4.51□□□□□ -1.69
SSSCA1O60232 uc_338.7-201ENST00000621834 124 ntBASIC4.51□□□□□ -1.69
SSSCA1O60232 OR52B4-201ENST00000624801 1124 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
SSSCA1O60232 FAM83B-201ENST00000306858 3167 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
SSSCA1O60232 RUFY2-201ENST00000265865 2033 ntTSL 2 BASIC4.51□□□□□ -1.69
SSSCA1O60232 AC011755.1-201ENST00000623763 2049 ntBASIC4.51□□□□□ -1.69
SSSCA1O60232 AC005261.6-201ENST00000623072 1387 ntBASIC4.51□□□□□ -1.69
SSSCA1O60232 ATRX-202ENST00000395603 10218 ntAPPRIS ALT2 TSL 1 (best) BASIC4.51□□□□□ -1.69
SSSCA1O60232 AC083843.2-201ENST00000568248 6253 ntBASIC4.5□□□□□ -1.69
SSSCA1O60232 AC003973.3-201ENST00000624863 2822 ntBASIC4.5□□□□□ -1.69
SSSCA1O60232 AC139426.3-201ENST00000605648 2059 ntBASIC4.5□□□□□ -1.69
SSSCA1O60232 AC005703.1-201ENST00000431343 1773 ntTSL 2 BASIC4.5□□□□□ -1.69
SSSCA1O60232 CYBRD1-203ENST00000409484 1493 ntTSL 2 BASIC4.5□□□□□ -1.69
SSSCA1O60232 LDAH-211ENST00000541941 3807 ntTSL 2 BASIC4.5□□□□□ -1.69
SSSCA1O60232 POLK-210ENST00000508526 2019 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
SSSCA1O60232 PHLDB2-214ENST00000495180 4159 ntTSL 2 BASIC4.5□□□□□ -1.69
SSSCA1O60232 OR8U1-201ENST00000302270 930 ntAPPRIS P1 BASIC4.5□□□□□ -1.69
SSSCA1O60232 OR1L6-202ENST00000373684 1044 ntBASIC4.5□□□□□ -1.69
SSSCA1O60232 OR5D16-201ENST00000378396 987 ntAPPRIS P1 BASIC4.5□□□□□ -1.69
SSSCA1O60232 RPL21P67-201ENST00000402896 478 ntBASIC4.5□□□□□ -1.69
SSSCA1O60232 AL138828.1-204ENST00000413745 898 ntTSL 5 BASIC4.5□□□□□ -1.69
SSSCA1O60232 RPL7AP51-201ENST00000422016 760 ntBASIC4.5□□□□□ -1.69
SSSCA1O60232 OR5K2-201ENST00000427338 1060 ntAPPRIS P1 BASIC4.5□□□□□ -1.69
SSSCA1O60232 RPL7AP49-201ENST00000429522 581 ntBASIC4.5□□□□□ -1.69
SSSCA1O60232 AC008063.2-201ENST00000432251 619 ntTSL 2 BASIC4.5□□□□□ -1.69
SSSCA1O60232 AL591438.1-201ENST00000433508 581 ntBASIC4.5□□□□□ -1.69
SSSCA1O60232 PSMD8P1-201ENST00000436275 769 ntBASIC4.5□□□□□ -1.69
SSSCA1O60232 RPEP4-201ENST00000437636 602 ntBASIC4.5□□□□□ -1.69
SSSCA1O60232 AL451164.3-201ENST00000441377 447 ntTSL 5 BASIC4.5□□□□□ -1.69
SSSCA1O60232 CYCSP51-201ENST00000443545 318 ntBASIC4.5□□□□□ -1.69
SSSCA1O60232 AL392089.1-202ENST00000444793 449 ntTSL 2 BASIC4.5□□□□□ -1.69
SSSCA1O60232 GAPDHP14-201ENST00000450472 937 ntBASIC4.5□□□□□ -1.69
SSSCA1O60232 NDUFB3-204ENST00000454214 547 ntAPPRIS P1 TSL 2 BASIC4.5□□□□□ -1.69
SSSCA1O60232 AZGP1P2-201ENST00000454506 345 ntBASIC4.5□□□□□ -1.69
SSSCA1O60232 CPHL1P-204ENST00000482639 584 ntTSL 5 BASIC4.5□□□□□ -1.69
SSSCA1O60232 AC021106.1-201ENST00000509020 1058 ntBASIC4.5□□□□□ -1.69
SSSCA1O60232 HMGN1P17-201ENST00000513734 295 ntBASIC4.5□□□□□ -1.69
SSSCA1O60232 HMGN1P9-201ENST00000515212 298 ntBASIC4.5□□□□□ -1.69
SSSCA1O60232 CDC42P3-201ENST00000518493 633 ntBASIC4.5□□□□□ -1.69
SSSCA1O60232 OR52B2-201ENST00000530810 1079 ntAPPRIS P1 BASIC4.5□□□□□ -1.69
SSSCA1O60232 AL121790.1-201ENST00000554829 738 ntTSL 3 BASIC4.5□□□□□ -1.69
SSSCA1O60232 AC074050.3-201ENST00000569175 441 ntTSL 4 BASIC4.5□□□□□ -1.69
SSSCA1O60232 AC090403.1-202ENST00000582108 833 ntTSL 3 BASIC4.5□□□□□ -1.69
SSSCA1O60232 MIR4260-201ENST00000583107 67 ntBASIC4.5□□□□□ -1.69
SSSCA1O60232 LINC01533-204ENST00000590719 435 ntTSL 5 BASIC4.5□□□□□ -1.69
SSSCA1O60232 ZNF682-208ENST00000596019 552 ntTSL 5 BASIC4.5□□□□□ -1.69
SSSCA1O60232 ELSPBP1-205ENST00000597519 557 ntTSL 3 BASIC4.5□□□□□ -1.69
SSSCA1O60232 AC068768.2-201ENST00000602352 343 ntBASIC4.5□□□□□ -1.69
SSSCA1O60232 AL353804.2-201ENST00000603360 347 ntTSL 5 BASIC4.5□□□□□ -1.69
SSSCA1O60232 AC008555.3-201ENST00000603717 442 ntTSL 3 BASIC4.5□□□□□ -1.69
SSSCA1O60232 AL078624.2-201ENST00000605063 554 ntBASIC4.5□□□□□ -1.69
SSSCA1O60232 AL356608.1-201ENST00000610034 820 ntBASIC4.5□□□□□ -1.69
SSSCA1O60232 PCDHB2-203ENST00000624874 565 ntTSL 5 BASIC4.5□□□□□ -1.69
SSSCA1O60232 LINC00506-201ENST00000628435 525 ntTSL 4 BASIC4.5□□□□□ -1.69
SSSCA1O60232 SPTY2D1-AS1-206ENST00000636011 853 ntAPPRIS ALT2 TSL 5 BASIC4.5□□□□□ -1.69
SSSCA1O60232 BBX-204ENST00000406780 3674 ntAPPRIS P3 TSL 5 BASIC4.5□□□□□ -1.69
SSSCA1O60232 AC100757.1-201ENST00000616872 1835 ntBASIC4.5□□□□□ -1.69
SSSCA1O60232 LINC00907-201ENST00000585627 3324 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
SSSCA1O60232 CDC23-202ENST00000394886 3155 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
SSSCA1O60232 ZNF117-201ENST00000282869 9080 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
SSSCA1O60232 LINC01538-201ENST00000588074 2408 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
SSSCA1O60232 AC010099.4-201ENST00000424515 1453 ntTSL 5 BASIC4.49□□□□□ -1.69
SSSCA1O60232 CD80-204ENST00000478182 1491 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
SSSCA1O60232 ZNF790-201ENST00000356725 3037 ntAPPRIS P1 TSL 2 BASIC4.49□□□□□ -1.69
SSSCA1O60232 NAT1-210ENST00000545197 1827 ntTSL 5 BASIC4.49□□□□□ -1.69
SSSCA1O60232 OFD1P8Y-201ENST00000449148 1433 ntBASIC4.49□□□□□ -1.69
SSSCA1O60232 AL022322.2-201ENST00000624072 20397 ntBASIC4.49□□□□□ -1.69
SSSCA1O60232 CFH-206ENST00000630130 1658 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
SSSCA1O60232 GPATCH2L-214ENST00000621494 12396 ntAPPRIS P1 TSL 2 BASIC4.49□□□□□ -1.69
SSSCA1O60232 CLEC4A-203ENST00000352620 615 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
SSSCA1O60232 TRGV3-201ENST00000390346 537 ntAPPRIS P1 BASIC4.49□□□□□ -1.69
SSSCA1O60232 NPM1P38-201ENST00000403835 865 ntBASIC4.49□□□□□ -1.69
SSSCA1O60232 AL445224.1-201ENST00000420595 737 ntTSL 5 BASIC4.49□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 101.3 ms