Protein–RNA interactions for Protein: O43541

SMAD6, Mothers against decapentaplegic homolog 6, humanhuman

Known RBP Predictions only

Length 496 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6O43541 PEX5L-AS1-201ENST00000466064 827 ntTSL 2 BASIC5.96□□□□□ -1.46
SMAD6O43541 SLC25A51P1-201ENST00000468432 871 ntBASIC5.96□□□□□ -1.46
SMAD6O43541 SUCLG2-AS1-203ENST00000496640 862 ntTSL 5 BASIC5.96□□□□□ -1.46
SMAD6O43541 LNCPRESS2-201ENST00000502518 616 ntTSL 5 BASIC5.96□□□□□ -1.46
SMAD6O43541 SCGB3A2-202ENST00000504320 440 ntTSL 3 BASIC5.96□□□□□ -1.46
SMAD6O43541 AC105420.1-201ENST00000504389 582 ntBASIC5.96□□□□□ -1.46
SMAD6O43541 ERVH-1-201ENST00000507666 639 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
SMAD6O43541 RN7SKP67-201ENST00000515905 235 ntBASIC5.96□□□□□ -1.46
SMAD6O43541 MIR2117-201ENST00000516780 80 ntBASIC5.96□□□□□ -1.46
SMAD6O43541 IGKV3D-34-201ENST00000522638 302 ntBASIC5.96□□□□□ -1.46
SMAD6O43541 OR52E8-201ENST00000537935 1061 ntAPPRIS P1 BASIC5.96□□□□□ -1.46
SMAD6O43541 RNASE9-205ENST00000553706 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC5.96□□□□□ -1.46
SMAD6O43541 EIF1AXP2-201ENST00000555940 413 ntBASIC5.96□□□□□ -1.46
SMAD6O43541 AC135626.1-201ENST00000556983 435 ntBASIC5.96□□□□□ -1.46
SMAD6O43541 AC078909.1-201ENST00000559509 464 ntTSL 2 BASIC5.96□□□□□ -1.46
SMAD6O43541 AC027808.1-201ENST00000560873 683 ntTSL 3 BASIC5.96□□□□□ -1.46
SMAD6O43541 AC136944.1-201ENST00000567464 560 ntTSL 5 BASIC5.96□□□□□ -1.46
SMAD6O43541 AP003117.1-201ENST00000602771 554 ntBASIC5.96□□□□□ -1.46
SMAD6O43541 BX322635.1-201ENST00000605804 496 ntBASIC5.96□□□□□ -1.46
SMAD6O43541 AC004908.3-201ENST00000610248 625 ntBASIC5.96□□□□□ -1.46
SMAD6O43541 AP005212.4-201ENST00000614206 710 ntBASIC5.96□□□□□ -1.46
SMAD6O43541 AL139099.4-201ENST00000614802 114 ntBASIC5.96□□□□□ -1.46
SMAD6O43541 AC021422.1-201ENST00000621212 473 ntBASIC5.96□□□□□ -1.46
SMAD6O43541 LINC00506-201ENST00000628435 525 ntTSL 4 BASIC5.96□□□□□ -1.46
SMAD6O43541 AC103703.1-201ENST00000634783 663 ntBASIC5.96□□□□□ -1.46
SMAD6O43541 SMAP1-206ENST00000619054 3150 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
SMAD6O43541 AC087667.1-201ENST00000500180 1422 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
SMAD6O43541 AC106872.5-201ENST00000508856 1416 ntBASIC5.96□□□□□ -1.46
SMAD6O43541 AC130304.1-201ENST00000622942 2385 ntBASIC5.96□□□□□ -1.46
SMAD6O43541 DCX-207ENST00000635795 9163 ntAPPRIS P4 TSL 1 (best) BASIC5.96□□□□□ -1.46
SMAD6O43541 EDA2R-204ENST00000451436 3464 ntAPPRIS P3 TSL 5 BASIC5.96□□□□□ -1.46
SMAD6O43541 MSANTD2-204ENST00000526629 3086 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
SMAD6O43541 DAZ2-204ENST00000382431 3637 ntAPPRIS ALT2 TSL 1 (best) BASIC5.96□□□□□ -1.46
SMAD6O43541 AC124017.1-201ENST00000508112 1594 ntTSL 5 BASIC5.96□□□□□ -1.46
SMAD6O43541 AC022164.1-201ENST00000568767 2673 ntBASIC5.96□□□□□ -1.46
SMAD6O43541 FBXO3-213ENST00000534136 3217 ntTSL 5 BASIC5.96□□□□□ -1.46
SMAD6O43541 CYBB-201ENST00000378588 4324 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
SMAD6O43541 MUC4-215ENST00000475231 16273 ntAPPRIS ALT2 TSL 5 BASIC5.96□□□□□ -1.46
SMAD6O43541 CDC42BPA-201ENST00000334218 10134 ntTSL 5 BASIC5.96□□□□□ -1.46
SMAD6O43541 SBNO1-201ENST00000267176 11121 ntAPPRIS P3 TSL 5 BASIC5.96□□□□□ -1.46
SMAD6O43541 ROR1-AS1-202ENST00000424995 2189 ntTSL 2 BASIC5.96□□□□□ -1.46
SMAD6O43541 AC010099.4-201ENST00000424515 1453 ntTSL 5 BASIC5.96□□□□□ -1.46
SMAD6O43541 SELENOI-205ENST00000613142 8126 ntAPPRIS ALT1 TSL 5 BASIC5.96□□□□□ -1.46
SMAD6O43541 BEND2-201ENST00000380030 1938 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
SMAD6O43541 AC005480.1-202ENST00000555916 3548 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
SMAD6O43541 TMEM200A-202ENST00000392429 5017 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
SMAD6O43541 NLRP11-201ENST00000589093 3417 ntAPPRIS P2 TSL 1 (best) BASIC5.95□□□□□ -1.46
SMAD6O43541 INSL4-201ENST00000239316 1952 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
SMAD6O43541 GPAM-202ENST00000369425 5664 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
SMAD6O43541 SSX5-202ENST00000347757 1261 ntAPPRIS ALT2 TSL 5 BASIC5.95□□□□□ -1.46
SMAD6O43541 RN7SKP78-201ENST00000364711 318 ntBASIC5.95□□□□□ -1.46
SMAD6O43541 RN7SKP269-201ENST00000365545 319 ntBASIC5.95□□□□□ -1.46
SMAD6O43541 PAGE2-202ENST00000374968 551 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
SMAD6O43541 SSX5-203ENST00000376923 1208 ntAPPRIS ALT2 TSL 5 BASIC5.95□□□□□ -1.46
SMAD6O43541 EEF1B2P8-201ENST00000414101 671 ntBASIC5.95□□□□□ -1.46
SMAD6O43541 CDY17P-201ENST00000414121 1282 ntBASIC5.95□□□□□ -1.46
SMAD6O43541 AC007389.1-203ENST00000414811 556 ntTSL 4 BASIC5.95□□□□□ -1.46
SMAD6O43541 AL356806.1-201ENST00000422524 916 ntBASIC5.95□□□□□ -1.46
SMAD6O43541 NAP1L4P2-201ENST00000425958 899 ntBASIC5.95□□□□□ -1.46
SMAD6O43541 ANKRD10-IT1-201ENST00000426991 800 ntTSL 2 BASIC5.95□□□□□ -1.46
SMAD6O43541 AC023141.8-201ENST00000442554 208 ntBASIC5.95□□□□□ -1.46
SMAD6O43541 AC087501.1-201ENST00000445617 715 ntTSL 5 BASIC5.95□□□□□ -1.46
SMAD6O43541 RPL31P15-201ENST00000449770 338 ntBASIC5.95□□□□□ -1.46
SMAD6O43541 HRAT17-202ENST00000451962 687 ntTSL 5 BASIC5.95□□□□□ -1.46
SMAD6O43541 AL445665.1-202ENST00000452436 324 ntBASIC5.95□□□□□ -1.46
SMAD6O43541 OR7L1P-201ENST00000456181 380 ntBASIC5.95□□□□□ -1.46
SMAD6O43541 AL355032.1-201ENST00000472981 438 ntBASIC5.95□□□□□ -1.46
SMAD6O43541 CFHR2-203ENST00000476712 1020 ntAPPRIS ALT2 TSL 3 BASIC5.95□□□□□ -1.46
SMAD6O43541 GAPDHP71-201ENST00000511530 1003 ntBASIC5.95□□□□□ -1.46
SMAD6O43541 MTATP6P1-201ENST00000514057 681 ntBASIC5.95□□□□□ -1.46
SMAD6O43541 RNU6-415P-201ENST00000516252 97 ntBASIC5.95□□□□□ -1.46
SMAD6O43541 AC026688.1-201ENST00000520639 1168 ntBASIC5.95□□□□□ -1.46
SMAD6O43541 C8orf22-204ENST00000522267 739 ntAPPRIS ALT1 TSL 2 BASIC5.95□□□□□ -1.46
SMAD6O43541 AC008680.1-201ENST00000523398 283 ntTSL 3 BASIC5.95□□□□□ -1.46
SMAD6O43541 AC015689.2-201ENST00000528172 1738 ntBASIC5.95□□□□□ -1.46
SMAD6O43541 HMGN2P36-201ENST00000529541 409 ntBASIC5.95□□□□□ -1.46
SMAD6O43541 OR4A42P-201ENST00000531397 938 ntBASIC5.95□□□□□ -1.46
SMAD6O43541 ANP32E-205ENST00000533654 908 ntTSL 2 BASIC5.95□□□□□ -1.46
SMAD6O43541 AP003037.1-201ENST00000537594 267 ntTSL 5 BASIC5.95□□□□□ -1.46
SMAD6O43541 PINLYP-205ENST00000569031 557 ntTSL 2 BASIC5.95□□□□□ -1.46
SMAD6O43541 AC134669.2-201ENST00000578584 1008 ntAPPRIS P1 TSL 2 BASIC5.95□□□□□ -1.46
SMAD6O43541 ANKRD20A5P-203ENST00000580200 566 ntTSL 5 BASIC5.95□□□□□ -1.46
SMAD6O43541 AC021517.1-203ENST00000590257 421 ntTSL 3 BASIC5.95□□□□□ -1.46
SMAD6O43541 UBE2E3-208ENST00000602632 446 ntTSL 2 BASIC5.95□□□□□ -1.46
SMAD6O43541 AP005131.7-201ENST00000610087 611 ntBASIC5.95□□□□□ -1.46
SMAD6O43541 AC239809.3-208ENST00000611452 531 ntTSL 5 BASIC5.95□□□□□ -1.46
SMAD6O43541 AL138960.1-201ENST00000613838 513 ntBASIC5.95□□□□□ -1.46
SMAD6O43541 FP236241.1-206ENST00000625005 987 ntTSL 5 BASIC5.95□□□□□ -1.46
SMAD6O43541 AC106858.1-201ENST00000637497 429 ntBASIC5.95□□□□□ -1.46
SMAD6O43541 ATM-229ENST00000639953 587 ntTSL 5 BASIC5.95□□□□□ -1.46
SMAD6O43541 NRDC-213ENST00000539524 3417 ntAPPRIS ALT2 TSL 1 (best) BASIC5.95□□□□□ -1.46
SMAD6O43541 TEAD1-203ENST00000526600 8477 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
SMAD6O43541 HSPA13-201ENST00000285667 3986 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
SMAD6O43541 AIMP1-202ENST00000394701 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC5.95□□□□□ -1.46
SMAD6O43541 AP001284.1-201ENST00000528393 2118 ntBASIC5.95□□□□□ -1.46
SMAD6O43541 AC009404.1-201ENST00000420330 3090 ntTSL 3 BASIC5.95□□□□□ -1.46
SMAD6O43541 DDX18P6-201ENST00000450119 1997 ntBASIC5.95□□□□□ -1.46
SMAD6O43541 C2orf66-201ENST00000342506 1669 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
SMAD6O43541 ZNF480-205ENST00000595962 4738 ntAPPRIS P3 TSL 1 (best) BASIC5.94□□□□□ -1.46
SMAD6O43541 ATP6V1A-201ENST00000273398 4591 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 107.2 ms