Protein–RNA interactions for Protein: O43353

RIPK2, Receptor-interacting serine/threonine-protein kinase 2, humanhuman

Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK2O43353 AC011891.2-201ENST00000604949 397 ntBASIC5.79□□□□□ -1.48
RIPK2O43353 AL589182.1-201ENST00000611785 320 ntTSL 5 BASIC5.79□□□□□ -1.48
RIPK2O43353 AC243654.3-201ENST00000617427 735 ntTSL 5 BASIC5.79□□□□□ -1.48
RIPK2O43353 LINC02033-201ENST00000623207 971 ntTSL 2 BASIC5.79□□□□□ -1.48
RIPK2O43353 AC026523.2-201ENST00000625039 7739 ntBASIC5.79□□□□□ -1.48
RIPK2O43353 ZNF790-201ENST00000356725 3037 ntAPPRIS P1 TSL 2 BASIC5.79□□□□□ -1.48
RIPK2O43353 AC079097.1-201ENST00000512187 1399 ntBASIC5.79□□□□□ -1.48
RIPK2O43353 PSG10P-201ENST00000501199 1500 ntBASIC5.79□□□□□ -1.48
RIPK2O43353 SLC26A5-208ENST00000393730 2498 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
RIPK2O43353 N4BP2L2-IT2-201ENST00000629393 4890 ntBASIC5.78□□□□□ -1.48
RIPK2O43353 ERP27-201ENST00000266397 2096 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
RIPK2O43353 ERBIN-208ENST00000506030 4386 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
RIPK2O43353 PTK2-213ENST00000519465 3279 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
RIPK2O43353 MYBPC1-216ENST00000550270 3426 ntAPPRIS ALT2 TSL 5 BASIC5.78□□□□□ -1.48
RIPK2O43353 NRXN1-242ENST00000635519 3553 ntTSL 5 BASIC5.78□□□□□ -1.48
RIPK2O43353 SSX3-201ENST00000298396 1232 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
RIPK2O43353 PSG1-202ENST00000312439 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC5.78□□□□□ -1.48
RIPK2O43353 RBMS3-202ENST00000383766 2757 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
RIPK2O43353 MIR188-201ENST00000385034 86 ntBASIC5.78□□□□□ -1.48
RIPK2O43353 TRAV8-7-201ENST00000390456 341 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
RIPK2O43353 SPAM1-203ENST00000402183 1860 ntAPPRIS P4 TSL 5 BASIC5.78□□□□□ -1.48
RIPK2O43353 CEACAM1-208ENST00000403461 1263 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
RIPK2O43353 AL096711.1-201ENST00000404780 554 ntBASIC5.78□□□□□ -1.48
RIPK2O43353 RNU2-18P-201ENST00000411224 162 ntBASIC5.78□□□□□ -1.48
RIPK2O43353 AL583839.2-201ENST00000443716 641 ntTSL 3 BASIC5.78□□□□□ -1.48
RIPK2O43353 AP000470.1-201ENST00000448063 693 ntTSL 5 BASIC5.78□□□□□ -1.48
RIPK2O43353 LINC01364-201ENST00000452509 889 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
RIPK2O43353 TAAR4P-201ENST00000454843 1039 ntBASIC5.78□□□□□ -1.48
RIPK2O43353 RPS23P2-201ENST00000463671 415 ntBASIC5.78□□□□□ -1.48
RIPK2O43353 LINC02006-201ENST00000488210 524 ntTSL 4 BASIC5.78□□□□□ -1.48
RIPK2O43353 AC122714.1-201ENST00000502510 459 ntBASIC5.78□□□□□ -1.48
RIPK2O43353 HMGN1P17-201ENST00000513734 295 ntBASIC5.78□□□□□ -1.48
RIPK2O43353 RN7SKP253-201ENST00000516424 309 ntBASIC5.78□□□□□ -1.48
RIPK2O43353 NSMCE2-202ENST00000517315 996 ntTSL 3 BASIC5.78□□□□□ -1.48
RIPK2O43353 MIR7853-201ENST00000584820 132 ntBASIC5.78□□□□□ -1.48
RIPK2O43353 AC005180.2-201ENST00000585620 562 ntTSL 3 BASIC5.78□□□□□ -1.48
RIPK2O43353 AC010503.3-201ENST00000594355 540 ntBASIC5.78□□□□□ -1.48
RIPK2O43353 ZNF682-208ENST00000596019 552 ntTSL 5 BASIC5.78□□□□□ -1.48
RIPK2O43353 COX6CP7-201ENST00000597056 208 ntBASIC5.78□□□□□ -1.48
RIPK2O43353 AC068768.2-201ENST00000602352 343 ntBASIC5.78□□□□□ -1.48
RIPK2O43353 U91328.4-201ENST00000608919 517 ntBASIC5.78□□□□□ -1.48
RIPK2O43353 MALAT1-214ENST00000618925 424 ntTSL 5 BASIC5.78□□□□□ -1.48
RIPK2O43353 LINC02536-201ENST00000625799 625 ntTSL 3 BASIC5.78□□□□□ -1.48
RIPK2O43353 AL592430.2-201ENST00000633779 486 ntTSL 5 BASIC5.78□□□□□ -1.48
RIPK2O43353 ATF2-202ENST00000345739 4079 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
RIPK2O43353 LINC00309-201ENST00000431020 3307 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
RIPK2O43353 TCF7L2-219ENST00000542695 4136 ntTSL 5 BASIC5.78□□□□□ -1.48
RIPK2O43353 RYR3-209ENST00000634418 15078 ntAPPRIS ALT2 TSL 5 BASIC5.78□□□□□ -1.48
RIPK2O43353 MIPOL1-204ENST00000539062 2389 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
RIPK2O43353 ZNF418-205ENST00000595830 3543 ntAPPRIS P3 TSL 1 (best) BASIC5.78□□□□□ -1.48
RIPK2O43353 LMO3-209ENST00000447609 3365 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
RIPK2O43353 GHR-207ENST00000537449 4419 ntAPPRIS P1 TSL 5 BASIC5.77□□□□□ -1.49
RIPK2O43353 ATP5A1P1-201ENST00000454088 1321 ntBASIC5.77□□□□□ -1.49
RIPK2O43353 PCGF5-201ENST00000336126 7018 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
RIPK2O43353 OR8J3-204ENST00000642058 3806 ntAPPRIS P1 BASIC5.77□□□□□ -1.49
RIPK2O43353 CCDC26-201ENST00000446592 1721 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
RIPK2O43353 AC008627.1-201ENST00000517511 1704 ntBASIC5.77□□□□□ -1.49
RIPK2O43353 ADAM29-203ENST00000445694 3244 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
RIPK2O43353 MYO5A-201ENST00000356338 11971 ntAPPRIS ALT1 TSL 1 (best) BASIC5.77□□□□□ -1.49
RIPK2O43353 ADH4-207ENST00000505590 1400 ntTSL 5 BASIC5.77□□□□□ -1.49
RIPK2O43353 PI15-202ENST00000523773 1413 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
RIPK2O43353 REP15-201ENST00000310791 1078 ntAPPRIS P1 BASIC5.77□□□□□ -1.49
RIPK2O43353 ZNF66-202ENST00000360204 1120 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
RIPK2O43353 PLIN2-203ENST00000380465 631 ntTSL 2 BASIC5.77□□□□□ -1.49
RIPK2O43353 RNU6-729P-201ENST00000384399 107 ntBASIC5.77□□□□□ -1.49
RIPK2O43353 MIR431-201ENST00000385266 114 ntBASIC5.77□□□□□ -1.49
RIPK2O43353 TRAV1-2-201ENST00000390423 402 ntAPPRIS P1 BASIC5.77□□□□□ -1.49
RIPK2O43353 SAMD13-206ENST00000394834 785 ntAPPRIS P1 TSL 2 BASIC5.77□□□□□ -1.49
RIPK2O43353 GAPDHP15-201ENST00000398586 975 ntBASIC5.77□□□□□ -1.49
RIPK2O43353 AC016739.1-201ENST00000405359 345 ntBASIC5.77□□□□□ -1.49
RIPK2O43353 AL445224.1-201ENST00000420595 737 ntTSL 5 BASIC5.77□□□□□ -1.49
RIPK2O43353 PSMD8P1-201ENST00000436275 769 ntBASIC5.77□□□□□ -1.49
RIPK2O43353 MEOX2-AS1-201ENST00000442176 697 ntTSL 3 BASIC5.77□□□□□ -1.49
RIPK2O43353 AC245291.3-201ENST00000443400 292 ntBASIC5.77□□□□□ -1.49
RIPK2O43353 AC092865.4-201ENST00000477936 615 ntBASIC5.77□□□□□ -1.49
RIPK2O43353 ATP5LP5-201ENST00000483050 299 ntBASIC5.77□□□□□ -1.49
RIPK2O43353 LINC01332-201ENST00000506612 502 ntTSL 4 BASIC5.77□□□□□ -1.49
RIPK2O43353 AL035458.2-201ENST00000512005 478 ntTSL 3 BASIC5.77□□□□□ -1.49
RIPK2O43353 AC104248.1-201ENST00000522244 481 ntTSL 3 BASIC5.77□□□□□ -1.49
RIPK2O43353 AC078820.1-201ENST00000548702 742 ntTSL 3 BASIC5.77□□□□□ -1.49
RIPK2O43353 DUX4L52-201ENST00000549363 777 ntBASIC5.77□□□□□ -1.49
RIPK2O43353 AC008149.1-201ENST00000551844 525 ntTSL 4 BASIC5.77□□□□□ -1.49
RIPK2O43353 AL359219.2-201ENST00000555184 348 ntBASIC5.77□□□□□ -1.49
RIPK2O43353 AL359232.1-202ENST00000556874 1206 ntTSL 2 BASIC5.77□□□□□ -1.49
RIPK2O43353 AGGF1P7-201ENST00000562369 913 ntBASIC5.77□□□□□ -1.49
RIPK2O43353 AP005119.1-201ENST00000580956 292 ntBASIC5.77□□□□□ -1.49
RIPK2O43353 AC243967.1-201ENST00000598976 578 ntAPPRIS P1 TSL 5 BASIC5.77□□□□□ -1.49
RIPK2O43353 AC092944.2-201ENST00000605443 889 ntBASIC5.77□□□□□ -1.49
RIPK2O43353 PACRG-210ENST00000611387 279 ntTSL 5 BASIC5.77□□□□□ -1.49
RIPK2O43353 MIR6885-201ENST00000612241 66 ntBASIC5.77□□□□□ -1.49
RIPK2O43353 AC015574.1-202ENST00000616588 456 ntTSL 5 BASIC5.77□□□□□ -1.49
RIPK2O43353 AP003400.2-201ENST00000624036 666 ntBASIC5.77□□□□□ -1.49
RIPK2O43353 HIF1AN-201ENST00000299163 13011 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
RIPK2O43353 SLCO1C1-209ENST00000545604 2557 ntTSL 2 BASIC5.77□□□□□ -1.49
RIPK2O43353 GBA3-205ENST00000511446 2018 ntTSL 2 BASIC5.77□□□□□ -1.49
RIPK2O43353 AP002518.1-201ENST00000534904 3837 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
RIPK2O43353 FSHB-202ENST00000417547 1890 ntAPPRIS P1 TSL 5 BASIC5.77□□□□□ -1.49
RIPK2O43353 AL359715.3-201ENST00000569267 2123 ntBASIC5.77□□□□□ -1.49
RIPK2O43353 MAP2-205ENST00000392194 5303 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
RIPK2O43353 VSNL1-203ENST00000406397 2725 ntAPPRIS P1 TSL 5 BASIC5.76□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 205.3 ms