Protein–RNA interactions for Protein: O00635

TRIM38, E3 ubiquitin-protein ligase TRIM38, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM38O00635 FANCD2-203ENST00000419585 5185 ntAPPRIS ALT2 TSL 1 (best) BASIC6.23□□□□□ -1.41
TRIM38O00635 CC2D2B-202ENST00000410012 1792 ntAPPRIS ALT2 TSL 2 BASIC6.23□□□□□ -1.41
TRIM38O00635 TBC1D23-202ENST00000394144 3677 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
TRIM38O00635 FAM216B-202ENST00000537894 3300 ntAPPRIS P1 TSL 4 BASIC6.23□□□□□ -1.41
TRIM38O00635 SPAM1-201ENST00000223028 2007 ntAPPRIS ALT2 TSL 5 BASIC6.23□□□□□ -1.41
TRIM38O00635 AL050403.1-201ENST00000448859 2006 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
TRIM38O00635 CAPRIN2-202ENST00000395805 4156 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
TRIM38O00635 WDCP-201ENST00000295148 3817 ntAPPRIS P3 TSL 2 BASIC6.23□□□□□ -1.41
TRIM38O00635 ZNF737-201ENST00000427401 2867 ntAPPRIS P1 TSL 2 BASIC6.23□□□□□ -1.41
TRIM38O00635 ANK2-226ENST00000612754 6134 ntTSL 5 BASIC6.23□□□□□ -1.41
TRIM38O00635 PCYT1A-204ENST00000419333 1325 ntTSL 5 BASIC6.23□□□□□ -1.41
TRIM38O00635 RASSF8-216ENST00000615708 1328 ntTSL 5 BASIC6.23□□□□□ -1.41
TRIM38O00635 AC044839.1-206ENST00000635559 1324 ntTSL 5 BASIC6.23□□□□□ -1.41
TRIM38O00635 FAM205A-201ENST00000378788 4225 ntAPPRIS P1 TSL 2 BASIC6.23□□□□□ -1.41
TRIM38O00635 BICD1-204ENST00000548411 8811 ntAPPRIS ALT1 TSL 1 (best) BASIC6.23□□□□□ -1.41
TRIM38O00635 SCN1A-203ENST00000409050 5946 ntTSL 5 BASIC6.23□□□□□ -1.41
TRIM38O00635 AC130360.2-201ENST00000533477 1556 ntBASIC6.23□□□□□ -1.41
TRIM38O00635 VPS13B-203ENST00000358544 14094 ntAPPRIS P4 TSL 1 (best) BASIC6.22□□□□□ -1.41
TRIM38O00635 TEX9-203ENST00000558083 4440 ntTSL 2 BASIC6.22□□□□□ -1.41
TRIM38O00635 CD84-208ENST00000534968 7885 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
TRIM38O00635 TYW3-203ENST00000457880 3335 ntTSL 2 BASIC6.22□□□□□ -1.41
TRIM38O00635 CCDC150-202ENST00000409270 2243 ntAPPRIS ALT2 TSL 5 BASIC6.22□□□□□ -1.41
TRIM38O00635 SLC16A4-201ENST00000369779 2632 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
TRIM38O00635 TRMT13-202ENST00000370141 3129 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
TRIM38O00635 MYBL1-206ENST00000524176 2148 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
TRIM38O00635 VEPH1-202ENST00000392832 3044 ntAPPRIS P1 TSL 2 BASIC6.22□□□□□ -1.41
TRIM38O00635 DNHD1-201ENST00000254579 14862 ntAPPRIS P1 TSL 5 BASIC6.22□□□□□ -1.41
TRIM38O00635 ANO4-202ENST00000392979 3909 ntAPPRIS P3 TSL 2 BASIC6.22□□□□□ -1.41
TRIM38O00635 CLEC4A-203ENST00000352620 615 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
TRIM38O00635 CLEC4A-204ENST00000360500 597 ntTSL 5 BASIC6.22□□□□□ -1.41
TRIM38O00635 RNA5SP514-201ENST00000363717 111 ntBASIC6.22□□□□□ -1.41
TRIM38O00635 TRAV8-4-201ENST00000390438 469 ntAPPRIS P1 BASIC6.22□□□□□ -1.41
TRIM38O00635 GSTA12P-201ENST00000402398 508 ntBASIC6.22□□□□□ -1.41
TRIM38O00635 Z86062.1-201ENST00000406773 777 ntBASIC6.22□□□□□ -1.41
TRIM38O00635 CCL20-202ENST00000409189 839 ntAPPRIS ALT1 TSL 1 (best) BASIC6.22□□□□□ -1.41
TRIM38O00635 C9orf147-201ENST00000412934 584 ntTSL 3 BASIC6.22□□□□□ -1.41
TRIM38O00635 BTF3P9-201ENST00000418784 283 ntBASIC6.22□□□□□ -1.41
TRIM38O00635 NME1P1-201ENST00000420914 382 ntBASIC6.22□□□□□ -1.41
TRIM38O00635 AC003989.1-201ENST00000434569 565 ntBASIC6.22□□□□□ -1.41
TRIM38O00635 AC072062.1-204ENST00000437897 1132 ntTSL 5 BASIC6.22□□□□□ -1.41
TRIM38O00635 SOCS5P1-201ENST00000440415 949 ntBASIC6.22□□□□□ -1.41
TRIM38O00635 AL137186.1-201ENST00000440436 480 ntTSL 3 BASIC6.22□□□□□ -1.41
TRIM38O00635 AL139120.1-201ENST00000443652 358 ntTSL 3 BASIC6.22□□□□□ -1.41
TRIM38O00635 AF130359.1-201ENST00000444868 438 ntTSL 3 BASIC6.22□□□□□ -1.41
TRIM38O00635 AL022237.1-201ENST00000446663 358 ntBASIC6.22□□□□□ -1.41
TRIM38O00635 MAGI2-AS3-210ENST00000448636 798 ntTSL 5 BASIC6.22□□□□□ -1.41
TRIM38O00635 PPIAP27-201ENST00000453800 265 ntBASIC6.22□□□□□ -1.41
TRIM38O00635 AC103563.5-201ENST00000455643 364 ntBASIC6.22□□□□□ -1.41
TRIM38O00635 RN7SL369P-201ENST00000477138 299 ntBASIC6.22□□□□□ -1.41
TRIM38O00635 RPL7P51-201ENST00000490532 749 ntBASIC6.22□□□□□ -1.41
TRIM38O00635 RPL23AP73-201ENST00000492507 471 ntBASIC6.22□□□□□ -1.41
TRIM38O00635 AC093534.1-201ENST00000504977 132 ntBASIC6.22□□□□□ -1.41
TRIM38O00635 KHDC1P1-201ENST00000511053 508 ntBASIC6.22□□□□□ -1.41
TRIM38O00635 SNORA76.2-201ENST00000517095 137 ntBASIC6.22□□□□□ -1.41
TRIM38O00635 AC110011.1-201ENST00000518260 582 ntTSL 3 BASIC6.22□□□□□ -1.41
TRIM38O00635 AC022973.3-201ENST00000521014 467 ntTSL 5 BASIC6.22□□□□□ -1.41
TRIM38O00635 IGLVIV-66-1-201ENST00000521832 460 ntBASIC6.22□□□□□ -1.41
TRIM38O00635 LINC00534-203ENST00000523406 812 ntTSL 3 BASIC6.22□□□□□ -1.41
TRIM38O00635 OR4A40P-201ENST00000533878 948 ntBASIC6.22□□□□□ -1.41
TRIM38O00635 CTNNA3-205ENST00000545309 555 ntTSL 5 BASIC6.22□□□□□ -1.41
TRIM38O00635 AL161804.1-201ENST00000555600 708 ntTSL 3 BASIC6.22□□□□□ -1.41
TRIM38O00635 AC009087.1-201ENST00000561827 369 ntTSL 3 BASIC6.22□□□□□ -1.41
TRIM38O00635 AC093525.4-201ENST00000562232 459 ntTSL 5 BASIC6.22□□□□□ -1.41
TRIM38O00635 OR4H6P-201ENST00000563771 921 ntBASIC6.22□□□□□ -1.41
TRIM38O00635 AC005774.1-201ENST00000565247 567 ntTSL 4 BASIC6.22□□□□□ -1.41
TRIM38O00635 AC007610.2-201ENST00000566770 666 ntTSL 3 BASIC6.22□□□□□ -1.41
TRIM38O00635 AC007346.1-201ENST00000569208 867 ntBASIC6.22□□□□□ -1.41
TRIM38O00635 LINC00556-201ENST00000569603 412 ntBASIC6.22□□□□□ -1.41
TRIM38O00635 AC012146.2-201ENST00000576545 416 ntBASIC6.22□□□□□ -1.41
TRIM38O00635 AL157938.2-202ENST00000588378 875 ntTSL 5 BASIC6.22□□□□□ -1.41
TRIM38O00635 AC135178.6-201ENST00000605314 398 ntBASIC6.22□□□□□ -1.41
TRIM38O00635 MRPL57P1-201ENST00000621486 265 ntBASIC6.22□□□□□ -1.41
TRIM38O00635 RBMS3-AS2-206ENST00000629296 438 ntTSL 5 BASIC6.22□□□□□ -1.41
TRIM38O00635 LINC02341-202ENST00000637462 1295 ntTSL 5 BASIC6.22□□□□□ -1.41
TRIM38O00635 LINC02397-201ENST00000504409 10626 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
TRIM38O00635 PBRM1-207ENST00000409767 4849 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
TRIM38O00635 ZNF735-201ENST00000429565 1570 ntAPPRIS P1 TSL 5 BASIC6.22□□□□□ -1.41
TRIM38O00635 ZNF208-201ENST00000397126 3992 ntAPPRIS P1 TSL 3 BASIC6.22□□□□□ -1.41
TRIM38O00635 NBPF9-203ENST00000610300 2930 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
TRIM38O00635 SETDB2-205ENST00000611815 5313 ntAPPRIS ALT2 TSL 5 BASIC6.22□□□□□ -1.41
TRIM38O00635 ANKRD12-203ENST00000400020 9115 ntAPPRIS ALT2 TSL 1 (best) BASIC6.22□□□□□ -1.41
TRIM38O00635 AC109811.1-201ENST00000512833 2807 ntTSL 1 (best) BASIC6.21□□□□□ -1.41
TRIM38O00635 LINC02060-201ENST00000506041 1626 ntTSL 1 (best) BASIC6.21□□□□□ -1.41
TRIM38O00635 CEP44-206ENST00000503780 4534 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.41
TRIM38O00635 AGBL1-201ENST00000441037 3551 ntAPPRIS ALT2 TSL 5 BASIC6.21□□□□□ -1.41
TRIM38O00635 AC084816.1-210ENST00000540895 1920 ntTSL 2 BASIC6.21□□□□□ -1.41
TRIM38O00635 AC079753.1-201ENST00000623243 3868 ntBASIC6.21□□□□□ -1.41
TRIM38O00635 FCHSD2-208ENST00000458644 2215 ntTSL 2 BASIC6.21□□□□□ -1.42
TRIM38O00635 OR7D2-202ENST00000641288 3248 ntAPPRIS P1 BASIC6.21□□□□□ -1.42
TRIM38O00635 OR5AS1-202ENST00000641320 7860 ntAPPRIS P1 BASIC6.21□□□□□ -1.42
TRIM38O00635 SGO2-201ENST00000357799 4214 ntAPPRIS P2 TSL 1 (best) BASIC6.21□□□□□ -1.42
TRIM38O00635 AF127577.4-201ENST00000432230 5929 ntTSL 5 BASIC6.21□□□□□ -1.42
TRIM38O00635 ZNF836-201ENST00000322146 2811 ntAPPRIS ALT2 TSL 5 BASIC6.21□□□□□ -1.42
TRIM38O00635 OSBPL9-206ENST00000453295 2842 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
TRIM38O00635 SETDB2-201ENST00000258672 2138 ntTSL 5 BASIC6.21□□□□□ -1.42
TRIM38O00635 GSTA5-201ENST00000284562 845 ntAPPRIS P1 TSL 5 BASIC6.21□□□□□ -1.42
TRIM38O00635 OR4D5-201ENST00000307033 1095 ntAPPRIS P1 BASIC6.21□□□□□ -1.42
TRIM38O00635 SNORD16-201ENST00000362803 99 ntBASIC6.21□□□□□ -1.42
TRIM38O00635 HEATR1-201ENST00000366579 793 ntTSL 2 BASIC6.21□□□□□ -1.42
TRIM38O00635 DNAH14-203ENST00000366848 929 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 139.8 ms