Protein–RNA interactions for Protein: O00570

SOX1, Transcription factor SOX-1, humanhuman

Predicted RBP Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX1O00570 REV3L-203ENST00000368805 10461 ntAPPRIS P1 TSL 5 BASIC7.35□□□□□ -1.23
SOX1O00570 OAT-201ENST00000368845 2048 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
SOX1O00570 CU638689.4-201ENST00000623047 5990 ntTSL 5 BASIC7.35□□□□□ -1.23
SOX1O00570 C9orf135-AS1-201ENST00000439418 1375 ntTSL 2 BASIC7.35□□□□□ -1.23
SOX1O00570 PSG7-206ENST00000623675 1392 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
SOX1O00570 DNM1L-207ENST00000452533 4439 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
SOX1O00570 MAPK9-213ENST00000539014 1668 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
SOX1O00570 GON4L-201ENST00000271883 7138 ntAPPRIS P3 TSL 5 BASIC7.35□□□□□ -1.23
SOX1O00570 CTNNA2-218ENST00000541047 2870 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
SOX1O00570 RUNDC3A-AS1-202ENST00000588097 5203 ntTSL 5 BASIC7.35□□□□□ -1.23
SOX1O00570 AL353807.3-201ENST00000500626 2505 ntBASIC7.35□□□□□ -1.23
SOX1O00570 AC027279.1-201ENST00000568885 4284 ntBASIC7.35□□□□□ -1.23
SOX1O00570 ZC3H14-206ENST00000406216 1341 ntTSL 3 BASIC7.35□□□□□ -1.23
SOX1O00570 DGKB-205ENST00000406247 3257 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
SOX1O00570 RNU6-1251P-201ENST00000364502 107 ntBASIC7.35□□□□□ -1.23
SOX1O00570 RNU1-84P-201ENST00000365447 164 ntBASIC7.35□□□□□ -1.23
SOX1O00570 CFHR1-202ENST00000367424 1070 ntTSL 5 BASIC7.35□□□□□ -1.23
SOX1O00570 RNU6-1119P-201ENST00000384349 108 ntBASIC7.35□□□□□ -1.23
SOX1O00570 VDAC2P1-201ENST00000399358 958 ntBASIC7.35□□□□□ -1.23
SOX1O00570 IGBP1-AS2-201ENST00000403371 513 ntTSL 3 BASIC7.35□□□□□ -1.23
SOX1O00570 FAM183A-205ENST00000410048 500 ntTSL 3 BASIC7.35□□□□□ -1.23
SOX1O00570 LINC01442-201ENST00000414201 704 ntTSL 2 BASIC7.35□□□□□ -1.23
SOX1O00570 AC013472.2-201ENST00000416226 306 ntTSL 3 BASIC7.35□□□□□ -1.23
SOX1O00570 TRBV24OR9-2-201ENST00000416632 435 ntBASIC7.35□□□□□ -1.23
SOX1O00570 AL358394.1-201ENST00000422807 535 ntTSL 2 BASIC7.35□□□□□ -1.23
SOX1O00570 F10-AS1-201ENST00000424635 417 ntTSL 5 BASIC7.35□□□□□ -1.23
SOX1O00570 AL354977.2-201ENST00000430387 728 ntTSL 3 BASIC7.35□□□□□ -1.23
SOX1O00570 USP9YP35-201ENST00000435696 412 ntBASIC7.35□□□□□ -1.23
SOX1O00570 AC005808.1-201ENST00000444112 381 ntTSL 2 BASIC7.35□□□□□ -1.23
SOX1O00570 AC079612.2-201ENST00000446029 348 ntTSL 2 BASIC7.35□□□□□ -1.23
SOX1O00570 UBE2V1P7-201ENST00000446395 340 ntBASIC7.35□□□□□ -1.23
SOX1O00570 AL020997.1-201ENST00000446554 349 ntBASIC7.35□□□□□ -1.23
SOX1O00570 AL035530.1-201ENST00000446887 331 ntTSL 3 BASIC7.35□□□□□ -1.23
SOX1O00570 HRAT17-201ENST00000447785 547 ntTSL 4 BASIC7.35□□□□□ -1.23
SOX1O00570 AC013399.1-201ENST00000450311 418 ntBASIC7.35□□□□□ -1.23
SOX1O00570 RPL5P32-201ENST00000454085 879 ntBASIC7.35□□□□□ -1.23
SOX1O00570 CFTRP1-201ENST00000456646 183 ntBASIC7.35□□□□□ -1.23
SOX1O00570 AL138737.1-201ENST00000456896 1252 ntTSL 5 BASIC7.35□□□□□ -1.23
SOX1O00570 AC008591.1-201ENST00000503616 631 ntTSL 3 BASIC7.35□□□□□ -1.23
SOX1O00570 AC023794.2-201ENST00000504891 528 ntTSL 3 BASIC7.35□□□□□ -1.23
SOX1O00570 CTD-2350J17.1-201ENST00000509228 362 ntTSL 2 BASIC7.35□□□□□ -1.23
SOX1O00570 PGBD4P4-201ENST00000509673 613 ntBASIC7.35□□□□□ -1.23
SOX1O00570 LINC00967-201ENST00000517689 792 ntTSL 5 BASIC7.35□□□□□ -1.23
SOX1O00570 AC104109.4-202ENST00000518409 1082 ntTSL 2 BASIC7.35□□□□□ -1.23
SOX1O00570 DUXAP2-201ENST00000519198 589 ntBASIC7.35□□□□□ -1.23
SOX1O00570 AC090796.1-201ENST00000520370 567 ntTSL 4 BASIC7.35□□□□□ -1.23
SOX1O00570 AC011092.2-201ENST00000533659 586 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
SOX1O00570 AC140063.1-201ENST00000541343 259 ntBASIC7.35□□□□□ -1.23
SOX1O00570 MRPL42-203ENST00000547098 701 ntTSL 3 BASIC7.35□□□□□ -1.23
SOX1O00570 AC060809.1-201ENST00000559211 564 ntTSL 4 BASIC7.35□□□□□ -1.23
SOX1O00570 AC048382.2-201ENST00000560239 492 ntTSL 2 BASIC7.35□□□□□ -1.23
SOX1O00570 AC092078.2-201ENST00000560900 581 ntTSL 4 BASIC7.35□□□□□ -1.23
SOX1O00570 MIR1273E-201ENST00000581165 102 ntBASIC7.35□□□□□ -1.23
SOX1O00570 LAMTOR5-AS1-203ENST00000585330 463 ntTSL 2 BASIC7.35□□□□□ -1.23
SOX1O00570 AC020916.2-201ENST00000591242 360 ntBASIC7.35□□□□□ -1.23
SOX1O00570 AC027319.1-201ENST00000591657 511 ntTSL 3 BASIC7.35□□□□□ -1.23
SOX1O00570 AC092316.1-201ENST00000598703 297 ntTSL 5 BASIC7.35□□□□□ -1.23
SOX1O00570 AL356055.1-201ENST00000602528 446 ntBASIC7.35□□□□□ -1.23
SOX1O00570 HSPE1-MOB4-201ENST00000604458 890 ntAPPRIS P1 TSL 3 BASIC7.35□□□□□ -1.23
SOX1O00570 SUMO2P14-201ENST00000604488 293 ntBASIC7.35□□□□□ -1.23
SOX1O00570 AC128687.1-201ENST00000605304 619 ntBASIC7.35□□□□□ -1.23
SOX1O00570 RPSAP75-201ENST00000605848 301 ntBASIC7.35□□□□□ -1.23
SOX1O00570 U1.41-201ENST00000617626 165 ntBASIC7.35□□□□□ -1.23
SOX1O00570 AC139769.3-201ENST00000618383 175 ntBASIC7.35□□□□□ -1.23
SOX1O00570 BRCC3-209ENST00000620502 882 ntAPPRIS ALT2 TSL 5 BASIC7.35□□□□□ -1.23
SOX1O00570 AC099329.1-203ENST00000629885 767 ntTSL 5 BASIC7.35□□□□□ -1.23
SOX1O00570 RPL12P38-202ENST00000588627 2319 ntBASIC7.35□□□□□ -1.23
SOX1O00570 CALU-203ENST00000479257 2572 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
SOX1O00570 UTY-213ENST00000612274 6586 ntAPPRIS ALT2 TSL 1 (best) BASIC7.35□□□□□ -1.23
SOX1O00570 RGS6-205ENST00000406236 1476 ntAPPRIS ALT1 TSL 1 (best) BASIC7.35□□□□□ -1.23
SOX1O00570 PIGN-233ENST00000639342 4305 ntTSL 5 BASIC7.35□□□□□ -1.23
SOX1O00570 PRDM2-201ENST00000235372 7957 ntAPPRIS P4 TSL 1 (best) BASIC7.35□□□□□ -1.23
SOX1O00570 HMGXB4-201ENST00000216106 4047 ntAPPRIS P1 TSL 5 BASIC7.35□□□□□ -1.23
SOX1O00570 LAMP2-202ENST00000371335 4030 ntAPPRIS ALT2 TSL 1 (best) BASIC7.35□□□□□ -1.23
SOX1O00570 SUN3-201ENST00000297325 1416 ntAPPRIS P1 TSL 5 BASIC7.35□□□□□ -1.23
SOX1O00570 CLEC2D-203ENST00000290855 5279 ntAPPRIS P3 TSL 1 (best) BASIC7.35□□□□□ -1.23
SOX1O00570 FARSB-201ENST00000281828 3369 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
SOX1O00570 LINC02047-201ENST00000494761 1371 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
SOX1O00570 MTND4P29-201ENST00000503122 1372 ntBASIC7.34□□□□□ -1.23
SOX1O00570 AP005139.1-201ENST00000580702 1647 ntBASIC7.34□□□□□ -1.23
SOX1O00570 TSC22D1-212ENST00000611198 2877 ntTSL 2 BASIC7.34□□□□□ -1.23
SOX1O00570 MGAM-208ENST00000549489 6525 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
SOX1O00570 ZNF675-201ENST00000359788 2301 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
SOX1O00570 BMPR1B-201ENST00000264568 1807 ntAPPRIS P1 TSL 2 BASIC7.34□□□□□ -1.23
SOX1O00570 NUMB-229ENST00000557597 3547 ntAPPRIS P3 TSL 1 (best) BASIC7.34□□□□□ -1.23
SOX1O00570 STK32B-207ENST00000512636 3272 ntTSL 5 BASIC7.34□□□□□ -1.23
SOX1O00570 TMEM192-201ENST00000306480 10012 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
SOX1O00570 DICER1-214ENST00000556045 2776 ntTSL 2 BASIC7.34□□□□□ -1.23
SOX1O00570 ARHGEF7-208ENST00000426073 4921 ntAPPRIS P3 TSL 1 (best) BASIC7.34□□□□□ -1.23
SOX1O00570 SLC26A5-206ENST00000393727 2270 ntAPPRIS ALT1 TSL 1 (best) BASIC7.34□□□□□ -1.23
SOX1O00570 CFAP61-205ENST00000377306 2017 ntTSL 5 BASIC7.34□□□□□ -1.23
SOX1O00570 PDLIM5-221ENST00000542407 2979 ntAPPRIS ALT1 TSL 1 (best) BASIC7.34□□□□□ -1.23
SOX1O00570 C11orf65-208ENST00000615746 2711 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
SOX1O00570 MCM8-201ENST00000265187 3442 ntAPPRIS ALT2 TSL 1 (best) BASIC7.34□□□□□ -1.23
SOX1O00570 COL21A1-203ENST00000370819 4094 ntAPPRIS ALT1 TSL 1 (best) BASIC7.34□□□□□ -1.23
SOX1O00570 PARP2-204ENST00000527915 1980 ntTSL 2 BASIC7.34□□□□□ -1.23
SOX1O00570 ORM1-201ENST00000259396 802 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
SOX1O00570 C1orf100-201ENST00000308105 579 ntAPPRIS P1 TSL 2 BASIC7.34□□□□□ -1.23
SOX1O00570 OR6N2-201ENST00000339258 954 ntAPPRIS P1 BASIC7.34□□□□□ -1.23
SOX1O00570 SNORA74A-201ENST00000364089 198 ntBASIC7.34□□□□□ -1.23
Retrieved 100 of 98,524 protein–RNA pairs in 72.3 ms