Protein–RNA interactions for Protein: Q9Y5Y9

SCN10A, Sodium channel protein type 10 subunit alpha, humanhuman

Predictions only

Length 1,956 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN10AQ9Y5Y9 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC21.66■■□□□ 1.06
SCN10AQ9Y5Y9 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC21.66■■□□□ 1.06
SCN10AQ9Y5Y9 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC21.66■■□□□ 1.06
SCN10AQ9Y5Y9 AP001271.2-201ENST00000624018 1556 ntBASIC21.66■■□□□ 1.06
SCN10AQ9Y5Y9 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC21.66■■□□□ 1.06
SCN10AQ9Y5Y9 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
SCN10AQ9Y5Y9 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
SCN10AQ9Y5Y9 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
SCN10AQ9Y5Y9 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC21.66■■□□□ 1.06
SCN10AQ9Y5Y9 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
SCN10AQ9Y5Y9 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC21.65■■□□□ 1.06
SCN10AQ9Y5Y9 DERL1-203ENST00000419562 918 ntTSL 2 BASIC21.65■■□□□ 1.06
SCN10AQ9Y5Y9 LINC01238-205ENST00000567549 1107 ntBASIC21.65■■□□□ 1.06
SCN10AQ9Y5Y9 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
SCN10AQ9Y5Y9 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
SCN10AQ9Y5Y9 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC21.65■■□□□ 1.06
SCN10AQ9Y5Y9 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC21.65■■□□□ 1.06
SCN10AQ9Y5Y9 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
SCN10AQ9Y5Y9 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
SCN10AQ9Y5Y9 MOK-225ENST00000522867 1883 ntTSL 5 BASIC21.65■■□□□ 1.06
SCN10AQ9Y5Y9 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
SCN10AQ9Y5Y9 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC21.65■■□□□ 1.06
SCN10AQ9Y5Y9 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC21.65■■□□□ 1.06
SCN10AQ9Y5Y9 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
SCN10AQ9Y5Y9 LINC00565-201ENST00000562710 2331 ntBASIC21.64■■□□□ 1.06
SCN10AQ9Y5Y9 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
SCN10AQ9Y5Y9 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
SCN10AQ9Y5Y9 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC21.64■■□□□ 1.06
SCN10AQ9Y5Y9 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC21.64■■□□□ 1.06
SCN10AQ9Y5Y9 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC21.64■■□□□ 1.05
SCN10AQ9Y5Y9 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC21.64■■□□□ 1.05
SCN10AQ9Y5Y9 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC21.64■■□□□ 1.05
SCN10AQ9Y5Y9 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
SCN10AQ9Y5Y9 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC21.64■■□□□ 1.05
SCN10AQ9Y5Y9 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
SCN10AQ9Y5Y9 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
SCN10AQ9Y5Y9 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC21.64■■□□□ 1.05
SCN10AQ9Y5Y9 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC21.64■■□□□ 1.05
SCN10AQ9Y5Y9 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
SCN10AQ9Y5Y9 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.05
SCN10AQ9Y5Y9 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC21.64■■□□□ 1.05
SCN10AQ9Y5Y9 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC21.64■■□□□ 1.05
SCN10AQ9Y5Y9 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC21.64■■□□□ 1.05
SCN10AQ9Y5Y9 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
SCN10AQ9Y5Y9 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
SCN10AQ9Y5Y9 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
SCN10AQ9Y5Y9 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
SCN10AQ9Y5Y9 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
SCN10AQ9Y5Y9 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC21.63■■□□□ 1.05
SCN10AQ9Y5Y9 CCR12P-201ENST00000446203 998 ntBASIC21.63■■□□□ 1.05
SCN10AQ9Y5Y9 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC21.63■■□□□ 1.05
SCN10AQ9Y5Y9 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC21.63■■□□□ 1.05
SCN10AQ9Y5Y9 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC21.63■■□□□ 1.05
SCN10AQ9Y5Y9 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC21.63■■□□□ 1.05
SCN10AQ9Y5Y9 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC21.63■■□□□ 1.05
SCN10AQ9Y5Y9 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
SCN10AQ9Y5Y9 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC21.63■■□□□ 1.05
SCN10AQ9Y5Y9 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
SCN10AQ9Y5Y9 AL031133.1-201ENST00000406807 723 ntBASIC21.63■■□□□ 1.05
SCN10AQ9Y5Y9 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC21.63■■□□□ 1.05
SCN10AQ9Y5Y9 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC21.63■■□□□ 1.05
SCN10AQ9Y5Y9 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
SCN10AQ9Y5Y9 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
SCN10AQ9Y5Y9 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
SCN10AQ9Y5Y9 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC21.62■■□□□ 1.05
SCN10AQ9Y5Y9 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
SCN10AQ9Y5Y9 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC21.62■■□□□ 1.05
SCN10AQ9Y5Y9 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
SCN10AQ9Y5Y9 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC21.62■■□□□ 1.05
SCN10AQ9Y5Y9 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC21.62■■□□□ 1.05
SCN10AQ9Y5Y9 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC21.62■■□□□ 1.05
SCN10AQ9Y5Y9 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC21.62■■□□□ 1.05
SCN10AQ9Y5Y9 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC21.62■■□□□ 1.05
SCN10AQ9Y5Y9 AL023803.3-201ENST00000615559 522 ntBASIC21.62■■□□□ 1.05
SCN10AQ9Y5Y9 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
SCN10AQ9Y5Y9 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
SCN10AQ9Y5Y9 FEM1AP1-201ENST00000431297 1995 ntBASIC21.62■■□□□ 1.05
SCN10AQ9Y5Y9 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC21.62■■□□□ 1.05
SCN10AQ9Y5Y9 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC21.62■■□□□ 1.05
SCN10AQ9Y5Y9 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
SCN10AQ9Y5Y9 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC21.61■■□□□ 1.05
SCN10AQ9Y5Y9 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
SCN10AQ9Y5Y9 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
SCN10AQ9Y5Y9 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC21.61■■□□□ 1.05
SCN10AQ9Y5Y9 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC21.61■■□□□ 1.05
SCN10AQ9Y5Y9 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC21.61■■□□□ 1.05
SCN10AQ9Y5Y9 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC21.61■■□□□ 1.05
SCN10AQ9Y5Y9 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC21.61■■□□□ 1.05
SCN10AQ9Y5Y9 AC116562.4-202ENST00000641738 218 ntBASIC21.61■■□□□ 1.05
SCN10AQ9Y5Y9 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
SCN10AQ9Y5Y9 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC21.61■■□□□ 1.05
SCN10AQ9Y5Y9 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
SCN10AQ9Y5Y9 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
SCN10AQ9Y5Y9 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC21.61■■□□□ 1.05
SCN10AQ9Y5Y9 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC21.61■■□□□ 1.05
SCN10AQ9Y5Y9 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC21.61■■□□□ 1.05
SCN10AQ9Y5Y9 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
SCN10AQ9Y5Y9 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
SCN10AQ9Y5Y9 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC21.61■■□□□ 1.05
SCN10AQ9Y5Y9 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 18.5 ms