Protein–RNA interactions for Protein: Q9UPM8

AP4E1, AP-4 complex subunit epsilon-1, humanhuman

Predictions only

Length 1,137 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP4E1Q9UPM8 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
AP4E1Q9UPM8 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
AP4E1Q9UPM8 AP003097.1-201ENST00000530657 1135 ntBASIC20.42■□□□□ 0.86
AP4E1Q9UPM8 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
AP4E1Q9UPM8 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC20.42■□□□□ 0.86
AP4E1Q9UPM8 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC20.42■□□□□ 0.86
AP4E1Q9UPM8 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
AP4E1Q9UPM8 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
AP4E1Q9UPM8 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
AP4E1Q9UPM8 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
AP4E1Q9UPM8 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
AP4E1Q9UPM8 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC20.42■□□□□ 0.86
AP4E1Q9UPM8 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC20.41■□□□□ 0.86
AP4E1Q9UPM8 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
AP4E1Q9UPM8 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
AP4E1Q9UPM8 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
AP4E1Q9UPM8 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC20.41■□□□□ 0.86
AP4E1Q9UPM8 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
AP4E1Q9UPM8 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
AP4E1Q9UPM8 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
AP4E1Q9UPM8 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
AP4E1Q9UPM8 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
AP4E1Q9UPM8 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
AP4E1Q9UPM8 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
AP4E1Q9UPM8 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
AP4E1Q9UPM8 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC20.41■□□□□ 0.86
AP4E1Q9UPM8 POM121L13P-201ENST00000422362 380 ntBASIC20.41■□□□□ 0.86
AP4E1Q9UPM8 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC20.41■□□□□ 0.86
AP4E1Q9UPM8 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC20.41■□□□□ 0.86
AP4E1Q9UPM8 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC20.41■□□□□ 0.86
AP4E1Q9UPM8 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC20.41■□□□□ 0.86
AP4E1Q9UPM8 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC20.41■□□□□ 0.86
AP4E1Q9UPM8 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC20.41■□□□□ 0.86
AP4E1Q9UPM8 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC20.41■□□□□ 0.86
AP4E1Q9UPM8 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC20.41■□□□□ 0.86
AP4E1Q9UPM8 TBCB-214ENST00000629269 413 ntTSL 5 BASIC20.41■□□□□ 0.86
AP4E1Q9UPM8 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC20.41■□□□□ 0.86
AP4E1Q9UPM8 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
AP4E1Q9UPM8 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
AP4E1Q9UPM8 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC20.41■□□□□ 0.86
AP4E1Q9UPM8 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
AP4E1Q9UPM8 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC20.41■□□□□ 0.86
AP4E1Q9UPM8 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC20.41■□□□□ 0.86
AP4E1Q9UPM8 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
AP4E1Q9UPM8 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC20.4■□□□□ 0.86
AP4E1Q9UPM8 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
AP4E1Q9UPM8 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC20.4■□□□□ 0.86
AP4E1Q9UPM8 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC20.4■□□□□ 0.86
AP4E1Q9UPM8 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
AP4E1Q9UPM8 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
AP4E1Q9UPM8 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC20.4■□□□□ 0.86
AP4E1Q9UPM8 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC20.4■□□□□ 0.86
AP4E1Q9UPM8 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
AP4E1Q9UPM8 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
AP4E1Q9UPM8 PNN-205ENST00000556530 601 ntTSL 2 BASIC20.4■□□□□ 0.86
AP4E1Q9UPM8 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
AP4E1Q9UPM8 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC20.4■□□□□ 0.86
AP4E1Q9UPM8 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC20.4■□□□□ 0.86
AP4E1Q9UPM8 AL121829.2-201ENST00000620908 328 ntBASIC20.4■□□□□ 0.86
AP4E1Q9UPM8 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
AP4E1Q9UPM8 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC20.4■□□□□ 0.86
AP4E1Q9UPM8 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
AP4E1Q9UPM8 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
AP4E1Q9UPM8 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
AP4E1Q9UPM8 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
AP4E1Q9UPM8 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
AP4E1Q9UPM8 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC20.39■□□□□ 0.85
AP4E1Q9UPM8 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC20.39■□□□□ 0.85
AP4E1Q9UPM8 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC20.39■□□□□ 0.85
AP4E1Q9UPM8 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC20.39■□□□□ 0.85
AP4E1Q9UPM8 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC20.39■□□□□ 0.85
AP4E1Q9UPM8 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC20.39■□□□□ 0.85
AP4E1Q9UPM8 AC026366.1-201ENST00000488803 879 ntBASIC20.39■□□□□ 0.85
AP4E1Q9UPM8 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
AP4E1Q9UPM8 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
AP4E1Q9UPM8 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
AP4E1Q9UPM8 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.85
AP4E1Q9UPM8 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC20.39■□□□□ 0.85
AP4E1Q9UPM8 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
AP4E1Q9UPM8 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
AP4E1Q9UPM8 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
AP4E1Q9UPM8 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.85
AP4E1Q9UPM8 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
AP4E1Q9UPM8 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
AP4E1Q9UPM8 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
AP4E1Q9UPM8 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
AP4E1Q9UPM8 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC20.38■□□□□ 0.85
AP4E1Q9UPM8 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC20.38■□□□□ 0.85
AP4E1Q9UPM8 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
AP4E1Q9UPM8 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
AP4E1Q9UPM8 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC20.38■□□□□ 0.85
AP4E1Q9UPM8 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
AP4E1Q9UPM8 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
AP4E1Q9UPM8 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
AP4E1Q9UPM8 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC20.38■□□□□ 0.85
AP4E1Q9UPM8 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC20.38■□□□□ 0.85
AP4E1Q9UPM8 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC20.38■□□□□ 0.85
AP4E1Q9UPM8 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC20.38■□□□□ 0.85
AP4E1Q9UPM8 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
AP4E1Q9UPM8 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC20.38■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms